FFCP PHASE1:Hg19::chr21:47418307..47418324,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C198|description=CAGE_peak_at_chr21:47418307..47418324,+|id=chr21:47418307..47418324,+|ontology_enrichment_celltype=CL:0000055!1.03e-38!180;CL:0000057!2.68e-27!75;CL:0000048!6.12e-17!430;CL:0000723!2.48e-16!436;CL:0000034!2.66e-16!444;CL:0002371!9.96e-12!591;CL:0000680!1.24e-11!57;CL:0000056!1.24e-11!57;CL:0000355!1.24e-11!57;CL:0002620!7.82e-11!23;CL:0000393!1.33e-10!60;CL:0000211!1.33e-10!60;CL:0000187!2.86e-10!54;CL:0000183!3.03e-10!59;CL:0000499!8.23e-10!27;CL:0002320!9.92e-10!365;CL:0000144!1.91e-09!625;CL:0000219!4.62e-08!390;CL:0000134!5.93e-08!358;CL:0000327!5.97e-08!14;CL:0002570!1.22e-07!8;CL:0000192!3.60e-07!42;CL:0000514!3.60e-07!42;CL:0002334!4.89e-07!12|ontology_enrichment_celltype_v019=CL:0000499;1.63e-11;28!CL:0002559;5.06e-11;5!CL:0002552;1.53e-09;5!CL:0002570;1.97e-09;8!CL:0000134;1.20e-08;55!CL:0000057;2.41e-08;73!CL:0000135;4.21e-08;3!CL:0000388;4.21e-08;3!CL:0000723;7.37e-08;61!CL:0000048;8.98e-08;58!CL:0002320;2.22e-07;188!CL:0000346;2.30e-07;3!CL:1000428;2.30e-07;3!CL:0000327;2.68e-07;15!CL:0002521;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,3.58e-19,76;CL:0000048,4.36e-18,427;CL:0000723,1.56e-17,433;CL:0000034,8.13e-17,441;CL:0002320,2.31e-15,361;CL:0000134,7.68e-12,354;CL:0000499,1.90e-11,28;CL:0002559,3.18e-11,5;CL:0000219,2.23e-10,386;CL:0002570,2.46e-09,8;CL:0002552,3.20e-09,5;CL:0000135,4.20e-08,3;CL:0000388,4.20e-08,3;CL:0002521,1.33e-07,3;CL:0000346,1.51e-07,3;CL:1000428,1.51e-07,3;CL:0000327,3.12e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.15e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:17,9.78e-07,5;DOID:450,9.78e-07,5;DOID:66,9.78e-07,5;DOID:423,9.78e-07,5;DOID:0080000,9.78e-07,5;DOID:11722,9.78e-07,5|ontology_enrichment_uberon=UBERON:0000914!3.08e-16!83;UBERON:0002329!3.08e-16!83;UBERON:0003077!3.08e-16!83;UBERON:0003059!3.08e-16!83;UBERON:0007282!3.08e-16!83;UBERON:0009618!3.08e-16!83;UBERON:0007285!3.08e-16!83;UBERON:0004290!8.69e-15!70;UBERON:0002199!3.88e-14!45;UBERON:0002416!3.88e-14!45;UBERON:0000486!1.16e-13!82;UBERON:0003102!2.70e-12!95;UBERON:0001134!7.35e-11!61;UBERON:0002036!7.35e-11!61;UBERON:0003082!7.35e-11!61;UBERON:0002385!9.75e-11!63;UBERON:0001015!9.75e-11!63;UBERON:0000383!9.75e-11!63;UBERON:0002097!1.61e-10!40;UBERON:0001013!2.51e-10!14;UBERON:0005256!7.56e-10!143;UBERON:0002384!4.26e-09!375|ontology_enrichment_uberon_v019=UBERON:0001013;5.23e-14;14!UBERON:0002072;3.43e-11;5!UBERON:0002073;5.06e-11;5!UBERON:0004905;8.87e-09;8!UBERON:0000982;8.87e-09;8!UBERON:0004770;8.87e-09;8!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0007846;4.21e-08;3!UBERON:0000043;4.21e-08;3!UBERON:0007845;4.21e-08;3!UBERON:0003102;1.80e-07;50!UBERON:0000412;2.30e-07;3!UBERON:0001992;2.30e-07;3!UBERON:0002190;2.88e-07;3!UBERON:0002384;3.57e-07;198!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002204;7.98e-07;70|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-14,371;UBERON:0001013,3.82e-14,14;UBERON:0002199,2.07e-13,46;UBERON:0002416,2.07e-13,46;UBERON:0002072,1.36e-11,5;UBERON:0002073,3.18e-11,5;UBERON:0005086,3.18e-11,5;UBERON:0003102,1.24e-10,99;UBERON:0002329,4.38e-09,71;UBERON:0003059,4.38e-09,71;UBERON:0007282,4.38e-09,71;UBERON:0004290,4.38e-09,71;UBERON:0009618,4.38e-09,71;UBERON:0003077,7.04e-09,72;UBERON:0007285,7.04e-09,72;UBERON:0007524,1.12e-08,73;UBERON:0000486,1.43e-08,83;UBERON:0004905,1.58e-08,8;UBERON:0000982,1.58e-08,8;UBERON:0004770,1.58e-08,8;UBERON:0007846,4.20e-08,3;UBERON:0000043,4.20e-08,3;UBERON:0007845,4.20e-08,3;UBERON:0002097,6.40e-08,41;UBERON:0007503,9.20e-08,78;UBERON:0002190,1.33e-07,3;UBERON:0000412,1.51e-07,3;UBERON:0001992,1.51e-07,3;UBERON:0003104,7.48e-07,160;UBERON:0009142,7.48e-07,160;UBERON:0011135,7.97e-07,5;UBERON:0002216,7.97e-07,5;UBERON:0011134,7.97e-07,5;UBERON:0002209,7.97e-07,5;UBERON:0002213,7.97e-07,5;UBERON:0005856,7.97e-07,5;UBERON:0005866,7.97e-07,5;UBERON:0005863,7.97e-07,5;UBERON:0007844,7.97e-07,5;UBERON:0011138,7.97e-07,5;UBERON:0001130,7.97e-07,5;UBERON:0001066,7.97e-07,5;UBERON:0001468,7.97e-07,5|phase1_expression=0,1.07050261945492,0.422863212287913,3.00219895059391,1.34088328328186,0,2.53299878168311,1.89515962028049,3.65659879479774,0,0,0,0,1.23766352960047,3.31397375727916,1.34465029290355,1.80808358407193,2.19093027116212,1.46379839637152,0.123121058076788,1.02000345622126,0.626909442956176,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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0,0,0.078493092850514,0,0,0.913158720509496,0,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,11.1598505450025,4.62175628631418,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.488965776731466,0.813792356631477,0,0.603821380773079,0|short_description=p@chr21:47418307..47418324,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47418307..47418324,+ | |||
|id=chr21:47418307..47418324,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-38!180;CL:0000057!2.68e-27!75;CL:0000048!6.12e-17!430;CL:0000723!2.48e-16!436;CL:0000034!2.66e-16!444;CL:0002371!9.96e-12!591;CL:0000680!1.24e-11!57;CL:0000056!1.24e-11!57;CL:0000355!1.24e-11!57;CL:0002620!7.82e-11!23;CL:0000393!1.33e-10!60;CL:0000211!1.33e-10!60;CL:0000187!2.86e-10!54;CL:0000183!3.03e-10!59;CL:0000499!8.23e-10!27;CL:0002320!9.92e-10!365;CL:0000144!1.91e-09!625;CL:0000219!4.62e-08!390;CL:0000134!5.93e-08!358;CL:0000327!5.97e-08!14;CL:0002570!1.22e-07!8;CL:0000192!3.60e-07!42;CL:0000514!3.60e-07!42;CL:0002334!4.89e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.63e-11;28!CL:0002559;5.06e-11;5!CL:0002552;1.53e-09;5!CL:0002570;1.97e-09;8!CL:0000134;1.20e-08;55!CL:0000057;2.41e-08;73!CL:0000135;4.21e-08;3!CL:0000388;4.21e-08;3!CL:0000723;7.37e-08;61!CL:0000048;8.98e-08;58!CL:0002320;2.22e-07;188!CL:0000346;2.30e-07;3!CL:1000428;2.30e-07;3!CL:0000327;2.68e-07;15!CL:0002521;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.58e-19,76;CL:0000048,4.36e-18,427;CL:0000723,1.56e-17,433;CL:0000034,8.13e-17,441;CL:0002320,2.31e-15,361;CL:0000134,7.68e-12,354;CL:0000499,1.90e-11,28;CL:0002559,3.18e-11,5;CL:0000219,2.23e-10,386;CL:0002570,2.46e-09,8;CL:0002552,3.20e-09,5;CL:0000135,4.20e-08,3;CL:0000388,4.20e-08,3;CL:0002521,1.33e-07,3;CL:0000346,1.51e-07,3;CL:1000428,1.51e-07,3;CL:0000327,3.12e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.15e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.78e-07,5;DOID:450,9.78e-07,5;DOID:66,9.78e-07,5;DOID:423,9.78e-07,5;DOID:0080000,9.78e-07,5;DOID:11722,9.78e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.08e-16!83;UBERON:0002329!3.08e-16!83;UBERON:0003077!3.08e-16!83;UBERON:0003059!3.08e-16!83;UBERON:0007282!3.08e-16!83;UBERON:0009618!3.08e-16!83;UBERON:0007285!3.08e-16!83;UBERON:0004290!8.69e-15!70;UBERON:0002199!3.88e-14!45;UBERON:0002416!3.88e-14!45;UBERON:0000486!1.16e-13!82;UBERON:0003102!2.70e-12!95;UBERON:0001134!7.35e-11!61;UBERON:0002036!7.35e-11!61;UBERON:0003082!7.35e-11!61;UBERON:0002385!9.75e-11!63;UBERON:0001015!9.75e-11!63;UBERON:0000383!9.75e-11!63;UBERON:0002097!1.61e-10!40;UBERON:0001013!2.51e-10!14;UBERON:0005256!7.56e-10!143;UBERON:0002384!4.26e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.23e-14;14!UBERON:0002072;3.43e-11;5!UBERON:0002073;5.06e-11;5!UBERON:0004905;8.87e-09;8!UBERON:0000982;8.87e-09;8!UBERON:0004770;8.87e-09;8!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0007846;4.21e-08;3!UBERON:0000043;4.21e-08;3!UBERON:0007845;4.21e-08;3!UBERON:0003102;1.80e-07;50!UBERON:0000412;2.30e-07;3!UBERON:0001992;2.30e-07;3!UBERON:0002190;2.88e-07;3!UBERON:0002384;3.57e-07;198!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002204;7.98e-07;70 | |||
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|phase1_expression=0,1.07050261945492,0.422863212287913,3.00219895059391,1.34088328328186,0,2.53299878168311,1.89515962028049,3.65659879479774,0,0,0,0,1.23766352960047,3.31397375727916,1.34465029290355,1.80808358407193,2.19093027116212,1.46379839637152,0.123121058076788,1.02000345622126,0.626909442956176,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,1.0843174571537,0.50133791063589,2.60723734129483,1.5905718941022,0.973269740605272,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,6.02356903572509,0,0.560677600142307,0,1.2333377420858,0.622422070799533,0.538842688278752,0.326923806226917,0.454072282934794,1.15235184896,0.234321431833797,0.936480230490962,0,1.94283284717341,0.352303495931295,0.485618833104395,1.68540968042698,1.02077085627447,1.47401180774122,1.23990937410919,1.18800285728205,1.48360157567134,1.82032272387605,2.87447256726495,0.505008341862199,0.375355559615893,0,0.438977620880838,0.919463387397059,1.05166641234618,0,1.25572744982203,1.49490172172997,1.69545520927649,0.600182192168805,2.06105058476878,1.8034837803194,0.744467425326359,0.168776332241266,0.974370051611986,0.504867548488229,0.644349290496095,2.26304479546337,1.42003837006646,0.806016785821122,0.508681776931463,0,0,0,0,0.265059536642971,0.232387885739037,0,0.252320850875628,0.36497735907583,1.56449532329816,12.8648187638577,2.76269842704961,1.39310378409594,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,2.94017422771084,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,1.71072446022705,0.822619941626588,0.300343057843917,0,0.224262168690721,1.30788020649984,0.1466765716419,0.258543431515556,3.57656445851882,2.535908257668,0.26593811658487,0,0,1.41849132023278,0.266422179016099,1.00084595560703,1.62786481617433,0,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,1.30303176000821,1.84928690295345,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,1.2269149171914,0,2.17012018959788,0.415941723061614,1.78428988797162,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.553107505625109,1.30325421702124,1.17480694477644,4.11772108573027,0,0,0,0,0,0,0,0.153461973288062,1.12264037773229,0.256278298511402,0.511707249066704,0.321707842287215,4.45254199334973,2.46735510084249,2.66342587969691,0.328508624055237,2.07701771673448,4.06736324609857,0,0,0,0.68888668898764,2.1850940160806,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.457847324091717,0,0,0,0,0.96670718292122,1.54048617114644,1.07452572308291,0.827019434907183,0.537101224341368,1.0151168573996,0.340906509664404,1.69160867728801,0,0,0,0,0,3.77774816196768,0,0.616067160352178,0.532306030317022,0,1.29726953372744,0,0.372158369359667,0,0.571890581771475,0.255897791311334,0.855877976067841,0,0.78494864019923,0.719489830333259,1.37268514868027,0.471249609382746,0,0,0.842516912477962,0,1.70599442741899,2.11300293513511,0.409499734223957,1.41405431953713,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0.281695602532241,0.286822704408103,0.196498082026242,0,0,1.05553817648832,1.64647446479951,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0.227884111694002,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.941063278792687,0,0,2.23882204330311,3.27198633786114,1.66441758450784,1.89403005275089,1.0062716070103,0.889811221596536,0,2.26846385644859,1.08806040407946,0.591420599958536,0.318593534327405,0.899606224327209,1.55262956876259,1.24411862352257,1.59505028734797,1.04349012362347,0.751288044986092,0.761610424337591,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| |||
|short_description=p@chr21:47418307..47418324,+ | |||
}} |
Revision as of 10:48, 12 September 2013
Short description: | p@chr21:47418307..47418324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:47418307..47418324, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.58e-19 | 76 |
multi fate stem cell | 4.36e-18 | 427 |
somatic stem cell | 1.56e-17 | 433 |
stem cell | 8.13e-17 | 441 |
connective tissue cell | 2.31e-15 | 361 |
mesenchymal cell | 7.68e-12 | 354 |
stromal cell | 1.90e-11 | 28 |
hair follicle cell | 3.18e-11 | 5 |
motile cell | 2.23e-10 | 386 |
mesenchymal stem cell of adipose | 2.46e-09 | 8 |
fibroblast of gingiva | 3.20e-09 | 5 |
fibrocyte | 4.20e-08 | 3 |
tendon cell | 4.20e-08 | 3 |
subcutaneous fat cell | 1.33e-07 | 3 |
hair follicle dermal papilla cell | 1.51e-07 | 3 |
stem cell of epidermis | 1.51e-07 | 3 |
extracellular matrix secreting cell | 3.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.78e-07 | 5 |
myotonic disease | 9.78e-07 | 5 |
muscle tissue disease | 9.78e-07 | 5 |
myopathy | 9.78e-07 | 5 |
muscular disease | 9.78e-07 | 5 |
myotonic dystrophy | 9.78e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.