FFCP PHASE1:Hg19::chr2:220408563..220408576,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24291|TSSclassifier=S|UniProt=Q8IZ52|association_with_transcript=-54bp_to_ENST00000243776_5end|description=CAGE_peak_3_at_CHPF_5end|id=chr2:220408563..220408576,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.69e-10;19!CL:0002586;6.55e-09;3!CL:0000149;9.12e-07;4|ontology_enrichment_celltype_v019_2=CL:0000349,1.53e-10,19;CL:0002586,1.03e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.66e-12!365;UBERON:0000064!3.44e-08!219;UBERON:0000481!6.01e-08!347;UBERON:0003075!1.21e-07!86;UBERON:0007284!1.21e-07!86;UBERON:0000468!2.71e-07!659;UBERON:0000119!2.87e-07!312;UBERON:0004121!3.46e-07!169;UBERON:0000483!4.17e-07!309;UBERON:0002346!6.01e-07!90;UBERON:0000924!9.49e-07!173;UBERON:0006601!9.49e-07!173|ontology_enrichment_uberon_v019=UBERON:0000478;6.45e-10;24!UBERON:0001781;6.55e-09;3!UBERON:0001782;6.55e-09;3!UBERON:0001987;3.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000478,6.07e-10,24;UBERON:0005631,2.95e-09,14;UBERON:0000158,2.95e-09,14;UBERON:0004923,1.01e-08,66;UBERON:0001782,1.03e-08,3;UBERON:0005424,1.03e-08,3;UBERON:0001987,2.68e-07,4;UBERON:0004340,2.68e-07,4;UBERON:0003124,4.98e-07,7|phase1_expression=1.63510541343501,1.07050261945492,0.704772020479856,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.522371256399677,0,1.39560233594486,0.218441372130172,1.31883489114227,0,1.32558950291166,0,0,0.730310090387373,0,1.23121058076788,0.204000691244253,1.56727360739044,1.43117993565528,0.410623275218653,1.12988375635323,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,0,0.434539556882471,0.795285947051099,0.486634870302636,0.567208902984407,0.221729397462564,0.614843499851882,0.654895377488563,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.662045904066094,1.43418310374407,1.06400514659507,0,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0.454072282934794,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,0,0,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.150238058906597,0.226864366320042,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0.292311015483596,0.252433774244115,0,0.323292113637624,0.355009592516614,0.201504196455281,0.339121184620975,0.773043412653187,1.09098448236334,0,0.365921118388786,0.132529768321485,0.116193942869518,0.207322110030741,0,0,1.56449532329816,1.28648187638577,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0.491953754172454,2.05881372358231,0.439001141634502,0,0.502644862058154,0.185176890317059,0.325808305310325,1.03993478527958,0,0.811512834825538,0.821860859650752,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.335964256397719,0.425325291727159,0.447792613514241,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.380987365753014,1.90994212779139,0,0,0.822619941626588,0.300343057843917,0,0.224262168690721,0.43596006883328,0.1466765716419,1.03417372606222,3.57656445851882,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0.532844358032199,0.428933980974443,2.17048642156577,0.823240336780769,0.325736184293735,0.710783897485092,0,1.20575750823834,1.74306691720059,0.599837947092342,0,0,0,0.479249710983165,2.29723871668228,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0,0,0,1.27047312111232,0,1.54657762555539,0.502548796003046,0,0,0,0,0.24538298343828,0,0.542530047399471,0.831883446123229,0.356857977594324,0.473107245101804,0.234282829985426,0.300946099727719,4.5481500811197,0,0,0.553107505625109,0.260650843404249,1.17480694477644,1.02943027143257,0,0,0.106727557803444,1.5156378572313,4.99306318531491,0.907170879989041,1.48864684691266,0.306923946576125,0.841980283299221,0.896974044789907,1.02341449813341,1.60853921143608,0,0.308419387605311,1.24293207719189,0.410635780069046,0.519254429183621,0.464841513839837,0.241718899183244,1.80455823272956,0.736647911487171,0.229628896329213,0.364182336013434,0.393373244878272,0,0,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,1.00337954770971,1.01950509218015,0.831076008928724,0.447749509444357,0,0,1.02580050046556,2.62411716559765,1.30151357865721,0.10304101164772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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24291 | |||
|TSSclassifier=S | |||
|UniProt=Q8IZ52 | |||
|association_with_transcript=-54bp_to_ENST00000243776_5end | |||
|description=CAGE_peak_3_at_CHPF_5end | |||
|id=chr2:220408563..220408576,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.69e-10;19!CL:0002586;6.55e-09;3!CL:0000149;9.12e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.53e-10,19;CL:0002586,1.03e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.66e-12!365;UBERON:0000064!3.44e-08!219;UBERON:0000481!6.01e-08!347;UBERON:0003075!1.21e-07!86;UBERON:0007284!1.21e-07!86;UBERON:0000468!2.71e-07!659;UBERON:0000119!2.87e-07!312;UBERON:0004121!3.46e-07!169;UBERON:0000483!4.17e-07!309;UBERON:0002346!6.01e-07!90;UBERON:0000924!9.49e-07!173;UBERON:0006601!9.49e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.45e-10;24!UBERON:0001781;6.55e-09;3!UBERON:0001782;6.55e-09;3!UBERON:0001987;3.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,6.07e-10,24;UBERON:0005631,2.95e-09,14;UBERON:0000158,2.95e-09,14;UBERON:0004923,1.01e-08,66;UBERON:0001782,1.03e-08,3;UBERON:0005424,1.03e-08,3;UBERON:0001987,2.68e-07,4;UBERON:0004340,2.68e-07,4;UBERON:0003124,4.98e-07,7 | |||
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| |||
|short_description=p3@CHPF | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p3@CHPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CHPF_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000243776_5end |
EntrezGene: | CHPF |
HGNC: | 24291 |
UniProt: | Q8IZ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.53e-10 | 19 |
retinal pigment epithelial cell | 1.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 6.07e-10 | 24 |
extraembryonic membrane | 2.95e-09 | 14 |
membranous layer | 2.95e-09 | 14 |
organ component layer | 1.01e-08 | 66 |
pigmented layer of retina | 1.03e-08 | 3 |
presumptive retinal pigmented epithelium | 1.03e-08 | 3 |
placenta | 2.68e-07 | 4 |
allantois | 2.68e-07 | 4 |
chorion | 4.98e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.