FFCP PHASE1:Hg19::chr1:70033759..70033766,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18531|TSSclassifier=W|UniProt=|association_with_transcript=-314bp_to_ENST00000310961_5end|coexpression_cluster_id=C10|description=CAGE_peak_18_at_LRRC7_5end|id=chr1:70033759..70033766,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;1.34e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!4.29e-72!34;UBERON:0002020!5.32e-72!34;UBERON:0003528!5.32e-72!34;UBERON:0002791!4.32e-69!33;UBERON:0001869!6.30e-67!32;UBERON:0002780!5.51e-63!41;UBERON:0001890!5.51e-63!41;UBERON:0006240!5.51e-63!41;UBERON:0003080!2.52e-61!42;UBERON:0001049!8.00e-60!57;UBERON:0005068!8.00e-60!57;UBERON:0006241!8.00e-60!57;UBERON:0007135!8.00e-60!57;UBERON:0001950!2.88e-59!20;UBERON:0002619!3.51e-59!22;UBERON:0001017!3.84e-55!82;UBERON:0005743!7.87e-55!86;UBERON:0002616!5.46e-54!59;UBERON:0000956!1.15e-51!25;UBERON:0000203!1.15e-51!25;UBERON:0000073!3.08e-51!94;UBERON:0001016!3.08e-51!94;UBERON:0000955!2.23e-50!69;UBERON:0006238!2.23e-50!69;UBERON:0003056!1.09e-45!61;UBERON:0003075!4.59e-44!86;UBERON:0007284!4.59e-44!86;UBERON:0002346!1.10e-41!90;UBERON:0007023!1.82e-38!115;UBERON:0000033!1.57e-29!123;UBERON:0000153!2.06e-29!129;UBERON:0007811!2.06e-29!129;UBERON:0004121!5.52e-27!169;UBERON:0000924!4.07e-26!173;UBERON:0006601!4.07e-26!173;UBERON:0002420!1.08e-21!9;UBERON:0007245!1.08e-21!9;UBERON:0010009!1.08e-21!9;UBERON:0010011!1.08e-21!9;UBERON:0000454!1.08e-21!9;UBERON:0002308!2.55e-21!9;UBERON:0000125!2.55e-21!9;UBERON:0000200!8.93e-20!6;UBERON:0001871!1.26e-19!7;UBERON:0001872!5.09e-17!5;UBERON:0002021!9.13e-17!5;UBERON:0000025!2.55e-16!194;UBERON:0009663!5.07e-16!7;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0000064!2.73e-13!219;UBERON:0000477!1.90e-12!286;UBERON:0004111!4.66e-12!241;UBERON:0002771!8.29e-11!3;UBERON:0000349!9.23e-11!5;UBERON:0000483!1.00e-10!309;UBERON:0000119!1.61e-10!312;UBERON:0005383!1.80e-10!3;UBERON:0005382!1.80e-10!3;UBERON:0006331!1.37e-09!3;UBERON:0000988!1.42e-09!3;UBERON:0000475!2.20e-09!365;UBERON:0000481!2.04e-08!347;UBERON:0001873!6.02e-08!2;UBERON:0010122!6.02e-08!2;UBERON:0001870!7.35e-08!2;UBERON:0000062!1.71e-07!511;UBERON:0001876!1.78e-07!2;UBERON:0002148!4.74e-07!2;UBERON:0009662!4.74e-07!2;UBERON:0000922!9.87e-07!612|ontology_enrichment_uberon_v019=UBERON:0001950;1.13e-53;20!UBERON:0002791;2.61e-50;32!UBERON:0002619;5.94e-49;22!UBERON:0001869;2.27e-48;32!UBERON:0001893;1.67e-45;34!UBERON:0003528;1.25e-44;34!UBERON:0002020;1.25e-44;34!UBERON:0000956;3.11e-43;25!UBERON:0000203;3.11e-43;25!UBERON:0002780;3.09e-29;41!UBERON:0001890;3.09e-29;41!UBERON:0001872;6.30e-26;5!UBERON:0001870;9.52e-20;3!UBERON:0000073;3.53e-16;53!UBERON:0002616;3.53e-16;53!UBERON:0001882;1.92e-15;1!UBERON:0005403;1.92e-15;1!UBERON:0000369;2.75e-15;4!UBERON:0002435;2.75e-15;4!UBERON:0000204;2.75e-15;4!UBERON:0000955;5.41e-15;68!UBERON:0001017;1.48e-13;75!UBERON:0002021;1.34e-12;5!UBERON:0000200;2.29e-10;6!UBERON:0001016;2.85e-09;83!UBERON:0001871;3.88e-09;6!UBERON:0009663;3.88e-09;7!UBERON:0001873;1.34e-08;2!UBERON:0002771;2.23e-08;2!UBERON:0002702;2.23e-08;2!UBERON:0002420;2.68e-07;9!UBERON:0000125;2.68e-07;9!UBERON:0007245;2.68e-07;9!UBERON:0002308;2.68e-07;9!UBERON:0010009;2.68e-07;9!UBERON:0010011;2.68e-07;9!UBERON:0000454;2.68e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.04e-53,20;UBERON:0002791,1.45e-50,32;UBERON:0001869,1.45e-50,32;UBERON:0002619,1.02e-48,22;UBERON:0003528,1.26e-47,34;UBERON:0002020,1.26e-47,34;UBERON:0001893,1.26e-47,34;UBERON:0000956,5.00e-43,25;UBERON:0000203,5.00e-43,25;UBERON:0002780,1.54e-39,41;UBERON:0001890,1.54e-39,41;UBERON:0003080,1.54e-39,41;UBERON:0006240,1.54e-39,41;UBERON:0000073,1.52e-30,53;UBERON:0002616,1.52e-30,53;UBERON:0001049,6.95e-29,56;UBERON:0005068,6.95e-29,56;UBERON:0006241,6.95e-29,56;UBERON:0007135,6.95e-29,56;UBERON:0000955,6.59e-28,68;UBERON:0006238,6.59e-28,68;UBERON:0001017,1.44e-27,81;UBERON:0003056,1.79e-26,61;UBERON:0001872,1.01e-25,5;UBERON:0001016,9.32e-25,89;UBERON:0003075,1.64e-19,82;UBERON:0007284,1.64e-19,82;UBERON:0001870,1.69e-19,3;UBERON:0002346,1.45e-18,86;UBERON:0001882,2.06e-15,1;UBERON:0005403,2.06e-15,1;UBERON:0000369,2.96e-15,4;UBERON:0002435,2.96e-15,4;UBERON:0000204,2.96e-15,4;UBERON:0010082,2.96e-15,4;UBERON:0010371,3.42e-15,104;UBERON:0002021,1.34e-12,5;UBERON:0004121,1.71e-12,171;UBERON:0000924,1.71e-12,171;UBERON:0006601,1.71e-12,171;UBERON:0010314,9.50e-12,132;UBERON:0011216,6.13e-11,223;UBERON:0000200,2.64e-10,6;UBERON:0001871,3.58e-09,6;UBERON:0009663,4.04e-09,7;UBERON:0001873,1.39e-08,2;UBERON:0010122,1.39e-08,2;UBERON:0002771,2.00e-08,2;UBERON:0002702,3.08e-08,2;UBERON:0000025,1.04e-07,192;UBERON:0002420,2.77e-07,9;UBERON:0000125,2.77e-07,9;UBERON:0007245,2.77e-07,9;UBERON:0002308,2.77e-07,9;UBERON:0010009,2.77e-07,9;UBERON:0010011,2.77e-07,9;UBERON:0000454,2.77e-07,9;UBERON:0007023,2.94e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.844175070377856,0,0,0,0.87754158861589,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,1.001527445652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.28458450192919,2.8339315265117,0.319267718114302,0.615349092722265,2.01657356977374,0.553258019713743,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,1.44680757550829,1.01465296310251,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.339957450954573,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0.33639558774184,0.25458863311266,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p18@LRRC7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-314bp_to_ENST00000310961_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_18_at_LRRC7_5end | |||
|id=chr1:70033759..70033766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.34e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p18@LRRC7 | |||
}} |
Revision as of 06:38, 12 September 2013
Short description: | p18@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -314bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.