FFCP PHASE1:Mm9::chr10:75031375..75031384,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14598|HGNC=|MCL_coexpression_id=23|UniProt=D3YY79|association_with_transcript=0bp_to_ENSMUST00000145928_5end|description=CAGE_peak_7_at_Ggt1_5end|id=chr10:75031375..75031384,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001264!3.33e-12!12;UBERON:0003922!3.33e-12!12;UBERON:0002114!3.33e-12!12;UBERON:0003923!3.33e-12!12;UBERON:0003924!3.33e-12!12;UBERON:0003921!3.33e-12!12;UBERON:0002113!6.64e-12!14;UBERON:0003918!6.64e-12!14;UBERON:0005095!6.64e-12!14;UBERON:0007687!6.64e-12!14;UBERON:0001008!9.34e-12!17;UBERON:0006554!1.34e-11!16;UBERON:0001045!7.38e-11!13;UBERON:0002108!6.96e-08!16;UBERON:0002075!1.51e-07!19;UBERON:0005177!1.99e-07!85;UBERON:0005409!2.53e-07!59;UBERON:0000489!7.64e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.34e-26,12;UBERON:0002113,1.98e-19,14;UBERON:0003918,1.98e-19,14;UBERON:0011143,1.98e-19,14;UBERON:0005095,1.98e-19,14;UBERON:0007687,1.98e-19,14;UBERON:0005177,3.62e-19,79;UBERON:0002100,2.56e-17,90;UBERON:0006554,2.75e-17,18;UBERON:0001008,3.29e-16,19;UBERON:0002075,3.89e-15,19;UBERON:0003886,6.51e-13,38;UBERON:0002553,1.81e-12,39;UBERON:0000489,5.19e-12,21;UBERON:0002323,1.41e-11,37;UBERON:0004458,1.41e-11,37;UBERON:0005172,1.38e-10,49;UBERON:0005173,1.38e-10,49;UBERON:0002417,1.38e-10,49;UBERON:0000916,1.38e-10,49;UBERON:0003104,9.66e-09,61;UBERON:0009142,9.66e-09,61;UBERON:0000080,1.19e-08,4;UBERON:0005904,1.19e-08,4;UBERON:0006947,1.19e-08,4;UBERON:0002120,1.19e-08,4;UBERON:0004054,1.19e-08,4;UBERON:0004875,1.19e-08,4;UBERON:0004876,1.19e-08,4;UBERON:0005721,1.19e-08,4;UBERON:0005754,1.19e-08,4;UBERON:0007297,1.19e-08,4;UBERON:0000058,4.75e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,1.48439043634778,0,0,0.173485326766136,0,0.461230994512117,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,1.12023300235348,2.11491850037158,11.625246887949,0,0.260240885925407,0,0,0.60281927134286,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0.426576501070468,0,0.902072229254653,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0.569003702859245,0.685491075658373,2.25415471346161,2.03651327845314,3.10323979468201,3.29638353484497,4.99568643281633,6.7900668070617,4.70996183524124,6.91024117962083,0,0.166845105716094,0.589676985339609,0.224862112384854,1.21716072833102,1.92941727801933,3.56476192493988,4.89083433666378,2.91843408195064,1.64736847912849,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93411418415229,2.20749397043786,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0.162886959353576,0.164970122972535,26.5490276679926,2.42780636154981,3.93020624054176,9.24164890803901,12.6979813938732,10.7602301780375,3.6179961043551,8.72480950746013,4.9909632973861,12.6414703174326,23.1920938864997,25.7838858120467,0,0,0,0,0,0,0,0,0,0.21183207086382,7.05690873775878,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0.167884616364078,0,1.31377732815827,0.183151624267265,0.214368379079066,9.02829787263654,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.516919220600519,0.952587382566147,0.811190281613988,0,0,0.588795680537589,0,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0,0.118635018124174,0.197008964751127,0.818462086339379,0.619747364743864,0.578719832943424,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p7@Ggt1}} | ||
|EntrezGene=14598 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=D3YY79 | |||
|association_with_transcript=0bp_to_ENSMUST00000145928_5end | |||
|description=CAGE_peak_7_at_Ggt1_5end | |||
|id=chr10:75031375..75031384,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001264!3.33e-12!12;UBERON:0003922!3.33e-12!12;UBERON:0002114!3.33e-12!12;UBERON:0003923!3.33e-12!12;UBERON:0003924!3.33e-12!12;UBERON:0003921!3.33e-12!12;UBERON:0002113!6.64e-12!14;UBERON:0003918!6.64e-12!14;UBERON:0005095!6.64e-12!14;UBERON:0007687!6.64e-12!14;UBERON:0001008!9.34e-12!17;UBERON:0006554!1.34e-11!16;UBERON:0001045!7.38e-11!13;UBERON:0002108!6.96e-08!16;UBERON:0002075!1.51e-07!19;UBERON:0005177!1.99e-07!85;UBERON:0005409!2.53e-07!59;UBERON:0000489!7.64e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.34e-26,12;UBERON:0002113,1.98e-19,14;UBERON:0003918,1.98e-19,14;UBERON:0011143,1.98e-19,14;UBERON:0005095,1.98e-19,14;UBERON:0007687,1.98e-19,14;UBERON:0005177,3.62e-19,79;UBERON:0002100,2.56e-17,90;UBERON:0006554,2.75e-17,18;UBERON:0001008,3.29e-16,19;UBERON:0002075,3.89e-15,19;UBERON:0003886,6.51e-13,38;UBERON:0002553,1.81e-12,39;UBERON:0000489,5.19e-12,21;UBERON:0002323,1.41e-11,37;UBERON:0004458,1.41e-11,37;UBERON:0005172,1.38e-10,49;UBERON:0005173,1.38e-10,49;UBERON:0002417,1.38e-10,49;UBERON:0000916,1.38e-10,49;UBERON:0003104,9.66e-09,61;UBERON:0009142,9.66e-09,61;UBERON:0000080,1.19e-08,4;UBERON:0005904,1.19e-08,4;UBERON:0006947,1.19e-08,4;UBERON:0002120,1.19e-08,4;UBERON:0004054,1.19e-08,4;UBERON:0004875,1.19e-08,4;UBERON:0004876,1.19e-08,4;UBERON:0005721,1.19e-08,4;UBERON:0005754,1.19e-08,4;UBERON:0007297,1.19e-08,4;UBERON:0000058,4.75e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,1.48439043634778,0,0,0.173485326766136,0,0.461230994512117,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,1.12023300235348,2.11491850037158,11.625246887949,0,0.260240885925407,0,0,0.60281927134286,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0.426576501070468,0,0.902072229254653,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0.569003702859245,0.685491075658373,2.25415471346161,2.03651327845314,3.10323979468201,3.29638353484497,4.99568643281633,6.7900668070617,4.70996183524124,6.91024117962083,0,0.166845105716094,0.589676985339609,0.224862112384854,1.21716072833102,1.92941727801933,3.56476192493988,4.89083433666378,2.91843408195064,1.64736847912849,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93411418415229,2.20749397043786,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0.162886959353576,0.164970122972535,26.5490276679926,2.42780636154981,3.93020624054176,9.24164890803901,12.6979813938732,10.7602301780375,3.6179961043551,8.72480950746013,4.9909632973861,12.6414703174326,23.1920938864997,25.7838858120467,0,0,0,0,0,0,0,0,0,0.21183207086382,7.05690873775878,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0.167884616364078,0,1.31377732815827,0.183151624267265,0.214368379079066,9.02829787263654,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.516919220600519,0.952587382566147,0.811190281613988,0,0,0.588795680537589,0,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0,0.118635018124174,0.197008964751127,0.818462086339379,0.619747364743864,0.578719832943424,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p7@Ggt1 | |||
}} |
Revision as of 17:21, 12 September 2013
Short description: | p7@Ggt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ggt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | 0bp_to_ENSMUST00000145928_5end |
EntrezGene: | Ggt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 9.34e-26 | 12 |
kidney | 1.98e-19 | 14 |
kidney mesenchyme | 1.98e-19 | 14 |
upper urinary tract | 1.98e-19 | 14 |
kidney rudiment | 1.98e-19 | 14 |
kidney field | 1.98e-19 | 14 |
trunk region element | 3.62e-19 | 79 |
trunk | 2.56e-17 | 90 |
urinary system structure | 2.75e-17 | 18 |
renal system | 3.29e-16 | 19 |
viscus | 3.89e-15 | 19 |
body cavity precursor | 6.51e-13 | 38 |
anatomical cavity | 1.81e-12 | 39 |
cavitated compound organ | 5.19e-12 | 21 |
body cavity | 1.41e-11 | 37 |
body cavity or lining | 1.41e-11 | 37 |
abdomen element | 1.38e-10 | 49 |
abdominal segment element | 1.38e-10 | 49 |
abdominal segment of trunk | 1.38e-10 | 49 |
abdomen | 1.38e-10 | 49 |
mesenchyme | 9.66e-09 | 61 |
entire embryonic mesenchyme | 9.66e-09 | 61 |
mesonephros | 1.19e-08 | 4 |
duct of male reproductive system | 1.19e-08 | 4 |
male genital duct | 1.19e-08 | 4 |
pronephros | 1.19e-08 | 4 |
internal male genitalia | 1.19e-08 | 4 |
nephrogenic cord | 1.19e-08 | 4 |
urogenital ridge | 1.19e-08 | 4 |
pronephric mesoderm | 1.19e-08 | 4 |
rostral part of nephrogenic cord | 1.19e-08 | 4 |
presumptive pronephric mesoderm | 1.19e-08 | 4 |
duct | 4.75e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.