FFCP PHASE1:Hg19::chr3:124732278..124732290,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57493|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29227|TSSclassifier=S|UniProt=Q9ULI3|association_with_transcript=89bp_to_BC067235_5end|coexpression_cluster_id=C769|description=CAGE_peak_11_at_HEG1_5end|id=chr3:124732278..124732290,-|ontology_enrichment_celltype=CL:0000077!1.15e-09!19;CL:0000057!2.12e-09!75;CL:0000055!1.98e-07!180|ontology_enrichment_celltype_v019=CL:0000077;1.35e-14;19!CL:1000306;5.98e-11;4!CL:0002547;5.98e-11;4!CL:0002579;1.87e-09;3!CL:0002615;2.85e-08;3!CL:0000632;2.85e-08;3|ontology_enrichment_celltype_v019_2=CL:0000077,6.85e-15,19;CL:1000306,5.64e-11,4;CL:0002547,5.64e-11,4;CL:0002579,1.98e-09,3;CL:0002615,2.42e-08,3;CL:0000632,2.96e-08,3;CL:0000222,5.66e-07,121|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.33e-08!57|ontology_enrichment_uberon_v019=UBERON:0004457;3.02e-18;9!UBERON:0000042;3.02e-18;9!UBERON:0003688;5.22e-16;6!UBERON:0002358;5.22e-16;6!UBERON:0003684;5.22e-16;6!UBERON:0001178;5.22e-16;6!UBERON:0004797;5.98e-11;4!UBERON:0000415;5.98e-11;4!UBERON:0007240;5.98e-11;4!UBERON:0005742;5.98e-11;4!UBERON:0005734;5.98e-11;4!UBERON:0004664;5.98e-11;4!UBERON:0004663;5.98e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.65e-16,6;UBERON:0002358,4.65e-16,6;UBERON:0003684,4.65e-16,6;UBERON:0001178,4.65e-16,6;UBERON:0004457,2.76e-13,12;UBERON:0000042,2.76e-13,12;UBERON:0000415,5.64e-11,4;UBERON:0007240,5.64e-11,4;UBERON:0005742,5.64e-11,4;UBERON:0005734,5.64e-11,4;UBERON:0004664,5.64e-11,4;UBERON:0004663,5.64e-11,4;UBERON:0004923,2.72e-07,66|phase1_expression=0.726713517082227,0.856402095563933,1.55049844505568,2.00146596706261,1.34088328328186,1.74467704820074,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0,0,0.684372125364421,0.376627918784408,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.797854630486527,0,0,0,0,1.00499466102697,0,0.65156653411535,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.383587685530591,1.44575660953827,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,1.33037638477538,1.05401742831751,0.261958150995425,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,3.47880366186723,1.51956613997496,1.19168262731897,8.60509862246441,2.4826786753885,0,1.06748995729705,1.2333377420858,0.933633106199299,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0,1.4351170855109,0.213557388818567,0.635795703478686,0.600182192168805,0.515262646192195,0.772921620136887,0.744467425326359,0.506328996723799,0.292311015483596,1.7670364197088,0.368199594569197,0.80823028409406,0.710019185033229,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0.36497735907583,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0,0.441463099414651,0.368965315629341,0.857839051492628,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.336393253036082,0,0.22001485746285,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.857867961948885,0,0,0,0.355391948742546,0.791951872933429,1.20575750823834,3.48613383440118,3.499054691372,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0.431255149719035,0.128343036279748,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,2.07970861530807,4.10386674233472,1.26161932027148,0.937131319941706,0,0,0,1.32845119707087,0,0.347534457872331,0.391602314925481,0,0.206768026122887,0.215714200818617,0,0,0,0.604780586659361,2.23297027036899,0.306923946576125,0.841980283299221,3.07533958213682,4.09365799253363,3.69964018630297,0,0.616838775210622,0.177561725313127,0.246381468041427,0.519254429183621,0.464841513839837,0.362578348774867,0.601519410909855,0.0920809889358963,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29227 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULI3 | |||
|association_with_transcript=89bp_to_BC067235_5end | |||
|coexpression_cluster_id=C769 | |||
|description=CAGE_peak_11_at_HEG1_5end | |||
|id=chr3:124732278..124732290,- | |||
|ontology_enrichment_celltype=CL:0000077!1.15e-09!19;CL:0000057!2.12e-09!75;CL:0000055!1.98e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.35e-14;19!CL:1000306;5.98e-11;4!CL:0002547;5.98e-11;4!CL:0002579;1.87e-09;3!CL:0002615;2.85e-08;3!CL:0000632;2.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.85e-15,19;CL:1000306,5.64e-11,4;CL:0002547,5.64e-11,4;CL:0002579,1.98e-09,3;CL:0002615,2.42e-08,3;CL:0000632,2.96e-08,3;CL:0000222,5.66e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.33e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.02e-18;9!UBERON:0000042;3.02e-18;9!UBERON:0003688;5.22e-16;6!UBERON:0002358;5.22e-16;6!UBERON:0003684;5.22e-16;6!UBERON:0001178;5.22e-16;6!UBERON:0004797;5.98e-11;4!UBERON:0000415;5.98e-11;4!UBERON:0007240;5.98e-11;4!UBERON:0005742;5.98e-11;4!UBERON:0005734;5.98e-11;4!UBERON:0004664;5.98e-11;4!UBERON:0004663;5.98e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.65e-16,6;UBERON:0002358,4.65e-16,6;UBERON:0003684,4.65e-16,6;UBERON:0001178,4.65e-16,6;UBERON:0004457,2.76e-13,12;UBERON:0000042,2.76e-13,12;UBERON:0000415,5.64e-11,4;UBERON:0007240,5.64e-11,4;UBERON:0005742,5.64e-11,4;UBERON:0005734,5.64e-11,4;UBERON:0004664,5.64e-11,4;UBERON:0004663,5.64e-11,4;UBERON:0004923,2.72e-07,66 | |||
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| |||
|short_description=p11@HEG1 | |||
}} |
Revision as of 21:16, 12 September 2013
Short description: | p11@HEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_HEG1_5end |
Coexpression cluster: | C769_Fibroblast_Sertoli_Smooth_Mesothelial_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | 89bp_to_BC067235_5end |
EntrezGene: | HEG1 |
HGNC: | 29227 |
UniProt: | Q9ULI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.85e-15 | 19 |
fibroblast of tunica adventitia of artery | 5.64e-11 | 4 |
fibroblast of the aortic adventitia | 5.64e-11 | 4 |
omentum preadipocyte | 1.98e-09 | 3 |
adipocyte of omentum tissue | 2.42e-08 | 3 |
hepatic stellate cell | 2.96e-08 | 3 |
mesodermal cell | 5.66e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.65e-16 | 6 |
peritoneum | 4.65e-16 | 6 |
abdominal cavity | 4.65e-16 | 6 |
visceral peritoneum | 4.65e-16 | 6 |
cavity lining | 2.76e-13 | 12 |
serous membrane | 2.76e-13 | 12 |
artery wall | 5.64e-11 | 4 |
tunica adventitia of artery | 5.64e-11 | 4 |
adventitia | 5.64e-11 | 4 |
tunica adventitia of blood vessel | 5.64e-11 | 4 |
aorta tunica adventitia | 5.64e-11 | 4 |
aorta wall | 5.64e-11 | 4 |
organ component layer | 2.72e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.