FFCP PHASE1:Mm9::chr11:116704833..116704883,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74319|HGNC=|MCL_coexpression_id=1553|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128784_5end|description=CAGE_peak_1_at_1110005A03Rik_5end|id=chr11:116704833..116704883,+|ontology_enrichment_celltype=CL:0000791!6.21e-07!9;CL:0000789!6.21e-07!9;CL:0002420!6.21e-07!9;CL:0002419!6.21e-07!9;CL:0000790!6.21e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,5.77e-07,9;CL:0000789,5.77e-07,9;CL:0002420,5.77e-07,9;CL:0002419,5.77e-07,9;CL:0000790,5.77e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.76e-11!94;UBERON:0004177!8.09e-10!29;UBERON:0006562!1.49e-09!24;UBERON:0001557!1.49e-09!24;UBERON:0001042!1.49e-09!24;UBERON:0008814!1.49e-09!24;UBERON:0009145!1.49e-09!24;UBERON:0002370!2.30e-09!23;UBERON:0000974!2.30e-09!23;UBERON:0004807!2.30e-09!23;UBERON:0005058!2.30e-09!23;UBERON:0003351!2.30e-09!23;UBERON:0009113!2.30e-09!23;UBERON:0003295!2.30e-09!23;UBERON:0009722!2.30e-09!23;UBERON:0005562!2.30e-09!23;UBERON:0007690!2.30e-09!23;UBERON:0007811!4.15e-09!86;UBERON:0003408!5.78e-09!24;UBERON:0000072!4.65e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.79e-11,43;UBERON:0004177,4.04e-10,29;UBERON:0005057,4.04e-10,29;UBERON:0006562,7.14e-10,24;UBERON:0001557,7.14e-10,24;UBERON:0001042,7.14e-10,24;UBERON:0008814,7.14e-10,24;UBERON:0009145,7.14e-10,24;UBERON:0002370,1.10e-09,23;UBERON:0000974,1.10e-09,23;UBERON:0004807,1.10e-09,23;UBERON:0005058,1.10e-09,23;UBERON:0003351,1.10e-09,23;UBERON:0009113,1.10e-09,23;UBERON:0003295,1.10e-09,23;UBERON:0009722,1.10e-09,23;UBERON:0005562,1.10e-09,23;UBERON:0007690,1.10e-09,23;UBERON:0003408,2.86e-09,24;UBERON:0007811,7.77e-09,36;UBERON:0000072,2.49e-08,27;UBERON:0000077,7.94e-07,35|phase1_expression=2.24208385946712,0.697950815278722,0.909998478779072,0.60492842261366,0,0.503637815735669,1.63528848416868,29.8274877150041,11.5446752164367,8.42632294759177,26.3675671067278,18.1082800919414,40.0609708039021,30.2474592369731,4.66353666541928,6.2767332890846,8.39474253753776,24.4483178152634,21.3898516424952,22.4926515452956,3.48677489619386,2.38298282882125,2.87319768052829,0.95995453676044,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,0.760093677825496,3.02436155711917,2.21730510655305,1.27006134691926,4.92051830067656,15.8481681015439,8.95440021228951,10.9714865936605,8.37094360675713,2.92972141515835,3.906676722619,2.61761871986899,1.17646297606203,2.04913645487534,3.39857247121808,0.755380907853464,0.506884656097573,0.183546752161682,3.12956537739216,1.74420125104357,1.31811709640683,0.58328969722285,0.699932108126813,2.87505128729943,18.456086666351,22.4862264023517,16.8046899571232,0,0.286533439938757,0,6.87875966922632,5.28990979272033,6.33831403506179,1.35537812827653,1.77858959222228,0,0,0.7104801149461,1.49800055259202,3.07374644257244,14.5165457231869,12.0155285115205,11.9885227970288,3.71346279724945,3.3130281142742,12.2490799214954,10.6388472830242,22.9804696652505,0,0.638436690425939,0.614426133024974,7.64940468835124,5.12330804173494,3.64639359389732,0.837548997004143,0.56276261003168,1.37518422999129,3.24091444021034,2.27794689278565,6.15118171223492,0.984440513331393,0.831287161174641,0.579728977403356,1.72084775396277,2.719885334831,0,0,0.448026887097336,2.38755514223978,0.170430322578058,0.779358013808606,0.35333957451034,3.52108549441701,1.28326477414318,0,0,1.94841936910093,2.53359865475099,1.51657333504435,1.1418387971906,16.572024553419,1.03909497345377,3.64319186208885,0.608930956624282,1.61430848079241,2.56228488939458,1.41106448562846,1.0053327306374,0.494389935468748,0.578397427679647,3.5384422077995,2.42650274921114,3.3126227769059,1.93950101254089,0,2.63502717310392,1.25668024088073,1.78819938646014,5.15205035375457,5.39912457894067,3.43089613097275,1.3481157546434,5.49000723382352,16.5863744788981,6.25767552692195,4.85859368927628,1.87009240103604,4.05603157669394,3.36069900706044,3.73220911830279,0.252722758433675,1.68353484709179,3.25301107406759,6.20735681970377,3.78130472591233,3.31550599238573,5.23881043465224,3.84341160854549,5.15359485078509,1.81092359517311,3.44908788692548,6.42960672570586,7.38994721488585,7.23345917010997,5.83899223373756,5.57203466435466,5.14455341019859,4.97585667046233,2.1066395619397,1.54408744268829,0,2.07125772535502,1.64168241986767,2.52086886045421,2.60419209143731,2.95146347621106,1.3884040159864,1.16266972375204,2.68273401399619,3.15266424391358,1.15191894939436,3.11918181750281,1.94565142910054,3.80119967305864,2.63460138349261,1.8788898626452,7.14985825118033,9.98174740079059,0.660837565967596,0.264450566663544,3.19932375802851,3.94802342162745,3.8660238396628,1.81515172161008,1.55664630691409,1.90225626112559,2.84717436926707,1.4822905925161,1.00534083520108,0.994782360205754,2.14460495831032,0,2.80979464837102,2.58883655230677,3.41402221715547,1.5994791765362,2.25415471346161,1.4255592949172,1.35766741017338,1.33258057791605,1.96033265085198,0.885660887877613,0.31399745568275,0.246794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| ||
|EntrezGene=74319 | |||
|HGNC= | |||
|MCL_coexpression_id=1553 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128784_5end | |||
|description=CAGE_peak_1_at_1110005A03Rik_5end | |||
|id=chr11:116704833..116704883,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.21e-07!9;CL:0000789!6.21e-07!9;CL:0002420!6.21e-07!9;CL:0002419!6.21e-07!9;CL:0000790!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.77e-07,9;CL:0000789,5.77e-07,9;CL:0002420,5.77e-07,9;CL:0002419,5.77e-07,9;CL:0000790,5.77e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.76e-11!94;UBERON:0004177!8.09e-10!29;UBERON:0006562!1.49e-09!24;UBERON:0001557!1.49e-09!24;UBERON:0001042!1.49e-09!24;UBERON:0008814!1.49e-09!24;UBERON:0009145!1.49e-09!24;UBERON:0002370!2.30e-09!23;UBERON:0000974!2.30e-09!23;UBERON:0004807!2.30e-09!23;UBERON:0005058!2.30e-09!23;UBERON:0003351!2.30e-09!23;UBERON:0009113!2.30e-09!23;UBERON:0003295!2.30e-09!23;UBERON:0009722!2.30e-09!23;UBERON:0005562!2.30e-09!23;UBERON:0007690!2.30e-09!23;UBERON:0007811!4.15e-09!86;UBERON:0003408!5.78e-09!24;UBERON:0000072!4.65e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.79e-11,43;UBERON:0004177,4.04e-10,29;UBERON:0005057,4.04e-10,29;UBERON:0006562,7.14e-10,24;UBERON:0001557,7.14e-10,24;UBERON:0001042,7.14e-10,24;UBERON:0008814,7.14e-10,24;UBERON:0009145,7.14e-10,24;UBERON:0002370,1.10e-09,23;UBERON:0000974,1.10e-09,23;UBERON:0004807,1.10e-09,23;UBERON:0005058,1.10e-09,23;UBERON:0003351,1.10e-09,23;UBERON:0009113,1.10e-09,23;UBERON:0003295,1.10e-09,23;UBERON:0009722,1.10e-09,23;UBERON:0005562,1.10e-09,23;UBERON:0007690,1.10e-09,23;UBERON:0003408,2.86e-09,24;UBERON:0007811,7.77e-09,36;UBERON:0000072,2.49e-08,27;UBERON:0000077,7.94e-07,35 | |||
|phase1_expression=2.24208385946712,0.697950815278722,0.909998478779072,0.60492842261366,0,0.503637815735669,1.63528848416868,29.8274877150041,11.5446752164367,8.42632294759177,26.3675671067278,18.1082800919414,40.0609708039021,30.2474592369731,4.66353666541928,6.2767332890846,8.39474253753776,24.4483178152634,21.3898516424952,22.4926515452956,3.48677489619386,2.38298282882125,2.87319768052829,0.95995453676044,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,0.760093677825496,3.02436155711917,2.21730510655305,1.27006134691926,4.92051830067656,15.8481681015439,8.95440021228951,10.9714865936605,8.37094360675713,2.92972141515835,3.906676722619,2.61761871986899,1.17646297606203,2.04913645487534,3.39857247121808,0.755380907853464,0.506884656097573,0.183546752161682,3.12956537739216,1.74420125104357,1.31811709640683,0.58328969722285,0.699932108126813,2.87505128729943,18.456086666351,22.4862264023517,16.8046899571232,0,0.286533439938757,0,6.87875966922632,5.28990979272033,6.33831403506179,1.35537812827653,1.77858959222228,0,0,0.7104801149461,1.49800055259202,3.07374644257244,14.5165457231869,12.0155285115205,11.9885227970288,3.71346279724945,3.3130281142742,12.2490799214954,10.6388472830242,22.9804696652505,0,0.638436690425939,0.614426133024974,7.64940468835124,5.12330804173494,3.64639359389732,0.837548997004143,0.56276261003168,1.37518422999129,3.24091444021034,2.27794689278565,6.15118171223492,0.984440513331393,0.831287161174641,0.579728977403356,1.72084775396277,2.719885334831,0,0,0.448026887097336,2.38755514223978,0.170430322578058,0.779358013808606,0.35333957451034,3.52108549441701,1.28326477414318,0,0,1.94841936910093,2.53359865475099,1.51657333504435,1.1418387971906,16.572024553419,1.03909497345377,3.64319186208885,0.608930956624282,1.61430848079241,2.56228488939458,1.41106448562846,1.0053327306374,0.494389935468748,0.578397427679647,3.5384422077995,2.42650274921114,3.3126227769059,1.93950101254089,0,2.63502717310392,1.25668024088073,1.78819938646014,5.15205035375457,5.39912457894067,3.43089613097275,1.3481157546434,5.49000723382352,16.5863744788981,6.25767552692195,4.85859368927628,1.87009240103604,4.05603157669394,3.36069900706044,3.73220911830279,0.252722758433675,1.68353484709179,3.25301107406759,6.20735681970377,3.78130472591233,3.31550599238573,5.23881043465224,3.84341160854549,5.15359485078509,1.81092359517311,3.44908788692548,6.42960672570586,7.38994721488585,7.23345917010997,5.83899223373756,5.57203466435466,5.14455341019859,4.97585667046233,2.1066395619397,1.54408744268829,0,2.07125772535502,1.64168241986767,2.52086886045421,2.60419209143731,2.95146347621106,1.3884040159864,1.16266972375204,2.68273401399619,3.15266424391358,1.15191894939436,3.11918181750281,1.94565142910054,3.80119967305864,2.63460138349261,1.8788898626452,7.14985825118033,9.98174740079059,0.660837565967596,0.264450566663544,3.19932375802851,3.94802342162745,3.8660238396628,1.81515172161008,1.55664630691409,1.90225626112559,2.84717436926707,1.4822905925161,1.00534083520108,0.994782360205754,2.14460495831032,0,2.80979464837102,2.58883655230677,3.41402221715547,1.5994791765362,2.25415471346161,1.4255592949172,1.35766741017338,1.33258057791605,1.96033265085198,0.885660887877613,0.31399745568275,0.246794327843601,0.592905254174298,5.6727335943472,4.71741588271687,6.52100125916076,4.46292267054706,4.58236603529592,3.05551022137704,4.31544206176216,1.45921704097532,1.92192989231657,1.43768206527355,0.372140947668503,2.49630138491648,1.01031551178845,0.896987067609561,0,4.24932337383191,6.06372517665551,2.28150967018836,2.54617628662782,2.34690248288502,4.52266895092903,1.90434912708811,0.975668239288994,1.89162172927429,0.8858587585951,2.23236676120482,0.983179888294428,2.93564469172023,2.02508682014116,0,0,0.491764273019036,1.37968373152366,0.80275294993896,1.05490517932983,0.983609672260053,2.52470927204373,2.52406575533005,1.95219372148319,1.07711698866399,2.15071918157297,1.78238939265915,0.849229592366497,1.61924280669958,0.584511715822624,0.790575555893047,7.71171159412337,1.98716119291576,4.80777129901589,2.76907830901079,2.14461159864296,0,3.64170954232472,4.53485335447127,2.26326095707078,1.77181135728464,3.07435147943927,1.80899805217755,2.54473610634254,3.56497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,4.14140516272013,7.37344497561701,5.14408884075822,4.96552654198366,3.74574516964348,2.46823530903181,3.95804433848979,1.40803024838226,2.1183207086382,0.661585194164886,6.5954501176592,7.58882805470756,6.45348296731268,6.92359595218192,3.28281799490123,2.91480836629851,2.96680483216816,7.86006051670122,1.857481811669,2.03713980106683,5.27431679613135,7.24479406921433,8.46479240864134,6.96911562974807,6.71766971153558,4.56059913554598,2.86401185404534,4.11236791655476,5.69294507955176,3.34816556547584,1.88179466413022,1.09181281873089,4.18079473792944,2.89287095038676,2.6175594198403,0.90730481304255,2.4853572523477,6.76431526421028,3.28936401296753,3.47462829959905,3.694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| |||
|short_description=p1@1110005A03Rik | |||
}} |
Revision as of 18:53, 12 September 2013
Short description: | p1@1110005A03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1110005A03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1553 |
Association with transcript: | 0bp_to_ENSMUST00000128784_5end |
EntrezGene: | 1110005A03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.77e-07 | 9 |
alpha-beta T cell | 5.77e-07 | 9 |
immature T cell | 5.77e-07 | 9 |
mature T cell | 5.77e-07 | 9 |
immature alpha-beta T cell | 5.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 7.79e-11 | 43 |
hemopoietic organ | 4.04e-10 | 29 |
immune organ | 4.04e-10 | 29 |
pharynx | 7.14e-10 | 24 |
upper respiratory tract | 7.14e-10 | 24 |
chordate pharynx | 7.14e-10 | 24 |
pharyngeal arch system | 7.14e-10 | 24 |
pharyngeal region of foregut | 7.14e-10 | 24 |
thymus | 1.10e-09 | 23 |
neck | 1.10e-09 | 23 |
respiratory system epithelium | 1.10e-09 | 23 |
hemolymphoid system gland | 1.10e-09 | 23 |
pharyngeal epithelium | 1.10e-09 | 23 |
thymic region | 1.10e-09 | 23 |
pharyngeal gland | 1.10e-09 | 23 |
entire pharyngeal arch endoderm | 1.10e-09 | 23 |
thymus primordium | 1.10e-09 | 23 |
early pharyngeal endoderm | 1.10e-09 | 23 |
gland of gut | 2.86e-09 | 24 |
craniocervical region | 7.77e-09 | 36 |
segment of respiratory tract | 2.49e-08 | 27 |
mixed endoderm/mesoderm-derived structure | 7.94e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.