FFCP PHASE1:Mm9::chr11:100621309..100621325,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=380728|HGNC=|MCL_coexpression_id=22|UniProt=A2A5F7|association_with_transcript=-53bp_to_ENSMUST00000107363_5end|description=CAGE_peak_2_at_Kcnh4_5end|id=chr11:100621309..100621325,-|ontology_enrichment_celltype=CL:0000117!6.50e-11!23;CL:0000337!6.50e-11!23;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.00e-20,23;CL:0000337,5.00e-20,23;CL:0000540,4.05e-13,33;CL:0000047,4.05e-13,33;CL:0000031,4.05e-13,33;CL:0000404,4.05e-13,33;CL:0000393,1.11e-10,39;CL:0000211,1.11e-10,39;CL:0002613,1.33e-10,3;CL:0000120,4.09e-10,3;CL:0002612,7.58e-10,3;CL:0002319,1.96e-09,43;CL:0002608,2.37e-09,3;CL:0000221,3.70e-09,44;CL:0000133,3.70e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.05e-19!34;UBERON:0001049!5.98e-18!52;UBERON:0005068!5.98e-18!52;UBERON:0006241!5.98e-18!52;UBERON:0007135!5.98e-18!52;UBERON:0002346!4.07e-17!71;UBERON:0003075!4.07e-17!71;UBERON:0007284!4.07e-17!71;UBERON:0001017!3.85e-16!73;UBERON:0005743!3.85e-16!73;UBERON:0003056!1.33e-15!49;UBERON:0002791!2.66e-15!29;UBERON:0003528!2.66e-15!29;UBERON:0001893!2.66e-15!29;UBERON:0000073!3.10e-15!75;UBERON:0001016!3.10e-15!75;UBERON:0003080!7.73e-15!40;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0000955!3.21e-14!50;UBERON:0006238!3.21e-14!50;UBERON:0000033!5.58e-14!63;UBERON:0004121!6.19e-14!102;UBERON:0000924!6.19e-14!102;UBERON:0006601!6.19e-14!102;UBERON:0002616!8.36e-14!49;UBERON:0000956!1.56e-12!21;UBERON:0001869!1.56e-12!21;UBERON:0000203!1.56e-12!21;UBERON:0002619!2.84e-12!17;UBERON:0007811!5.28e-12!86;UBERON:0000153!3.67e-10!94;UBERON:0002021!2.17e-09!10;UBERON:0000411!2.17e-09!10;UBERON:0001950!2.17e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-34,34;UBERON:0003528,2.48e-26,29;UBERON:0002791,2.48e-26,29;UBERON:0001893,2.48e-26,29;UBERON:0002619,1.91e-22,17;UBERON:0001049,4.83e-21,52;UBERON:0005068,4.83e-21,52;UBERON:0006241,4.83e-21,52;UBERON:0007135,4.83e-21,52;UBERON:0000956,1.06e-20,21;UBERON:0001869,1.06e-20,21;UBERON:0000203,1.06e-20,21;UBERON:0000073,4.26e-20,54;UBERON:0001017,5.16e-19,73;UBERON:0002780,1.24e-18,39;UBERON:0001890,1.24e-18,39;UBERON:0006240,1.24e-18,39;UBERON:0001016,2.25e-18,75;UBERON:0003080,4.49e-18,40;UBERON:0002021,1.08e-17,10;UBERON:0000411,1.08e-17,10;UBERON:0001950,1.08e-17,10;UBERON:0002346,2.96e-16,64;UBERON:0003075,2.96e-16,64;UBERON:0007284,2.96e-16,64;UBERON:0002616,3.09e-15,46;UBERON:0000955,7.82e-15,47;UBERON:0006238,7.82e-15,47;UBERON:0003056,4.45e-14,49;UBERON:0010371,1.07e-13,73;UBERON:0004121,1.88e-13,95;UBERON:0000924,1.88e-13,95;UBERON:0006601,1.88e-13,95;UBERON:0000369,6.48e-11,5;UBERON:0002435,6.48e-11,5;UBERON:0000204,6.48e-11,5;UBERON:0010082,6.48e-11,5;UBERON:0010314,6.06e-10,92;UBERON:0002257,7.58e-10,3;UBERON:0001948,1.09e-09,5;UBERON:0002315,1.09e-09,5;UBERON:0002240,4.42e-08,6;UBERON:0005174,4.42e-08,6;UBERON:0001137,4.42e-08,6;UBERON:0000025,3.61e-07,114;UBERON:0002420,8.47e-07,8;UBERON:0007245,8.47e-07,8;UBERON:0010009,8.47e-07,8;UBERON:0010011,8.47e-07,8;UBERON:0000454,8.47e-07,8;UBERON:0001954,9.00e-07,7;UBERON:0003022,9.00e-07,7;UBERON:0002421,9.00e-07,7;UBERON:0000349,9.00e-07,7;UBERON:0002600,9.00e-07,7|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0.68487187290202,0.478632953972018,0,0.174840804837995,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.503347818173209,2.17608642603403,0,0,0,0,4.24864567805155,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.14260393761521,0.662605622854841,1.46988959057945,1.82106394934649,1.83843757322004,0,0.127687338085188,0,4.87979264601717,4.94033275453012,4.68822033501084,0.279182999001381,0,0.45839474333043,2.35702868378934,1.56608848879013,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,1.19980546198682,0,0.149790639404823,0,5.6544458450789,1.04294592115366,0.767146371990992,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.452114453507145,0.748401490664606,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.54356918568927,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0.207574695168353,1.59609949360412,1.02440163452481,0.729320151204882,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,1.2673964994512,0.943131706930381,0.655490552289177,0.384150914429216,0.631790158511746,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.658765662907314,0.169229215783353,0.73171189149109,0.526139422875686,0.543216455383447,1.12228454331548,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,1.24905288968973,0,0.644613162144895,0.191288332068843,0,0|short_description=p2@Kcnh4}} | ||
|EntrezGene=380728 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=A2A5F7 | |||
|association_with_transcript=-53bp_to_ENSMUST00000107363_5end | |||
|description=CAGE_peak_2_at_Kcnh4_5end | |||
|id=chr11:100621309..100621325,- | |||
|ontology_enrichment_celltype=CL:0000117!6.50e-11!23;CL:0000337!6.50e-11!23;CL:0000540!1.19e-08!33;CL:0000047!1.19e-08!33;CL:0000031!1.19e-08!33;CL:0000404!1.19e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.00e-20,23;CL:0000337,5.00e-20,23;CL:0000540,4.05e-13,33;CL:0000047,4.05e-13,33;CL:0000031,4.05e-13,33;CL:0000404,4.05e-13,33;CL:0000393,1.11e-10,39;CL:0000211,1.11e-10,39;CL:0002613,1.33e-10,3;CL:0000120,4.09e-10,3;CL:0002612,7.58e-10,3;CL:0002319,1.96e-09,43;CL:0002608,2.37e-09,3;CL:0000221,3.70e-09,44;CL:0000133,3.70e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.05e-19!34;UBERON:0001049!5.98e-18!52;UBERON:0005068!5.98e-18!52;UBERON:0006241!5.98e-18!52;UBERON:0007135!5.98e-18!52;UBERON:0002346!4.07e-17!71;UBERON:0003075!4.07e-17!71;UBERON:0007284!4.07e-17!71;UBERON:0001017!3.85e-16!73;UBERON:0005743!3.85e-16!73;UBERON:0003056!1.33e-15!49;UBERON:0002791!2.66e-15!29;UBERON:0003528!2.66e-15!29;UBERON:0001893!2.66e-15!29;UBERON:0000073!3.10e-15!75;UBERON:0001016!3.10e-15!75;UBERON:0003080!7.73e-15!40;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0000955!3.21e-14!50;UBERON:0006238!3.21e-14!50;UBERON:0000033!5.58e-14!63;UBERON:0004121!6.19e-14!102;UBERON:0000924!6.19e-14!102;UBERON:0006601!6.19e-14!102;UBERON:0002616!8.36e-14!49;UBERON:0000956!1.56e-12!21;UBERON:0001869!1.56e-12!21;UBERON:0000203!1.56e-12!21;UBERON:0002619!2.84e-12!17;UBERON:0007811!5.28e-12!86;UBERON:0000153!3.67e-10!94;UBERON:0002021!2.17e-09!10;UBERON:0000411!2.17e-09!10;UBERON:0001950!2.17e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-34,34;UBERON:0003528,2.48e-26,29;UBERON:0002791,2.48e-26,29;UBERON:0001893,2.48e-26,29;UBERON:0002619,1.91e-22,17;UBERON:0001049,4.83e-21,52;UBERON:0005068,4.83e-21,52;UBERON:0006241,4.83e-21,52;UBERON:0007135,4.83e-21,52;UBERON:0000956,1.06e-20,21;UBERON:0001869,1.06e-20,21;UBERON:0000203,1.06e-20,21;UBERON:0000073,4.26e-20,54;UBERON:0001017,5.16e-19,73;UBERON:0002780,1.24e-18,39;UBERON:0001890,1.24e-18,39;UBERON:0006240,1.24e-18,39;UBERON:0001016,2.25e-18,75;UBERON:0003080,4.49e-18,40;UBERON:0002021,1.08e-17,10;UBERON:0000411,1.08e-17,10;UBERON:0001950,1.08e-17,10;UBERON:0002346,2.96e-16,64;UBERON:0003075,2.96e-16,64;UBERON:0007284,2.96e-16,64;UBERON:0002616,3.09e-15,46;UBERON:0000955,7.82e-15,47;UBERON:0006238,7.82e-15,47;UBERON:0003056,4.45e-14,49;UBERON:0010371,1.07e-13,73;UBERON:0004121,1.88e-13,95;UBERON:0000924,1.88e-13,95;UBERON:0006601,1.88e-13,95;UBERON:0000369,6.48e-11,5;UBERON:0002435,6.48e-11,5;UBERON:0000204,6.48e-11,5;UBERON:0010082,6.48e-11,5;UBERON:0010314,6.06e-10,92;UBERON:0002257,7.58e-10,3;UBERON:0001948,1.09e-09,5;UBERON:0002315,1.09e-09,5;UBERON:0002240,4.42e-08,6;UBERON:0005174,4.42e-08,6;UBERON:0001137,4.42e-08,6;UBERON:0000025,3.61e-07,114;UBERON:0002420,8.47e-07,8;UBERON:0007245,8.47e-07,8;UBERON:0010009,8.47e-07,8;UBERON:0010011,8.47e-07,8;UBERON:0000454,8.47e-07,8;UBERON:0001954,9.00e-07,7;UBERON:0003022,9.00e-07,7;UBERON:0002421,9.00e-07,7;UBERON:0000349,9.00e-07,7;UBERON:0002600,9.00e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0.68487187290202,0.478632953972018,0,0.174840804837995,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.503347818173209,2.17608642603403,0,0,0,0,4.24864567805155,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.14260393761521,0.662605622854841,1.46988959057945,1.82106394934649,1.83843757322004,0,0.127687338085188,0,4.87979264601717,4.94033275453012,4.68822033501084,0.279182999001381,0,0.45839474333043,2.35702868378934,1.56608848879013,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,1.19980546198682,0,0.149790639404823,0,5.6544458450789,1.04294592115366,0.767146371990992,0.41557608911912,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0.452114453507145,0.748401490664606,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.54356918568927,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0.207574695168353,1.59609949360412,1.02440163452481,0.729320151204882,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,1.2673964994512,0.943131706930381,0.655490552289177,0.384150914429216,0.631790158511746,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.658765662907314,0.169229215783353,0.73171189149109,0.526139422875686,0.543216455383447,1.12228454331548,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,1.24905288968973,0,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p2@Kcnh4 | |||
}} |
Revision as of 18:12, 12 September 2013
Short description: | p2@Kcnh4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnh4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -53bp_to_ENSMUST00000107363_5end |
EntrezGene: | Kcnh4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.00e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.00e-20 | 23 |
neuron | 4.05e-13 | 33 |
neuronal stem cell | 4.05e-13 | 33 |
neuroblast | 4.05e-13 | 33 |
electrically signaling cell | 4.05e-13 | 33 |
electrically responsive cell | 1.11e-10 | 39 |
electrically active cell | 1.11e-10 | 39 |
striatum neuron | 1.33e-10 | 3 |
granule cell | 4.09e-10 | 3 |
neuron of the ventral spinal cord | 7.58e-10 | 3 |
neural cell | 1.96e-09 | 43 |
hippocampal neuron | 2.37e-09 | 3 |
ectodermal cell | 3.70e-09 | 44 |
neurectodermal cell | 3.70e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.