FFCP PHASE1:Hg19::chr22:33257682..33257717,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11822|TSSclassifier=S|UniProt=|association_with_transcript=102bp_to_AF035289_5end|coexpression_cluster_id=C50|description=CAGE_peak_12_at_TIMP3_5end|id=chr22:33257682..33257717,+|ontology_enrichment_celltype=CL:0000055!1.90e-11!180;CL:0000057!1.36e-09!75;CL:0002334!1.56e-08!12|ontology_enrichment_celltype_v019=CL:0002334;7.19e-12;12!CL:0000349;1.18e-08;19!CL:0002541;1.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0002334,4.43e-12,12;CL:0000057,2.67e-09,76;CL:0000136,6.48e-09,15;CL:0000349,7.80e-09,19;CL:0002541,1.19e-07,3;CL:0002615,9.84e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.87e-09!365;UBERON:0004923!4.38e-09!57;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0007023!2.21e-07!115;UBERON:0003102!6.73e-07!95;UBERON:0002199!8.02e-07!45;UBERON:0002416!8.02e-07!45|ontology_enrichment_uberon_v019=UBERON:0004457;5.31e-13;9!UBERON:0000042;5.31e-13;9!UBERON:0003688;1.54e-11;6!UBERON:0002358;1.54e-11;6!UBERON:0003684;1.54e-11;6!UBERON:0001178;1.54e-11;6!UBERON:0001013;1.83e-11;14!UBERON:0005631;7.09e-10;10!UBERON:0000158;7.09e-10;10!UBERON:0000478;7.57e-08;24!UBERON:0003124;1.19e-07;3!UBERON:0000920;1.19e-07;3!UBERON:0004923;5.16e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0004923,5.07e-14,66;UBERON:0005631,3.53e-13,14;UBERON:0000158,3.53e-13,14;UBERON:0003688,1.04e-11,6;UBERON:0002358,1.04e-11,6;UBERON:0003684,1.04e-11,6;UBERON:0001178,1.04e-11,6;UBERON:0001013,2.47e-11,14;UBERON:0003124,2.36e-10,7;UBERON:0004457,1.76e-09,12;UBERON:0000042,1.76e-09,12;UBERON:0000478,5.31e-08,24;UBERON:0000920,1.19e-07,3|phase1_expression=0.54503513781167,1.2846031433459,1.55049844505568,12.0087958023756,2.68176656656373,6.97870819280295,2.53299878168311,1.26343974685366,0,0.245733936501509,0.697801167972428,1.74753097704138,0.527533956456907,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,7.29952305453954,0,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,5.96366342034382,1.2663051166458,0.264818361626438,2.29469296599051,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0,0,0.151357427644931,0,1.40592859100278,0.624320153660641,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0.226864366320042,1.61450672119976,0,1.27159140695737,3.60109315301283,0.206105058476878,1.28820270022815,0.930584281657949,2.36286865137773,0.876933046450788,1.51460264546469,0.368199594569197,1.77810662500693,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.464367928031979,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,1.62904152655162,0,0,0,0,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0,0.468008530278475,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0.381988425558278,0,3.4214489204541,1.13110241973656,2.70308752059526,0.285826432630578,0.560655421726804,0,0.7333828582095,1.42198887333556,0,1.690605505112,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.623912584592421,0.892144943985809,0.946214490203608,0.117141414992713,1.80567659836631,0,1.03473071292505,0.664225598535437,1.10621501125022,0.347534457872331,0.587403472388222,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0.496215615637554,1.84154367945675,3.64858122762996,1.53766979106841,3.07024349440022,4.02134802859019,4.45254199334973,3.23840356985577,6.03709866064632,0.0821271560138091,0.519254429183621,1.51073491997947,0.120859449591622,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,1.02580050046556,0.984043937099117,1.95227036798582,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,0.267096106940212,0,0.192190067365106,0,0,2.32422774648643,4.09256050879832,0,0,1.59691809095107,0,0.18532421910392,0,0,0,0.38126038784765,0.767693373934002,2.5676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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=102bp_to_AF035289_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_12_at_TIMP3_5end | |||
|id=chr22:33257682..33257717,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-11!180;CL:0000057!1.36e-09!75;CL:0002334!1.56e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.19e-12;12!CL:0000349;1.18e-08;19!CL:0002541;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.43e-12,12;CL:0000057,2.67e-09,76;CL:0000136,6.48e-09,15;CL:0000349,7.80e-09,19;CL:0002541,1.19e-07,3;CL:0002615,9.84e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.87e-09!365;UBERON:0004923!4.38e-09!57;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0007023!2.21e-07!115;UBERON:0003102!6.73e-07!95;UBERON:0002199!8.02e-07!45;UBERON:0002416!8.02e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.31e-13;9!UBERON:0000042;5.31e-13;9!UBERON:0003688;1.54e-11;6!UBERON:0002358;1.54e-11;6!UBERON:0003684;1.54e-11;6!UBERON:0001178;1.54e-11;6!UBERON:0001013;1.83e-11;14!UBERON:0005631;7.09e-10;10!UBERON:0000158;7.09e-10;10!UBERON:0000478;7.57e-08;24!UBERON:0003124;1.19e-07;3!UBERON:0000920;1.19e-07;3!UBERON:0004923;5.16e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,5.07e-14,66;UBERON:0005631,3.53e-13,14;UBERON:0000158,3.53e-13,14;UBERON:0003688,1.04e-11,6;UBERON:0002358,1.04e-11,6;UBERON:0003684,1.04e-11,6;UBERON:0001178,1.04e-11,6;UBERON:0001013,2.47e-11,14;UBERON:0003124,2.36e-10,7;UBERON:0004457,1.76e-09,12;UBERON:0000042,1.76e-09,12;UBERON:0000478,5.31e-08,24;UBERON:0000920,1.19e-07,3 | |||
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| |||
|short_description=p12@TIMP3 | |||
}} |
Revision as of 11:38, 12 September 2013
Short description: | p12@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 102bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.43e-12 | 12 |
fibroblast | 2.67e-09 | 76 |
fat cell | 6.48e-09 | 15 |
extraembryonic cell | 7.80e-09 | 19 |
chorionic membrane mesenchymal stem cell | 1.19e-07 | 3 |
adipocyte of omentum tissue | 9.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 5.07e-14 | 66 |
extraembryonic membrane | 3.53e-13 | 14 |
membranous layer | 3.53e-13 | 14 |
omentum | 1.04e-11 | 6 |
peritoneum | 1.04e-11 | 6 |
abdominal cavity | 1.04e-11 | 6 |
visceral peritoneum | 1.04e-11 | 6 |
adipose tissue | 2.47e-11 | 14 |
chorion | 2.36e-10 | 7 |
cavity lining | 1.76e-09 | 12 |
serous membrane | 1.76e-09 | 12 |
extraembryonic structure | 5.31e-08 | 24 |
egg chorion | 1.19e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.