FFCP PHASE1:Hg19::chr18:53332502..53332511,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:53332502..53332511,+|id=chr18:53332502..53332511,+|ontology_enrichment_celltype=CL:0000319!1.60e-11!1|ontology_enrichment_celltype_v019=CL:0000319;3.16e-29;1!CL:0000054;1.78e-15;2!CL:0000137;1.78e-15;2!CL:0000092;1.78e-15;2!CL:0000159;2.37e-15;2!CL:1000415;2.37e-15;2|ontology_enrichment_celltype_v019_2=CL:0000319,4.20e-29,1;CL:0000054,1.78e-15,2;CL:0000137,1.78e-15,2;CL:0000092,1.78e-15,2;CL:1000415,2.05e-15,2;CL:0000159,2.74e-15,2|ontology_enrichment_development_v019=UBERON:0003124;3.16e-29;1|ontology_enrichment_disease=DOID:0060085!1.18e-11!1;DOID:3165!1.18e-11!1;DOID:0060121!1.18e-11!1;DOID:2438!1.18e-11!1;DOID:4418!1.18e-11!1;DOID:3030!1.60e-11!1;DOID:0050687!3.07e-08!143|ontology_enrichment_disease_v019=DOID:0060085;1.78e-29;1!DOID:3165;1.78e-29;1!DOID:0060121;1.78e-29;1!DOID:2438;1.78e-29;1!DOID:4418;1.78e-29;1!DOID:3030;3.16e-29;1!DOID:200;1.78e-15;2!DOID:4305;1.78e-15;2!DOID:5409;1.70e-08;4!DOID:0060072;2.11e-08;4|ontology_enrichment_disease_v019_2=DOID:0060085,1.78e-29,1;DOID:3165,1.78e-29,1;DOID:0060121,1.78e-29,1;DOID:2438,1.78e-29,1;DOID:4418,1.78e-29,1;DOID:3030,4.20e-29,1;DOID:200,1.78e-15,2;DOID:4305,1.78e-15,2;DOID:5409,1.70e-08,4;DOID:0060072,2.11e-08,4|ontology_enrichment_uberon=UBERON:0001282!1.06e-11!1;UBERON:0009842!1.06e-11!1;UBERON:0003704!1.06e-11!1;UBERON:0001171!1.06e-11!1;UBERON:0001172!1.06e-11!1;UBERON:0002294!8.61e-07!7;UBERON:0001173!8.61e-07!7;UBERON:0004912!8.61e-07!7|ontology_enrichment_uberon_v019=UBERON:0001282;1.15e-29;1!UBERON:0009842;1.15e-29;1!UBERON:0003704;1.15e-29;1!UBERON:0001171;1.15e-29;1!UBERON:0001172;1.15e-29;1!UBERON:0002294;3.86e-17;7!UBERON:0001173;3.86e-17;7!UBERON:0001280;7.78e-11;3!UBERON:0004647;7.78e-11;3!UBERON:0002110;1.09e-10;3!UBERON:0002394;1.89e-08;4!UBERON:0003928;1.89e-08;4!UBERON:0000014;2.11e-08;4!UBERON:0001987;2.43e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.33e-29,1;UBERON:0009842,1.33e-29,1;UBERON:0003704,1.33e-29,1;UBERON:0001171,1.33e-29,1;UBERON:0001172,1.33e-29,1;UBERON:0002294,1.40e-13,9;UBERON:0001173,1.40e-13,9;UBERON:0004912,1.40e-13,9;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0000014,2.11e-08,4;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21585606633904,0.46112780877612,0,4.45454224880233,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18586072873289,0,0,1.92381168603681,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1327366812669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:53332502..53332511,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:53332502..53332511,+ | |||
|id=chr18:53332502..53332511,+ | |||
|ontology_enrichment_celltype=CL:0000319!1.60e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.16e-29;1!CL:0000054;1.78e-15;2!CL:0000137;1.78e-15;2!CL:0000092;1.78e-15;2!CL:0000159;2.37e-15;2!CL:1000415;2.37e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.20e-29,1;CL:0000054,1.78e-15,2;CL:0000137,1.78e-15,2;CL:0000092,1.78e-15,2;CL:1000415,2.05e-15,2;CL:0000159,2.74e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.16e-29;1 | |||
|ontology_enrichment_disease=DOID:0060085!1.18e-11!1;DOID:3165!1.18e-11!1;DOID:0060121!1.18e-11!1;DOID:2438!1.18e-11!1;DOID:4418!1.18e-11!1;DOID:3030!1.60e-11!1;DOID:0050687!3.07e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.78e-29;1!DOID:3165;1.78e-29;1!DOID:0060121;1.78e-29;1!DOID:2438;1.78e-29;1!DOID:4418;1.78e-29;1!DOID:3030;3.16e-29;1!DOID:200;1.78e-15;2!DOID:4305;1.78e-15;2!DOID:5409;1.70e-08;4!DOID:0060072;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.78e-29,1;DOID:3165,1.78e-29,1;DOID:0060121,1.78e-29,1;DOID:2438,1.78e-29,1;DOID:4418,1.78e-29,1;DOID:3030,4.20e-29,1;DOID:200,1.78e-15,2;DOID:4305,1.78e-15,2;DOID:5409,1.70e-08,4;DOID:0060072,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.06e-11!1;UBERON:0009842!1.06e-11!1;UBERON:0003704!1.06e-11!1;UBERON:0001171!1.06e-11!1;UBERON:0001172!1.06e-11!1;UBERON:0002294!8.61e-07!7;UBERON:0001173!8.61e-07!7;UBERON:0004912!8.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.15e-29;1!UBERON:0009842;1.15e-29;1!UBERON:0003704;1.15e-29;1!UBERON:0001171;1.15e-29;1!UBERON:0001172;1.15e-29;1!UBERON:0002294;3.86e-17;7!UBERON:0001173;3.86e-17;7!UBERON:0001280;7.78e-11;3!UBERON:0004647;7.78e-11;3!UBERON:0002110;1.09e-10;3!UBERON:0002394;1.89e-08;4!UBERON:0003928;1.89e-08;4!UBERON:0000014;2.11e-08;4!UBERON:0001987;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.33e-29,1;UBERON:0009842,1.33e-29,1;UBERON:0003704,1.33e-29,1;UBERON:0001171,1.33e-29,1;UBERON:0001172,1.33e-29,1;UBERON:0002294,1.40e-13,9;UBERON:0001173,1.40e-13,9;UBERON:0004912,1.40e-13,9;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0000014,2.11e-08,4;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21585606633904,0.46112780877612,0,4.45454224880233,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18586072873289,0,0,1.92381168603681,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1327366812669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:53332502..53332511,+ | |||
}} |
Revision as of 17:46, 11 September 2013
Short description: | p@chr18:53332502..53332511, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:53332502..53332511, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.20e-29 | 1 |
bone matrix secreting cell | 1.78e-15 | 2 |
osteocyte | 1.78e-15 | 2 |
osteoclast | 1.78e-15 | 2 |
epithelial cell of gall bladder | 2.05e-15 | 2 |
seromucus secreting cell | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.33e-29 | 1 |
acinus | 1.33e-29 | 1 |
intrahepatic bile duct | 1.33e-29 | 1 |
portal lobule | 1.33e-29 | 1 |
hepatic acinus | 1.33e-29 | 1 |
biliary system | 1.40e-13 | 9 |
biliary tree | 1.40e-13 | 9 |
biliary bud | 1.40e-13 | 9 |
liver parenchyma | 8.17e-11 | 3 |
liver lobule | 8.17e-11 | 3 |
hepatic duct | 8.17e-11 | 3 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
zone of skin | 2.11e-08 | 4 |
placenta | 2.43e-08 | 4 |
allantois | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.78e-29 | 1 |
skin benign neoplasm | 1.78e-29 | 1 |
integumentary system benign neoplasm | 1.78e-29 | 1 |
dermis tumor | 1.78e-29 | 1 |
cutaneous fibrous histiocytoma | 1.78e-29 | 1 |
mucinous adenocarcinoma | 4.20e-29 | 1 |
giant cell tumor | 1.78e-15 | 2 |
bone giant cell tumor | 1.78e-15 | 2 |
lung small cell carcinoma | 1.70e-08 | 4 |
benign neoplasm | 2.11e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.