FFCP PHASE1:Hg19::chr19:3600549..3600592,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6915|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11608|TSSclassifier=S|UniProt=P21731|association_with_transcript=39bp_to_AY429110_5end|coexpression_cluster_id=C302|description=CAGE_peak_5_at_TBXA2R_5end|id=chr19:3600549..3600592,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002593;5.69e-21;2!CL:0002188;2.74e-09;5!CL:0002595;3.22e-09;5!CL:1000746;5.38e-07;7!CL:1000612;5.38e-07;7|ontology_enrichment_celltype_v019_2=CL:0002593,6.96e-21,2;CL:0002188,2.74e-09,5;CL:0002595,3.49e-09,5;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1240;4.67e-12;39!DOID:8692;4.71e-12;31|ontology_enrichment_disease_v019_2=DOID:8692,2.48e-12,31;DOID:1240,5.72e-10,39;DOID:2531,8.40e-08,51;DOID:0060083,8.40e-08,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002456;5.69e-21;2!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0000074;5.38e-07;7!UBERON:0001229;5.38e-07;7!UBERON:0003513;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.96e-21,2;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7;UBERON:0003513,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,1.59764275323235,1.88015874927628,0,0,0,0.201799707191048,0,0,0,0,0,12.1140619149265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p5@TBXA2R}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11608 | |||
|TSSclassifier=S | |||
|UniProt=P21731 | |||
|association_with_transcript=39bp_to_AY429110_5end | |||
|coexpression_cluster_id=C302 | |||
|description=CAGE_peak_5_at_TBXA2R_5end | |||
|id=chr19:3600549..3600592,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.69e-21;2!CL:0002188;2.74e-09;5!CL:0002595;3.22e-09;5!CL:1000746;5.38e-07;7!CL:1000612;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,6.96e-21,2;CL:0002188,2.74e-09,5;CL:0002595,3.49e-09,5;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;4.67e-12;39!DOID:8692;4.71e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.48e-12,31;DOID:1240,5.72e-10,39;DOID:2531,8.40e-08,51;DOID:0060083,8.40e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.69e-21;2!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0000074;5.38e-07;7!UBERON:0001229;5.38e-07;7!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.96e-21,2;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7;UBERON:0003513,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,1.59764275323235,1.88015874927628,0,0,0,0.201799707191048,0,0,0,0,0,12.1140619149265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@TBXA2R | |||
}} |
Revision as of 20:11, 11 September 2013
Short description: | p5@TBXA2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TBXA2R_5end |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | 39bp_to_AY429110_5end |
EntrezGene: | TBXA2R |
HGNC: | 11608 |
UniProt: | P21731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
glomerular endothelial cell | 2.74e-09 | 5 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 6.96e-21 | 2 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |
trunk blood vessel | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.48e-12 | 31 |
leukemia | 5.72e-10 | 39 |
hematologic cancer | 8.40e-08 | 51 |
immune system cancer | 8.40e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.