FFCP PHASE1:Mm9::chr11:70324339..70324351,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=916|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70324339..70324351,+|id=chr11:70324339..70324351,+|ontology_enrichment_celltype=CL:0002563!1.51e-13!9;CL:0002251!1.51e-13!9;CL:0000239!1.24e-12!6;CL:0000677!1.24e-12!6;CL:0000212!1.24e-12!6;CL:0000584!1.24e-12!6;CL:0000075!1.04e-10!7;CL:0002076!1.54e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,3.17e-13,6;CL:0000677,3.17e-13,6;CL:0000584,3.17e-13,6;CL:0000075,2.29e-11,7;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.76e-27!43;UBERON:0005409!5.67e-27!59;UBERON:0000344!7.68e-22!15;UBERON:0001242!1.12e-17!13;UBERON:0000060!1.12e-17!13;UBERON:0001262!1.12e-17!13;UBERON:0004786!1.12e-17!13;UBERON:0003350!1.51e-13!9;UBERON:0004808!1.51e-13!9;UBERON:0001277!1.51e-13!9;UBERON:0004923!2.01e-12!24;UBERON:0001007!6.02e-12!128;UBERON:0001555!6.02e-12!128;UBERON:0007026!6.02e-12!128;UBERON:0004119!1.24e-11!130;UBERON:0000925!1.24e-11!130;UBERON:0006595!1.24e-11!130;UBERON:0000485!8.23e-11!11;UBERON:0004921!4.07e-10!126;UBERON:0004185!4.07e-10!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.22e-29,31;UBERON:0000344,1.01e-20,15;UBERON:0005409,1.33e-18,47;UBERON:0001242,2.01e-13,13;UBERON:0001262,2.01e-13,13;UBERON:0004786,2.01e-13,13;UBERON:0004923,1.33e-12,24;UBERON:0001962,1.08e-11,2;UBERON:0001961,1.08e-11,2;UBERON:0001744,1.08e-11,2;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001007,8.94e-09,116;UBERON:0001555,8.94e-09,116;UBERON:0007026,8.94e-09,116;UBERON:0004119,1.38e-08,118;UBERON:0000925,1.38e-08,118;UBERON:0006595,1.38e-08,118;UBERON:0002465,4.50e-08,3;UBERON:0000485,2.71e-07,11|phase1_expression=0,0.348975407639361,1.81999695755814,1.20985684522732,1.50268718983904,0.839396359559449,1.86890112476421,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,10.0795226359846,11.0116454912242,0.57423196411502,0,1.29282739611533,6.08074942260396,0.756090389279792,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.43785736662608,0,0,0.515469845288373,1.00841762311671,0.22237804384487,1.14135375667535,0.949058123089023,1.31759163779209,0.502670417600539,0.397912944082302,0.38992817423824,2.69645822596266,1.72910439899755,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr11:70324339..70324351,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=916 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:70324339..70324351,+ | |||
|id=chr11:70324339..70324351,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.51e-13!9;CL:0002251!1.51e-13!9;CL:0000239!1.24e-12!6;CL:0000677!1.24e-12!6;CL:0000212!1.24e-12!6;CL:0000584!1.24e-12!6;CL:0000075!1.04e-10!7;CL:0002076!1.54e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.17e-13,6;CL:0000677,3.17e-13,6;CL:0000584,3.17e-13,6;CL:0000075,2.29e-11,7;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.76e-27!43;UBERON:0005409!5.67e-27!59;UBERON:0000344!7.68e-22!15;UBERON:0001242!1.12e-17!13;UBERON:0000060!1.12e-17!13;UBERON:0001262!1.12e-17!13;UBERON:0004786!1.12e-17!13;UBERON:0003350!1.51e-13!9;UBERON:0004808!1.51e-13!9;UBERON:0001277!1.51e-13!9;UBERON:0004923!2.01e-12!24;UBERON:0001007!6.02e-12!128;UBERON:0001555!6.02e-12!128;UBERON:0007026!6.02e-12!128;UBERON:0004119!1.24e-11!130;UBERON:0000925!1.24e-11!130;UBERON:0006595!1.24e-11!130;UBERON:0000485!8.23e-11!11;UBERON:0004921!4.07e-10!126;UBERON:0004185!4.07e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.22e-29,31;UBERON:0000344,1.01e-20,15;UBERON:0005409,1.33e-18,47;UBERON:0001242,2.01e-13,13;UBERON:0001262,2.01e-13,13;UBERON:0004786,2.01e-13,13;UBERON:0004923,1.33e-12,24;UBERON:0001962,1.08e-11,2;UBERON:0001961,1.08e-11,2;UBERON:0001744,1.08e-11,2;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001007,8.94e-09,116;UBERON:0001555,8.94e-09,116;UBERON:0007026,8.94e-09,116;UBERON:0004119,1.38e-08,118;UBERON:0000925,1.38e-08,118;UBERON:0006595,1.38e-08,118;UBERON:0002465,4.50e-08,3;UBERON:0000485,2.71e-07,11 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,1.20985684522732,1.50268718983904,0.839396359559449,1.86890112476421,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,10.0795226359846,11.0116454912242,0.57423196411502,0,1.29282739611533,6.08074942260396,0.756090389279792,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.43785736662608,0,0,0.515469845288373,1.00841762311671,0.22237804384487,1.14135375667535,0.949058123089023,1.31759163779209,0.502670417600539,0.397912944082302,0.38992817423824,2.69645822596266,1.72910439899755,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:70324339..70324351,+ | |||
}} |
Revision as of 20:44, 12 September 2013
Short description: | p@chr11:70324339..70324351, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70324339..70324351, + |
Coexpression cluster: | MCL_coexpression_mm9:916 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.17e-13 | 6 |
gut absorptive cell | 3.17e-13 | 6 |
enterocyte | 3.17e-13 | 6 |
columnar/cuboidal epithelial cell | 2.29e-11 | 7 |
intestinal epithelial cell | 7.00e-09 | 9 |
epithelial cell of alimentary canal | 7.00e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.22e-29 | 31 |
mucosa | 1.01e-20 | 15 |
gastrointestinal system | 1.33e-18 | 47 |
intestinal mucosa | 2.01e-13 | 13 |
wall of intestine | 2.01e-13 | 13 |
gastrointestinal system mucosa | 2.01e-13 | 13 |
organ component layer | 1.33e-12 | 24 |
gut-associated lymphoid tissue | 1.08e-11 | 2 |
mucosa-associated lymphoid tissue | 1.08e-11 | 2 |
lymphoid tissue | 1.08e-11 | 2 |
epithelium of mucosa | 7.00e-09 | 9 |
gastrointestinal system epithelium | 7.00e-09 | 9 |
intestinal epithelium | 7.00e-09 | 9 |
digestive system | 8.94e-09 | 116 |
digestive tract | 8.94e-09 | 116 |
primitive gut | 8.94e-09 | 116 |
endoderm-derived structure | 1.38e-08 | 118 |
endoderm | 1.38e-08 | 118 |
presumptive endoderm | 1.38e-08 | 118 |
lymphoid system | 4.50e-08 | 3 |
simple columnar epithelium | 2.71e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.