FFCP PHASE1:Mm9::chr11:109333894..109333905,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104681|HGNC=|MCL_coexpression_id=74|UniProt=E9Q5J8|association_with_transcript=96bp_to_ENSMUST00000168740_5end|description=CAGE_peak_14_at_Slc16a6_5end|id=chr11:109333894..109333905,-|ontology_enrichment_celltype=CL:0000239!3.60e-07!6;CL:0000677!3.60e-07!6;CL:0000212!3.60e-07!6;CL:0000584!3.60e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,3.17e-13,6;CL:0000677,3.17e-13,6;CL:0000584,3.17e-13,6;CL:0000075,2.29e-11,7;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9;CL:0000682,7.17e-08,3;CL:0000066,9.38e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.85e-14!43;UBERON:0005409!4.96e-11!59;UBERON:0000344!9.47e-09!15;UBERON:0001242!3.62e-07!13;UBERON:0000060!3.62e-07!13;UBERON:0001262!3.62e-07!13;UBERON:0004786!3.62e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.54e-34,31;UBERON:0005409,1.45e-21,47;UBERON:0000344,2.08e-11,15;UBERON:0001242,1.85e-09,13;UBERON:0001262,1.85e-09,13;UBERON:0004786,1.85e-09,13;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001007,1.26e-08,116;UBERON:0001555,1.26e-08,116;UBERON:0007026,1.26e-08,116;UBERON:0004119,1.94e-08,118;UBERON:0000925,1.94e-08,118;UBERON:0006595,1.94e-08,118;UBERON:0004921,1.39e-07,114;UBERON:0000485,2.71e-07,11;UBERON:0004923,5.78e-07,24|phase1_expression=0,2.09385244583617,1.81999695755814,1.51232105653415,1.50268718983904,0.16787927191189,0.233612640595526,0,0.140788722151667,0.936258105287974,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0,0.595745707205312,0,1.43993180514066,0.22940928106717,4.01962374880514,2.15380998079537,0.861884930743556,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,10.2429822724977,2.3800550999719,0,0,0.128867461322093,0.403367049246685,0.667134131534611,1.33157938278791,1.89811624617805,1.4822905925161,0.502670417600539,1.1937388322469,1.55971269695296,0.898819408654221,3.02593269824572,3.58454291857861,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477489376012546,0.164140899745061,3.20628920292836,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p14@Slc16a6}} | ||
|EntrezGene=104681 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=E9Q5J8 | |||
|association_with_transcript=96bp_to_ENSMUST00000168740_5end | |||
|description=CAGE_peak_14_at_Slc16a6_5end | |||
|id=chr11:109333894..109333905,- | |||
|ontology_enrichment_celltype=CL:0000239!3.60e-07!6;CL:0000677!3.60e-07!6;CL:0000212!3.60e-07!6;CL:0000584!3.60e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.17e-13,6;CL:0000677,3.17e-13,6;CL:0000584,3.17e-13,6;CL:0000075,2.29e-11,7;CL:0002563,7.00e-09,9;CL:0002251,7.00e-09,9;CL:0000682,7.17e-08,3;CL:0000066,9.38e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.85e-14!43;UBERON:0005409!4.96e-11!59;UBERON:0000344!9.47e-09!15;UBERON:0001242!3.62e-07!13;UBERON:0000060!3.62e-07!13;UBERON:0001262!3.62e-07!13;UBERON:0004786!3.62e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.54e-34,31;UBERON:0005409,1.45e-21,47;UBERON:0000344,2.08e-11,15;UBERON:0001242,1.85e-09,13;UBERON:0001262,1.85e-09,13;UBERON:0004786,1.85e-09,13;UBERON:0003350,7.00e-09,9;UBERON:0004808,7.00e-09,9;UBERON:0001277,7.00e-09,9;UBERON:0001007,1.26e-08,116;UBERON:0001555,1.26e-08,116;UBERON:0007026,1.26e-08,116;UBERON:0004119,1.94e-08,118;UBERON:0000925,1.94e-08,118;UBERON:0006595,1.94e-08,118;UBERON:0004921,1.39e-07,114;UBERON:0000485,2.71e-07,11;UBERON:0004923,5.78e-07,24 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,1.51232105653415,1.50268718983904,0.16787927191189,0.233612640595526,0,0.140788722151667,0.936258105287974,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0,0.595745707205312,0,1.43993180514066,0.22940928106717,4.01962374880514,2.15380998079537,0.861884930743556,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,10.2429822724977,2.3800550999719,0,0,0.128867461322093,0.403367049246685,0.667134131534611,1.33157938278791,1.89811624617805,1.4822905925161,0.502670417600539,1.1937388322469,1.55971269695296,0.898819408654221,3.02593269824572,3.58454291857861,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477489376012546,0.164140899745061,3.20628920292836,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p14@Slc16a6 | |||
}} |
Revision as of 18:38, 12 September 2013
Short description: | p14@Slc16a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Slc16a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 96bp_to_ENSMUST00000168740_5end |
EntrezGene: | Slc16a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.17e-13 | 6 |
gut absorptive cell | 3.17e-13 | 6 |
enterocyte | 3.17e-13 | 6 |
columnar/cuboidal epithelial cell | 2.29e-11 | 7 |
intestinal epithelial cell | 7.00e-09 | 9 |
epithelial cell of alimentary canal | 7.00e-09 | 9 |
M cell of gut | 7.17e-08 | 3 |
epithelial cell | 9.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.54e-34 | 31 |
gastrointestinal system | 1.45e-21 | 47 |
mucosa | 2.08e-11 | 15 |
intestinal mucosa | 1.85e-09 | 13 |
wall of intestine | 1.85e-09 | 13 |
gastrointestinal system mucosa | 1.85e-09 | 13 |
epithelium of mucosa | 7.00e-09 | 9 |
gastrointestinal system epithelium | 7.00e-09 | 9 |
intestinal epithelium | 7.00e-09 | 9 |
digestive system | 1.26e-08 | 116 |
digestive tract | 1.26e-08 | 116 |
primitive gut | 1.26e-08 | 116 |
endoderm-derived structure | 1.94e-08 | 118 |
endoderm | 1.94e-08 | 118 |
presumptive endoderm | 1.94e-08 | 118 |
subdivision of digestive tract | 1.39e-07 | 114 |
simple columnar epithelium | 2.71e-07 | 11 |
organ component layer | 5.78e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.