FFCP PHASE1:Hg19::chr2:74729768..74729780,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=151534|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=24bp_to_NR_024606,uc002slx.2_5end|coexpression_cluster_id=C55|description=CAGE_peak_7_at_LOC151534_5end|id=chr2:74729768..74729780,+|ontology_enrichment_celltype=CL:0000181!7.21e-08!12;CL:0000417!7.21e-08!12;CL:0000668!7.21e-08!12;CL:0000414!7.21e-08!12;CL:0000412!7.21e-08!12;CL:0000182!7.21e-08!12|ontology_enrichment_celltype_v019=CL:0000182;5.13e-62;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.99e-62,12;CL:0000223,1.24e-20,58|ontology_enrichment_development_v019=UBERON:0004161;3.92e-35;11!UBERON:0009497;9.23e-30;13!CL:0000223;9.85e-14;58!UBERON:0001041;5.91e-13;30!UBERON:0003104;1.63e-12;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4074;6.42e-09;2!DOID:4905;6.42e-09;2!DOID:1909;6.42e-09;2!DOID:3498;6.42e-09;2|ontology_enrichment_disease_v019_2=DOID:1909,5.94e-09,2;DOID:4074,8.09e-09,2;DOID:4905,8.09e-09,2;DOID:3498,8.09e-09,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002107;7.65e-51;19!UBERON:0006925;7.65e-51;19!UBERON:0002423;1.50e-38;25!UBERON:0002365;1.49e-30;31!UBERON:0002330;1.49e-30;31!UBERON:0002368;8.82e-26;33!UBERON:0000949;2.49e-24;43!UBERON:0005172;8.43e-12;52!UBERON:0005173;8.43e-12;52!UBERON:0002417;8.91e-11;58!UBERON:0000916;8.91e-11;58!UBERON:0001007;3.49e-10;81!UBERON:0002530;4.16e-10;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.55e-51,19;UBERON:0006925,4.55e-51,19;UBERON:0008836,4.55e-51,19;UBERON:0008835,4.69e-44,22;UBERON:0003894,4.69e-44,22;UBERON:0009854,4.01e-42,23;UBERON:0007499,1.01e-38,25;UBERON:0009497,1.01e-38,25;UBERON:0000015,1.01e-38,25;UBERON:0002423,1.01e-38,25;UBERON:0006235,1.01e-38,25;UBERON:0004161,1.01e-38,25;UBERON:0009856,3.24e-37,26;UBERON:0002365,3.83e-31,31;UBERON:0002330,3.83e-31,31;UBERON:0002368,1.57e-27,35;UBERON:0000949,7.70e-27,45;UBERON:0003929,2.88e-22,54;UBERON:0005172,1.17e-17,54;UBERON:0005173,1.17e-17,54;UBERON:0002530,4.12e-16,59;UBERON:0002417,7.83e-16,60;UBERON:0000916,7.83e-16,60;UBERON:0005911,2.06e-14,82;UBERON:0004921,5.42e-12,118;UBERON:0005177,1.52e-11,101;UBERON:0001041,1.01e-10,87;UBERON:0001007,1.36e-09,145;UBERON:0001555,1.36e-09,145;UBERON:0007026,1.36e-09,145;UBERON:0004119,1.33e-08,160;UBERON:0000925,1.33e-08,160;UBERON:0006595,1.33e-08,160;UBERON:0009569,3.58e-08,112;UBERON:0003914,8.61e-08,117;UBERON:0000490,1.32e-07,148;UBERON:0005256,1.92e-07,122|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0.253991577168676,0.381988425558278,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0.210998064528027,0,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0.144090417154106,0.458146384663663,0.686379991447858,0,0.49701014226173,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,4.96334048535509,5.68669422830049,4.4486338943762,0.590564889088493,0.338693328263138,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0,1.61207457045891,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.51649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0.111855431797792,0.785201868921944,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.617393264863557,1.31135736302374,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,0.332660356546013,0.162806537221949,0.213454691755431,0,0.628776414746108,0,0,0,0,0,0|short_description=p7@LOC151534}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=151534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=24bp_to_NR_024606,uc002slx.2_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_7_at_LOC151534_5end | |||
|id=chr2:74729768..74729780,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.21e-08!12;CL:0000417!7.21e-08!12;CL:0000668!7.21e-08!12;CL:0000414!7.21e-08!12;CL:0000412!7.21e-08!12;CL:0000182!7.21e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.13e-62;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.99e-62,12;CL:0000223,1.24e-20,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.92e-35;11!UBERON:0009497;9.23e-30;13!CL:0000223;9.85e-14;58!UBERON:0001041;5.91e-13;30!UBERON:0003104;1.63e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;6.42e-09;2!DOID:4905;6.42e-09;2!DOID:1909;6.42e-09;2!DOID:3498;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.94e-09,2;DOID:4074,8.09e-09,2;DOID:4905,8.09e-09,2;DOID:3498,8.09e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.65e-51;19!UBERON:0006925;7.65e-51;19!UBERON:0002423;1.50e-38;25!UBERON:0002365;1.49e-30;31!UBERON:0002330;1.49e-30;31!UBERON:0002368;8.82e-26;33!UBERON:0000949;2.49e-24;43!UBERON:0005172;8.43e-12;52!UBERON:0005173;8.43e-12;52!UBERON:0002417;8.91e-11;58!UBERON:0000916;8.91e-11;58!UBERON:0001007;3.49e-10;81!UBERON:0002530;4.16e-10;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.55e-51,19;UBERON:0006925,4.55e-51,19;UBERON:0008836,4.55e-51,19;UBERON:0008835,4.69e-44,22;UBERON:0003894,4.69e-44,22;UBERON:0009854,4.01e-42,23;UBERON:0007499,1.01e-38,25;UBERON:0009497,1.01e-38,25;UBERON:0000015,1.01e-38,25;UBERON:0002423,1.01e-38,25;UBERON:0006235,1.01e-38,25;UBERON:0004161,1.01e-38,25;UBERON:0009856,3.24e-37,26;UBERON:0002365,3.83e-31,31;UBERON:0002330,3.83e-31,31;UBERON:0002368,1.57e-27,35;UBERON:0000949,7.70e-27,45;UBERON:0003929,2.88e-22,54;UBERON:0005172,1.17e-17,54;UBERON:0005173,1.17e-17,54;UBERON:0002530,4.12e-16,59;UBERON:0002417,7.83e-16,60;UBERON:0000916,7.83e-16,60;UBERON:0005911,2.06e-14,82;UBERON:0004921,5.42e-12,118;UBERON:0005177,1.52e-11,101;UBERON:0001041,1.01e-10,87;UBERON:0001007,1.36e-09,145;UBERON:0001555,1.36e-09,145;UBERON:0007026,1.36e-09,145;UBERON:0004119,1.33e-08,160;UBERON:0000925,1.33e-08,160;UBERON:0006595,1.33e-08,160;UBERON:0009569,3.58e-08,112;UBERON:0003914,8.61e-08,117;UBERON:0000490,1.32e-07,148;UBERON:0005256,1.92e-07,122 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0.253991577168676,0.381988425558278,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0.210998064528027,0,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0.144090417154106,0.458146384663663,0.686379991447858,0,0.49701014226173,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,4.96334048535509,5.68669422830049,4.4486338943762,0.590564889088493,0.338693328263138,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0,1.61207457045891,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,1.51649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0.111855431797792,0.785201868921944,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.617393264863557,1.31135736302374,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,0.332660356546013,0.162806537221949,0.213454691755431,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p7@LOC151534 | |||
}} |
Revision as of 19:48, 12 September 2013
Short description: | p7@LOC151534 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LOC151534_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 24bp_to_NR_024606, uc002slx.2_5end |
EntrezGene: | LOC151534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.99e-62 | 12 |
endodermal cell | 1.24e-20 | 58 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.94e-09 | 2 |
pancreas adenocarcinoma | 8.09e-09 | 2 |
pancreatic carcinoma | 8.09e-09 | 2 |
pancreatic ductal adenocarcinoma | 8.09e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.