FFCP PHASE1:Mm9::chr11:96132930..96132971,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=249|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:96132930..96132971,+|id=chr11:96132930..96132971,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,4.07e-15,3;CL:0002611,1.47e-10,2;CL:0000192,7.85e-07,3;CL:0000359,7.85e-07,3;CL:0002539,7.85e-07,3;CL:0000514,7.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!3.44e-17!21;UBERON:0002113!3.70e-11!14;UBERON:0003918!3.70e-11!14;UBERON:0005095!3.70e-11!14;UBERON:0007687!3.70e-11!14;UBERON:0006554!9.13e-11!16;UBERON:0003064!1.88e-10!14;UBERON:0001008!6.85e-10!17;UBERON:0002369!1.75e-09!7;UBERON:0006858!1.75e-09!7;UBERON:0002240!6.43e-09!6;UBERON:0005174!6.43e-09!6;UBERON:0001137!6.43e-09!6;UBERON:0001948!1.00e-07!5;UBERON:0002315!1.00e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.00e-30,7;UBERON:0006858,2.00e-30,7;UBERON:0002240,2.34e-28,6;UBERON:0005174,2.34e-28,6;UBERON:0001137,2.34e-28,6;UBERON:0001948,5.23e-24,5;UBERON:0002315,5.23e-24,5;UBERON:0003064,3.79e-19,14;UBERON:0002257,4.07e-15,3;UBERON:0003076,5.95e-14,12;UBERON:0003057,5.95e-14,12;UBERON:0002256,1.47e-10,2;UBERON:0000489,3.39e-10,21;UBERON:0005256,4.23e-10,45;UBERON:0003104,5.34e-07,61;UBERON:0009142,5.34e-07,61;UBERON:0001135,7.85e-07,3;UBERON:0004237,7.85e-07,3;UBERON:0004695,7.85e-07,3;UBERON:0002111,7.85e-07,3;UBERON:0004178,7.85e-07,3|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.4192770370732,3.12029478674859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28432165688368,8.83474163806454,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,8.82704420954438,17.7079473534036,0,0,0,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,4.75014845007439,1.21439728736295,1.52232739156071,2.30615497256059,2.11011696773672,1.76383060703557,5.6549966098354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.387904974335251,0.631222379012867,0.758838445491087,0.295220295959204,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,1.21443210502468,0.292255857911312,0.395287777946524,0,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.798049746802062,0.682934423016537,0.972426868273176,0,0.183843508450014,0.222246727801615,0,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.619747364743864,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr11:96132930..96132971,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:96132930..96132971,+ | |||
|id=chr11:96132930..96132971,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.07e-15,3;CL:0002611,1.47e-10,2;CL:0000192,7.85e-07,3;CL:0000359,7.85e-07,3;CL:0002539,7.85e-07,3;CL:0000514,7.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.44e-17!21;UBERON:0002113!3.70e-11!14;UBERON:0003918!3.70e-11!14;UBERON:0005095!3.70e-11!14;UBERON:0007687!3.70e-11!14;UBERON:0006554!9.13e-11!16;UBERON:0003064!1.88e-10!14;UBERON:0001008!6.85e-10!17;UBERON:0002369!1.75e-09!7;UBERON:0006858!1.75e-09!7;UBERON:0002240!6.43e-09!6;UBERON:0005174!6.43e-09!6;UBERON:0001137!6.43e-09!6;UBERON:0001948!1.00e-07!5;UBERON:0002315!1.00e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.00e-30,7;UBERON:0006858,2.00e-30,7;UBERON:0002240,2.34e-28,6;UBERON:0005174,2.34e-28,6;UBERON:0001137,2.34e-28,6;UBERON:0001948,5.23e-24,5;UBERON:0002315,5.23e-24,5;UBERON:0003064,3.79e-19,14;UBERON:0002257,4.07e-15,3;UBERON:0003076,5.95e-14,12;UBERON:0003057,5.95e-14,12;UBERON:0002256,1.47e-10,2;UBERON:0000489,3.39e-10,21;UBERON:0005256,4.23e-10,45;UBERON:0003104,5.34e-07,61;UBERON:0009142,5.34e-07,61;UBERON:0001135,7.85e-07,3;UBERON:0004237,7.85e-07,3;UBERON:0004695,7.85e-07,3;UBERON:0002111,7.85e-07,3;UBERON:0004178,7.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.4192770370732,3.12029478674859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28432165688368,8.83474163806454,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,8.82704420954438,17.7079473534036,0,0,0,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,4.75014845007439,1.21439728736295,1.52232739156071,2.30615497256059,2.11011696773672,1.76383060703557,5.6549966098354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.387904974335251,0.631222379012867,0.758838445491087,0.295220295959204,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,1.21443210502468,0.292255857911312,0.395287777946524,0,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.798049746802062,0.682934423016537,0.972426868273176,0,0.183843508450014,0.222246727801615,0,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.619747364743864,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr11:96132930..96132971,+ | |||
}} |
Revision as of 21:38, 12 September 2013
Short description: | p@chr11:96132930..96132971, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96132930..96132971, + |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.07e-15 | 3 |
neuron of the dorsal spinal cord | 1.47e-10 | 2 |
smooth muscle cell | 7.85e-07 | 3 |
vascular associated smooth muscle cell | 7.85e-07 | 3 |
aortic smooth muscle cell | 7.85e-07 | 3 |
smooth muscle myoblast | 7.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.00e-30 | 7 |
adrenal/interrenal gland | 2.00e-30 | 7 |
spinal cord | 2.34e-28 | 6 |
dorsal region element | 2.34e-28 | 6 |
dorsum | 2.34e-28 | 6 |
regional part of spinal cord | 5.23e-24 | 5 |
gray matter of spinal cord | 5.23e-24 | 5 |
intermediate mesoderm | 3.79e-19 | 14 |
ventral horn of spinal cord | 4.07e-15 | 3 |
posterior neural tube | 5.95e-14 | 12 |
chordal neural plate | 5.95e-14 | 12 |
dorsal horn of spinal cord | 1.47e-10 | 2 |
cavitated compound organ | 3.39e-10 | 21 |
trunk mesenchyme | 4.23e-10 | 45 |
mesenchyme | 5.34e-07 | 61 |
entire embryonic mesenchyme | 5.34e-07 | 61 |
smooth muscle tissue | 7.85e-07 | 3 |
blood vessel smooth muscle | 7.85e-07 | 3 |
arterial system smooth muscle | 7.85e-07 | 3 |
artery smooth muscle tissue | 7.85e-07 | 3 |
aorta smooth muscle tissue | 7.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.