FFCP PHASE1:Hg19::chr22:33454349..33454350,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8224|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11496|TSSclassifier=S|UniProt=O14994|association_with_transcript=7bp_to_ENST00000358763_5end|coexpression_cluster_id=C32|description=CAGE_peak_6_at_SYN3_5end|id=chr22:33454349..33454350,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;7.79e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.85e-65!34;UBERON:0003528!7.85e-65!34;UBERON:0001869!4.90e-64!32;UBERON:0002780!4.48e-62!41;UBERON:0001890!4.48e-62!41;UBERON:0006240!4.48e-62!41;UBERON:0001049!1.60e-60!57;UBERON:0005068!1.60e-60!57;UBERON:0006241!1.60e-60!57;UBERON:0007135!1.60e-60!57;UBERON:0003080!1.87e-60!42;UBERON:0001893!5.48e-60!34;UBERON:0002616!3.23e-58!59;UBERON:0002791!6.99e-57!33;UBERON:0002619!2.77e-54!22;UBERON:0001950!8.51e-54!20;UBERON:0001017!3.60e-53!82;UBERON:0000955!4.04e-51!69;UBERON:0006238!4.04e-51!69;UBERON:0005743!2.55e-50!86;UBERON:0000956!2.00e-47!25;UBERON:0000203!2.00e-47!25;UBERON:0000073!9.11e-45!94;UBERON:0001016!9.11e-45!94;UBERON:0003075!1.55e-42!86;UBERON:0007284!1.55e-42!86;UBERON:0002346!2.84e-40!90;UBERON:0003056!1.27e-39!61;UBERON:0007023!5.65e-30!115;UBERON:0000033!4.10e-27!123;UBERON:0000153!1.82e-25!129;UBERON:0007811!1.82e-25!129;UBERON:0004121!1.48e-22!169;UBERON:0000200!2.83e-22!6;UBERON:0000924!7.96e-22!173;UBERON:0006601!7.96e-22!173;UBERON:0002420!3.71e-19!9;UBERON:0007245!3.71e-19!9;UBERON:0010009!3.71e-19!9;UBERON:0010011!3.71e-19!9;UBERON:0000454!3.71e-19!9;UBERON:0002308!1.94e-18!9;UBERON:0000125!1.94e-18!9;UBERON:0001872!2.27e-18!5;UBERON:0001871!6.51e-17!7;UBERON:0000025!3.99e-15!194;UBERON:0000369!5.57e-15!4;UBERON:0002435!5.57e-15!4;UBERON:0000204!5.57e-15!4;UBERON:0010082!5.57e-15!4;UBERON:0009663!1.22e-12!7;UBERON:0002021!2.97e-12!5;UBERON:0002771!3.00e-12!3;UBERON:0000349!3.23e-12!5;UBERON:0005383!9.66e-12!3;UBERON:0005382!9.66e-12!3;UBERON:0000988!4.00e-11!3;UBERON:0004111!1.61e-10!241;UBERON:0002680!2.49e-09!9;UBERON:0001895!2.49e-09!9;UBERON:0010092!2.49e-09!9;UBERON:0000064!5.65e-09!219;UBERON:0001876!7.38e-09!2;UBERON:0001905!1.24e-08!2;UBERON:0002757!1.24e-08!2;UBERON:0010134!1.24e-08!2;UBERON:0002784!1.24e-08!2;UBERON:0005408!1.24e-08!2;UBERON:0001899!1.24e-08!2;UBERON:0001870!1.67e-08!2;UBERON:0001873!2.16e-08!2;UBERON:0010122!2.16e-08!2;UBERON:0000483!2.67e-08!309;UBERON:0000477!2.78e-08!286;UBERON:0000119!3.90e-08!312;UBERON:0002148!6.77e-08!2;UBERON:0009662!6.77e-08!2;UBERON:0002360!1.45e-07!2;UBERON:0000094!1.45e-07!2;UBERON:0007645!1.45e-07!2;UBERON:0004733!6.40e-07!12;UBERON:0002028!6.40e-07!12;UBERON:0007277!6.40e-07!12|ontology_enrichment_uberon_v019=UBERON:0001950;1.58e-104;20!UBERON:0002619;2.38e-95;22!UBERON:0000956;3.15e-84;25!UBERON:0000203;3.15e-84;25!UBERON:0001869;4.65e-59;32!UBERON:0002791;3.97e-57;32!UBERON:0003528;1.35e-53;34!UBERON:0002020;1.35e-53;34!UBERON:0001893;1.30e-51;34!UBERON:0001871;4.10e-47;6!UBERON:0002780;8.20e-44;41!UBERON:0001890;8.20e-44;41!UBERON:0000200;1.37e-35;6!UBERON:0000073;1.79e-31;53!UBERON:0002616;1.79e-31;53!UBERON:0002771;1.06e-27;2!UBERON:0001876;2.73e-27;2!UBERON:0001905;2.73e-27;2!UBERON:0002702;2.73e-27;2!UBERON:0002757;2.73e-27;2!UBERON:0010134;2.73e-27;2!UBERON:0005408;2.73e-27;2!UBERON:0001899;2.73e-27;2!UBERON:0002021;1.46e-24;5!UBERON:0001870;1.48e-18;3!UBERON:0000955;3.07e-18;68!UBERON:0001017;6.51e-15;75!UBERON:0002022;1.50e-14;1!UBERON:0003296;3.60e-14;4!UBERON:0010133;3.60e-14;4!UBERON:0002784;3.60e-14;4!UBERON:0001872;1.00e-11;5!UBERON:0000349;1.58e-11;5!UBERON:0001016;3.17e-11;83!UBERON:0001894;1.71e-08;7!UBERON:0002420;8.58e-07;9!UBERON:0007245;8.58e-07;9!UBERON:0010009;8.58e-07;9!UBERON:0010011;8.58e-07;9!UBERON:0000454;8.58e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.05e-104,20;UBERON:0002619,1.64e-95,22;UBERON:0000956,2.27e-84,25;UBERON:0000203,2.27e-84,25;UBERON:0002780,4.30e-69,41;UBERON:0001890,4.30e-69,41;UBERON:0003080,4.30e-69,41;UBERON:0006240,4.30e-69,41;UBERON:0002791,3.04e-66,32;UBERON:0001869,3.04e-66,32;UBERON:0003528,2.15e-62,34;UBERON:0002020,2.15e-62,34;UBERON:0001893,2.15e-62,34;UBERON:0000073,1.79e-53,53;UBERON:0002616,1.79e-53,53;UBERON:0001049,1.36e-50,56;UBERON:0005068,1.36e-50,56;UBERON:0006241,1.36e-50,56;UBERON:0007135,1.36e-50,56;UBERON:0001871,3.57e-47,6;UBERON:0003056,2.06e-46,61;UBERON:0000955,5.80e-41,68;UBERON:0006238,5.80e-41,68;UBERON:0000200,1.50e-35,6;UBERON:0001017,2.42e-34,81;UBERON:0003075,2.42e-34,82;UBERON:0007284,2.42e-34,82;UBERON:0002346,1.06e-32,86;UBERON:0001016,7.51e-31,89;UBERON:0001876,8.13e-28,2;UBERON:0002771,1.60e-27,2;UBERON:0002702,2.09e-27,2;UBERON:0001905,5.34e-27,2;UBERON:0002757,5.34e-27,2;UBERON:0010134,5.34e-27,2;UBERON:0005408,5.34e-27,2;UBERON:0001899,5.34e-27,2;UBERON:0010371,7.34e-27,104;UBERON:0002021,1.41e-24,5;UBERON:0010314,6.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11496 | |||
|TSSclassifier=S | |||
|UniProt=O14994 | |||
|association_with_transcript=7bp_to_ENST00000358763_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_6_at_SYN3_5end | |||
|id=chr22:33454349..33454350,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.79e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@SYN3 | |||
}} |
Revision as of 11:38, 12 September 2013
Short description: | p6@SYN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SYN3_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 7bp_to_ENST00000358763_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | O14994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.