FFCP PHASE1:Mm9::chr11:96160360..96160397,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15414|HGNC=|MCL_coexpression_id=2010|UniProt=A2AA00,P09023|association_with_transcript=-87bp_to_NM_008269,uc007lbt.1_5end|description=CAGE_peak_3_at_Hoxb6_5end|id=chr11:96160360..96160397,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.56e-14!21;UBERON:0005157!6.32e-12!27;UBERON:0002113!1.76e-10!14;UBERON:0003918!1.76e-10!14;UBERON:0005095!1.76e-10!14;UBERON:0007687!1.76e-10!14;UBERON:0001008!1.59e-09!17;UBERON:0006554!2.57e-09!16;UBERON:0005177!2.84e-09!85;UBERON:0002100!1.43e-08!98;UBERON:0002342!2.73e-08!10;UBERON:0005062!2.73e-08!10;UBERON:0003064!1.12e-07!14;UBERON:0002048!5.15e-07!14;UBERON:0000117!5.15e-07!14;UBERON:0000171!5.15e-07!14;UBERON:0000170!5.15e-07!14;UBERON:0005597!5.15e-07!14;UBERON:0000118!5.15e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.19e-22,21;UBERON:0002113,6.03e-16,14;UBERON:0003918,6.03e-16,14;UBERON:0011143,6.03e-16,14;UBERON:0005095,6.03e-16,14;UBERON:0007687,6.03e-16,14;UBERON:0006554,1.87e-11,18;UBERON:0001008,1.24e-10,19;UBERON:0002240,1.44e-09,6;UBERON:0005174,1.44e-09,6;UBERON:0001137,1.44e-09,6;UBERON:0003064,1.70e-09,14;UBERON:0009569,4.12e-09,66;UBERON:0002369,1.40e-08,7;UBERON:0006858,1.40e-08,7;UBERON:0001948,3.28e-08,5;UBERON:0002315,3.28e-08,5;UBERON:0003103,8.46e-08,43;UBERON:0003076,2.81e-07,12;UBERON:0003057,2.81e-07,12;UBERON:0002100,5.68e-07,90;UBERON:0005177,7.04e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,4.35920804243913,3.85448179539531,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8534080798244,19.6573001446936,0,0,0,0,0,0,0,0,0,0,0,0,18.8562294703147,19.0778052270798,23.8591290656385,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.68510327831436,0,6.38301197978747,4.8575891494518,3.34912026143355,2.30615497256059,4.37095657602605,4.58595957829249,3.39299796590124,0.247194967734374,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52759045775474,6.71797641294502,24.7668303265001,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.703578179943289,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69234151177515,3.0190767341857,2.57734922644187,0.80673409849337,1.33426826306922,0.760902504450237,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,8.15571974098251,5.36968009265725,4.50830942692322,5.29493452397817,5.43066964069352,4.76923575254166,2.08680572510049,3.54264355151045,2.04098346193787,2.09775178667061,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,4.9267767060326,2.93336957595647,1.86719594352707,0.938760993154008,0.502518772325447,0.714130922658041,0.975668239288994,0.945810864637146,3.10050565508285,2.23236676120482,1.80249646187312,1.20879487306127,2.02508682014116,0,0,0,0,10.1146871692309,8.20481806145422,0,0.252470927204373,15.4599027513966,16.3984272604588,18.9572590004863,0,0,0.566153061577665,6.07216052512342,3.50707029493574,3.16230222357219,0,0.99358059645788,1.06839362200353,0.488660878060728,2.63952196756057,0,1.21390318077491,0.906970670894253,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0.441056796109924,0.65954501176592,0.322928853391811,0.542816324353403,0.477489376012546,0.656563598980245,0,21.5093350332191,0,0.412773735926445,0,0,0,0,0,0,0,0,3.32152793260192,0.813277868507395,0.86404272657441,1.04544148007234,0.87345025498471,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0,0,0,0.387479470433193,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,1.64836461840539,0.857473516316263,6.01886524842436,0,0,0,0,0,0,0,0,0,0,6.33102820263478,8.37952234142165,3.75613932659095,2.18796045361465,1.88651846365184,0.367687016900028,1.11123363900808,0.824140228955577,0,1.26348605881899,0.50695859978048,0.754505365544305,1.21733959710847,0.768301828858431,1.14870937911227,1.42888107384922,1.0429589335037,1.15745532278223,0,0.883193520806384,1.71434626192708,1.06485483695602,0.715308569841963,1.59881058295561,0.941093804153306,1.09998990259179,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,0.711810108745045,0.985044823755635,1.22769312950907,0.619747364743864,0.964533054905707,1.99848462350357,1.16965804222704,1.07435527024149,1.53030665655075,0.882365676478062,0.927471342481686|short_description=p3@Hoxb6}} | ||
|EntrezGene=15414 | |||
|HGNC= | |||
|MCL_coexpression_id=2010 | |||
|UniProt=A2AA00,P09023 | |||
|association_with_transcript=-87bp_to_NM_008269,uc007lbt.1_5end | |||
|description=CAGE_peak_3_at_Hoxb6_5end | |||
|id=chr11:96160360..96160397,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.56e-14!21;UBERON:0005157!6.32e-12!27;UBERON:0002113!1.76e-10!14;UBERON:0003918!1.76e-10!14;UBERON:0005095!1.76e-10!14;UBERON:0007687!1.76e-10!14;UBERON:0001008!1.59e-09!17;UBERON:0006554!2.57e-09!16;UBERON:0005177!2.84e-09!85;UBERON:0002100!1.43e-08!98;UBERON:0002342!2.73e-08!10;UBERON:0005062!2.73e-08!10;UBERON:0003064!1.12e-07!14;UBERON:0002048!5.15e-07!14;UBERON:0000117!5.15e-07!14;UBERON:0000171!5.15e-07!14;UBERON:0000170!5.15e-07!14;UBERON:0005597!5.15e-07!14;UBERON:0000118!5.15e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.19e-22,21;UBERON:0002113,6.03e-16,14;UBERON:0003918,6.03e-16,14;UBERON:0011143,6.03e-16,14;UBERON:0005095,6.03e-16,14;UBERON:0007687,6.03e-16,14;UBERON:0006554,1.87e-11,18;UBERON:0001008,1.24e-10,19;UBERON:0002240,1.44e-09,6;UBERON:0005174,1.44e-09,6;UBERON:0001137,1.44e-09,6;UBERON:0003064,1.70e-09,14;UBERON:0009569,4.12e-09,66;UBERON:0002369,1.40e-08,7;UBERON:0006858,1.40e-08,7;UBERON:0001948,3.28e-08,5;UBERON:0002315,3.28e-08,5;UBERON:0003103,8.46e-08,43;UBERON:0003076,2.81e-07,12;UBERON:0003057,2.81e-07,12;UBERON:0002100,5.68e-07,90;UBERON:0005177,7.04e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,4.35920804243913,3.85448179539531,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8534080798244,19.6573001446936,0,0,0,0,0,0,0,0,0,0,0,0,18.8562294703147,19.0778052270798,23.8591290656385,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.68510327831436,0,6.38301197978747,4.8575891494518,3.34912026143355,2.30615497256059,4.37095657602605,4.58595957829249,3.39299796590124,0.247194967734374,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52759045775474,6.71797641294502,24.7668303265001,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.703578179943289,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69234151177515,3.0190767341857,2.57734922644187,0.80673409849337,1.33426826306922,0.760902504450237,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,8.15571974098251,5.36968009265725,4.50830942692322,5.29493452397817,5.43066964069352,4.76923575254166,2.08680572510049,3.54264355151045,2.04098346193787,2.09775178667061,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,4.9267767060326,2.93336957595647,1.86719594352707,0.938760993154008,0.502518772325447,0.714130922658041,0.975668239288994,0.945810864637146,3.10050565508285,2.23236676120482,1.80249646187312,1.20879487306127,2.02508682014116,0,0,0,0,10.1146871692309,8.20481806145422,0,0.252470927204373,15.4599027513966,16.3984272604588,18.9572590004863,0,0,0.566153061577665,6.07216052512342,3.50707029493574,3.16230222357219,0,0.99358059645788,1.06839362200353,0.488660878060728,2.63952196756057,0,1.21390318077491,0.906970670894253,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0.441056796109924,0.65954501176592,0.322928853391811,0.542816324353403,0.477489376012546,0.656563598980245,0,21.5093350332191,0,0.412773735926445,0,0,0,0,0,0,0,0,3.32152793260192,0.813277868507395,0.86404272657441,1.04544148007234,0.87345025498471,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0,0,0,0.387479470433193,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,1.64836461840539,0.857473516316263,6.01886524842436,0,0,0,0,0,0,0,0,0,0,6.33102820263478,8.37952234142165,3.75613932659095,2.18796045361465,1.88651846365184,0.367687016900028,1.11123363900808,0.824140228955577,0,1.26348605881899,0.50695859978048,0.754505365544305,1.21733959710847,0.768301828858431,1.14870937911227,1.42888107384922,1.0429589335037,1.15745532278223,0,0.883193520806384,1.71434626192708,1.06485483695602,0.715308569841963,1.59881058295561,0.941093804153306,1.09998990259179,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,0.711810108745045,0.985044823755635,1.22769312950907,0.619747364743864,0.964533054905707,1.99848462350357,1.16965804222704,1.07435527024149,1.53030665655075,0.882365676478062,0.927471342481686 | |||
|short_description=p3@Hoxb6 | |||
}} |
Revision as of 21:39, 12 September 2013
Short description: | p3@Hoxb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2010 |
Association with transcript: | -87bp_to_NM_008269, uc007lbt.1_5end |
EntrezGene: | Hoxb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.19e-22 | 21 |
kidney | 6.03e-16 | 14 |
kidney mesenchyme | 6.03e-16 | 14 |
upper urinary tract | 6.03e-16 | 14 |
kidney rudiment | 6.03e-16 | 14 |
kidney field | 6.03e-16 | 14 |
urinary system structure | 1.87e-11 | 18 |
renal system | 1.24e-10 | 19 |
spinal cord | 1.44e-09 | 6 |
dorsal region element | 1.44e-09 | 6 |
dorsum | 1.44e-09 | 6 |
intermediate mesoderm | 1.70e-09 | 14 |
subdivision of trunk | 4.12e-09 | 66 |
adrenal gland | 1.40e-08 | 7 |
adrenal/interrenal gland | 1.40e-08 | 7 |
regional part of spinal cord | 3.28e-08 | 5 |
gray matter of spinal cord | 3.28e-08 | 5 |
compound organ | 8.46e-08 | 43 |
posterior neural tube | 2.81e-07 | 12 |
chordal neural plate | 2.81e-07 | 12 |
trunk | 5.68e-07 | 90 |
trunk region element | 7.04e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.