FFCP PHASE1:Hg19::chr22:31489256..31489265,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6525|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11126|TSSclassifier=S|UniProt=B5MCI0|association_with_transcript=-78bp_to_ENST00000404574,uc003ajo.1_5end|coexpression_cluster_id=C305|description=CAGE_peak_16_at_SMTN_5end|id=chr22:31489256..31489265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006603;1.43e-15;65!UBERON:0010227;5.93e-12;1!UBERON:0010226;5.93e-12;1!UBERON:0004140;5.93e-12;1!UBERON:0005062;1.10e-11;4!UBERON:0007284;1.10e-11;4!UBERON:0006242;1.32e-11;1!UBERON:0004874;1.32e-11;1!UBERON:0003104;2.81e-11;31|ontology_enrichment_disease=DOID:114!4.22e-07!2|ontology_enrichment_disease_v019=DOID:114;3.92e-22;2!DOID:178;1.32e-11;1!DOID:326;1.32e-11;1!DOID:3978;1.32e-11;1!DOID:3394;1.32e-11;1!DOID:5844;1.32e-11;1!DOID:1287;1.47e-11;4|ontology_enrichment_disease_v019_2=DOID:114,4.37e-22,2;DOID:178,1.47e-11,1;DOID:326,1.47e-11,1;DOID:3978,1.47e-11,1;DOID:3394,1.47e-11,1;DOID:5844,1.47e-11,1;DOID:1287,1.55e-11,4|ontology_enrichment_uberon=UBERON:0007023!6.98e-85!115;UBERON:0001049!9.16e-25!57;UBERON:0005068!9.16e-25!57;UBERON:0006241!9.16e-25!57;UBERON:0007135!9.16e-25!57;UBERON:0001893!3.37e-24!34;UBERON:0002616!1.07e-23!59;UBERON:0001869!2.14e-23!32;UBERON:0002791!1.49e-22!33;UBERON:0000955!2.01e-22!69;UBERON:0006238!2.01e-22!69;UBERON:0003075!6.90e-22!86;UBERON:0007284!6.90e-22!86;UBERON:0002020!7.72e-22!34;UBERON:0003528!7.72e-22!34;UBERON:0002780!1.74e-21!41;UBERON:0001890!1.74e-21!41;UBERON:0006240!1.74e-21!41;UBERON:0003080!7.42e-21!42;UBERON:0002346!1.50e-20!90;UBERON:0005743!1.35e-19!86;UBERON:0001017!2.72e-19!82;UBERON:0002420!1.68e-17!9;UBERON:0007245!1.68e-17!9;UBERON:0010009!1.68e-17!9;UBERON:0010011!1.68e-17!9;UBERON:0000454!1.68e-17!9;UBERON:0000073!5.01e-17!94;UBERON:0001016!5.01e-17!94;UBERON:0003056!2.60e-14!61;UBERON:0000153!8.53e-14!129;UBERON:0007811!8.53e-14!129;UBERON:0000033!1.03e-13!123;UBERON:0002619!1.08e-13!22;UBERON:0002308!3.29e-13!9;UBERON:0000125!3.29e-13!9;UBERON:0009663!6.63e-13!7;UBERON:0001950!1.10e-12!20;UBERON:0000956!8.47e-12!25;UBERON:0000203!8.47e-12!25;UBERON:0001871!1.81e-11!7;UBERON:0000369!1.32e-10!4;UBERON:0002435!1.32e-10!4;UBERON:0000204!1.32e-10!4;UBERON:0010082!1.32e-10!4;UBERON:0000481!1.39e-10!347;UBERON:0004121!3.02e-10!169;UBERON:0000924!8.09e-10!173;UBERON:0006601!8.09e-10!173;UBERON:0003978!1.08e-09!3;UBERON:0009751!1.08e-09!3;UBERON:0000946!1.08e-09!3;UBERON:0002523!1.08e-09!3;UBERON:0005983!1.08e-09!3;UBERON:0002165!1.08e-09!3;UBERON:0002062!1.08e-09!3;UBERON:0007280!1.08e-09!3;UBERON:0004151!1.24e-09!3;UBERON:0000025!1.29e-09!194;UBERON:0004111!2.43e-09!241;UBERON:0000064!5.40e-09!219;UBERON:0003103!1.10e-08!69;UBERON:0005383!1.21e-08!3;UBERON:0005382!1.21e-08!3;UBERON:0000349!1.40e-08!5;UBERON:0002771!1.61e-08!3;UBERON:0000062!3.95e-08!511;UBERON:0001896!4.21e-08!3;UBERON:0005290!4.21e-08!3;UBERON:0010096!4.21e-08!3;UBERON:0002298!1.29e-07!8;UBERON:0000467!1.59e-07!625;UBERON:0000480!1.74e-07!626;UBERON:0000477!2.03e-07!286;UBERON:0007100!2.44e-07!27;UBERON:0000483!3.10e-07!309;UBERON:0000119!4.57e-07!312;UBERON:0000200!5.20e-07!6;UBERON:0001630!6.12e-07!2;UBERON:0005090!6.12e-07!2;UBERON:0002133!6.12e-07!2;UBERON:0004733!6.76e-07!12;UBERON:0002028!6.76e-07!12;UBERON:0007277!6.76e-07!12;UBERON:0002081!6.86e-07!2;UBERON:0000468!7.34e-07!659|ontology_enrichment_uberon_v019=UBERON:0007100;3.50e-26;25!UBERON:0003978;2.90e-15;3!UBERON:0000946;2.90e-15;3!UBERON:0004151;4.28e-15;3!UBERON:0001723;1.23e-14;3!UBERON:0001033;1.23e-14;3!UBERON:0002135;3.27e-12;1!UBERON:0001389;3.27e-12;1!UBERON:0000026;3.27e-12;1!UBERON:0008784;3.27e-12;1!UBERON:0006058;3.27e-12;1!UBERON:0003663;3.27e-12;1!UBERON:0004256;3.27e-12;1!UBERON:0004708;3.27e-12;1!UBERON:0002101;3.27e-12;1!UBERON:0004709;3.27e-12;1!UBERON:0002529;3.27e-12;1!UBERON:0010538;3.27e-12;1!UBERON:0003661;3.27e-12;1!UBERON:0010890;3.27e-12;1!UBERON:0002471;3.27e-12;1!UBERON:0001383;3.27e-12;1!UBERON:0010758;3.27e-12;1!UBERON:0010707;3.27e-12;1!UBERON:0000978;3.27e-12;1!UBERON:0002103;3.27e-12;1!UBERON:0001665;3.27e-12;1!UBERON:0003823;3.27e-12;1!UBERON:0000154;3.27e-12;1!UBERON:0010709;3.27e-12;1!UBERON:0000948;5.24e-12;22!UBERON:0002084;5.93e-12;1!UBERON:0002079;5.93e-12;1!UBERON:0002146;5.93e-12;1!UBERON:0002082;5.93e-12;1!UBERON:0005623;5.93e-12;1!UBERON:0000989;1.32e-11;1!UBERON:0008811;1.32e-11;1!UBERON:0001255;9.96e-07;2!UBERON:0005090;9.96e-07;2!UBERON:0001630;9.96e-07;2!UBERON:0002133;9.96e-07;2!UBERON:0001556;9.96e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.05e-24,27;UBERON:0007023,2.55e-21,114;UBERON:0003103,3.16e-17,68;UBERON:0003978,2.42e-15,3;UBERON:0009751,2.42e-15,3;UBERON:0000946,2.42e-15,3;UBERON:0002523,2.42e-15,3;UBERON:0005983,2.42e-15,3;UBERON:0002165,2.42e-15,3;UBERON:0002062,2.42e-15,3;UBERON:0007280,2.42e-15,3;UBERON:0004151,3.46e-15,3;UBERON:0001723,1.15e-14,3;UBERON:0001033,1.15e-14,3;UBERON:00100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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11126 | |||
|TSSclassifier=S | |||
|UniProt=B5MCI0 | |||
|association_with_transcript=-78bp_to_ENST00000404574,uc003ajo.1_5end | |||
|coexpression_cluster_id=C305 | |||
|description=CAGE_peak_16_at_SMTN_5end | |||
|id=chr22:31489256..31489265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.43e-15;65!UBERON:0010227;5.93e-12;1!UBERON:0010226;5.93e-12;1!UBERON:0004140;5.93e-12;1!UBERON:0005062;1.10e-11;4!UBERON:0007284;1.10e-11;4!UBERON:0006242;1.32e-11;1!UBERON:0004874;1.32e-11;1!UBERON:0003104;2.81e-11;31 | |||
|ontology_enrichment_disease=DOID:114!4.22e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.92e-22;2!DOID:178;1.32e-11;1!DOID:326;1.32e-11;1!DOID:3978;1.32e-11;1!DOID:3394;1.32e-11;1!DOID:5844;1.32e-11;1!DOID:1287;1.47e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.37e-22,2;DOID:178,1.47e-11,1;DOID:326,1.47e-11,1;DOID:3978,1.47e-11,1;DOID:3394,1.47e-11,1;DOID:5844,1.47e-11,1;DOID:1287,1.55e-11,4 | |||
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|short_description=p16@SMTN | |||
}} |
Revision as of 11:31, 12 September 2013
Short description: | p16@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_SMTN_5end |
Coexpression cluster: | C305_heart_skeletal_smooth_left_bladder_penis_esophagus |
Association with transcript: | -78bp_to_ENST00000404574, uc003ajo.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | B5MCI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.37e-22 | 2 |
vascular disease | 1.47e-11 | 1 |
ischemia | 1.47e-11 | 1 |
extrinsic cardiomyopathy | 1.47e-11 | 1 |
myocardial ischemia | 1.47e-11 | 1 |
myocardial infarction | 1.47e-11 | 1 |
cardiovascular system disease | 1.55e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.