FFCP PHASE1:Hg19::chr18:33058506..33058536,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2458|description=CAGE_peak_at_chr18:33058506..33058536,-|id=chr18:33058506..33058536,-|ontology_enrichment_celltype=CL:0000548!8.32e-22!679;CL:0000004!8.32e-22!679;CL:0000255!8.32e-22!679;CL:0000012!2.69e-21!682;CL:0000063!4.37e-20!578;CL:0002371!3.60e-17!591;CL:0000003!2.29e-15!722;CL:0000066!2.39e-15!254;CL:0000144!1.80e-14!625;CL:0002076!3.97e-08!43;CL:0002057!1.09e-07!42;CL:0000860!1.31e-07!45;CL:0000223!3.75e-07!59;CL:0002368!3.90e-07!13;CL:0002194!4.71e-07!63;CL:0000576!4.71e-07!63;CL:0000040!4.71e-07!63;CL:0000559!4.71e-07!63;CL:0002009!5.97e-07!65|ontology_enrichment_celltype_v019=CL:0002159;7.85e-12;14!CL:0000473;3.57e-11;39!CL:0000234;3.57e-11;39!CL:0000860;5.69e-11;33!CL:0002057;5.69e-11;33!CL:1000449;1.87e-09;15!CL:0002077;1.79e-08;34!CL:0000244;2.07e-08;4!CL:0000731;2.07e-08;4!CL:1000497;4.51e-08;17!CL:0002518;4.51e-08;17!CL:1000507;7.09e-08;10!CL:1000494;7.09e-08;10!CL:0002681;7.14e-08;12!CL:0002584;7.14e-08;12!CL:0002551;2.07e-07;6!CL:0002621;8.58e-07;3!CL:0002202;9.47e-07;9!CL:0002632;9.47e-07;9!CL:0002166;9.94e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-14,253;CL:0000473,4.29e-13,48;CL:0000234,4.29e-13,48;CL:0002159,6.28e-12,14;CL:0000860,6.50e-12,42;CL:0002057,6.50e-12,42;CL:0002077,1.64e-09,34;CL:1000449,1.83e-09,15;CL:0002194,3.44e-09,59;CL:0000576,3.44e-09,59;CL:0000040,3.44e-09,59;CL:0000559,3.44e-09,59;CL:0002009,1.07e-08,61;CL:0000244,2.18e-08,4;CL:0000731,2.18e-08,4;CL:1000497,4.42e-08,17;CL:0002518,4.42e-08,17;CL:0000766,5.80e-08,72;CL:1000507,6.24e-08,10;CL:1000494,6.24e-08,10;CL:0002681,7.79e-08,12;CL:0002584,7.79e-08,12;CL:0000839,1.33e-07,66;CL:0000557,2.09e-07,67;CL:0002551,2.54e-07,6;CL:0002076,6.77e-07,42;CL:0002202,7.32e-07,9;CL:0002632,7.32e-07,9;CL:0002621,8.70e-07,3|ontology_enrichment_development_v019=CL:0002057;1.87e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000923!4.37e-07!604;UBERON:0005291!4.37e-07!604;UBERON:0006598!4.37e-07!604;UBERON:0002532!4.37e-07!604;UBERON:0002050!5.55e-07!605;UBERON:0005423!5.55e-07!605|ontology_enrichment_uberon_v019=UBERON:0001801;2.48e-10;14!UBERON:0010371;2.62e-10;31!UBERON:0006555;1.87e-09;15!UBERON:0004819;1.87e-09;15!UBERON:0001285;1.87e-09;15!UBERON:0007684;1.87e-09;15!UBERON:0000019;1.30e-08;19!UBERON:0000047;1.30e-08;19!UBERON:0004088;1.30e-08;19!UBERON:0010230;1.30e-08;19!UBERON:0007625;1.43e-08;11!UBERON:0006554;3.13e-08;30!UBERON:0001008;3.13e-08;30!UBERON:0000970;4.72e-08;20!UBERON:0004211;7.09e-08;10!UBERON:0009773;7.09e-08;10!UBERON:0001231;7.09e-08;10!UBERON:0004810;7.09e-08;10!UBERON:0001225;7.14e-08;12!UBERON:0008987;7.14e-08;12!UBERON:0001444;1.01e-07;48!UBERON:0002104;1.51e-07;21!UBERON:0001456;1.51e-07;21!UBERON:0000486;2.89e-07;12!UBERON:0000488;6.62e-07;4!UBERON:0001949;8.58e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000033,3.34e-11,56;UBERON:0001801,2.33e-10,14;UBERON:0005085,3.24e-10,31;UBERON:0001444,1.11e-09,49;UBERON:0005423,1.31e-09,581;UBERON:0000153,1.74e-09,62;UBERON:0007811,1.74e-09,62;UBERON:0004211,1.83e-09,15;UBERON:0009773,1.83e-09,15;UBERON:0001231,1.83e-09,15;UBERON:0001285,1.83e-09,15;UBERON:0007684,1.83e-09,15;UBERON:0004208,1.83e-09,15;UBERON:0000922,6.34e-09,592;UBERON:0006555,9.96e-09,16;UBERON:0004819,9.96e-09,16;UBERON:0007625,1.16e-08,11;UBERON:0000019,4.37e-08,20;UBERON:0000047,4.37e-08,20;UBERON:0010312,4.37e-08,20;UBERON:0004088,4.37e-08,20;UBERON:0010230,4.37e-08,20;UBERON:0003072,4.37e-08,20;UBERON:0004128,4.37e-08,20;UBERON:0003071,4.37e-08,20;UBERON:0001434,5.89e-08,100;UBERON:0004810,6.24e-08,10;UBERON:0001225,7.79e-08,12;UBERON:0008987,7.79e-08,12;UBERON:0000970,1.40e-07,21;UBERON:0002104,1.40e-07,21;UBERON:0000076,1.84e-07,8;UBERON:0004765,2.26e-07,90;UBERON:0002371,3.03e-07,76;UBERON:0001456,4.04e-07,22;UBERON:0002050,4.44e-07,564;UBERON:0000488,4.65e-07,4;UBERON:0001949,8.70e-07,3|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,5.24259293112413,1.31883489114227,0,0,0,0,0,0,0,0,0,0,1.23186982565596,0.251085279189606,0.305653622991805,0.410502947249729,0.472264687882075,0.786728553697808,1.15148819429164,2.32224184974114,8.27479102031034,2.71085326900425,1.84877005083394,0,0,0,1.10799081706375,2.00544447470142,1.95309783644267,0,0,0,0.290796477559129,0,0,2.32429036905685,0,3.40677007984614,1.7261543539329,1.2808035326455,6.62150243688039,2.06847408441971,4.51839278508678,2.70852973188684,0.564727018627814,0,0.674170453335254,0,1.60464513538047,4.47535988059329,0.329851300186716,0.598390972864896,2.13112375266347,3.19230162491442,0,0.622822248995575,2.76373531782418,2.60741459210101,4.77815458351257,2.42159801053347,5.15588690382591,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2458 | |||
|description=CAGE_peak_at_chr18:33058506..33058536,- | |||
|id=chr18:33058506..33058536,- | |||
|ontology_enrichment_celltype=CL:0000548!8.32e-22!679;CL:0000004!8.32e-22!679;CL:0000255!8.32e-22!679;CL:0000012!2.69e-21!682;CL:0000063!4.37e-20!578;CL:0002371!3.60e-17!591;CL:0000003!2.29e-15!722;CL:0000066!2.39e-15!254;CL:0000144!1.80e-14!625;CL:0002076!3.97e-08!43;CL:0002057!1.09e-07!42;CL:0000860!1.31e-07!45;CL:0000223!3.75e-07!59;CL:0002368!3.90e-07!13;CL:0002194!4.71e-07!63;CL:0000576!4.71e-07!63;CL:0000040!4.71e-07!63;CL:0000559!4.71e-07!63;CL:0002009!5.97e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.85e-12;14!CL:0000473;3.57e-11;39!CL:0000234;3.57e-11;39!CL:0000860;5.69e-11;33!CL:0002057;5.69e-11;33!CL:1000449;1.87e-09;15!CL:0002077;1.79e-08;34!CL:0000244;2.07e-08;4!CL:0000731;2.07e-08;4!CL:1000497;4.51e-08;17!CL:0002518;4.51e-08;17!CL:1000507;7.09e-08;10!CL:1000494;7.09e-08;10!CL:0002681;7.14e-08;12!CL:0002584;7.14e-08;12!CL:0002551;2.07e-07;6!CL:0002621;8.58e-07;3!CL:0002202;9.47e-07;9!CL:0002632;9.47e-07;9!CL:0002166;9.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-14,253;CL:0000473,4.29e-13,48;CL:0000234,4.29e-13,48;CL:0002159,6.28e-12,14;CL:0000860,6.50e-12,42;CL:0002057,6.50e-12,42;CL:0002077,1.64e-09,34;CL:1000449,1.83e-09,15;CL:0002194,3.44e-09,59;CL:0000576,3.44e-09,59;CL:0000040,3.44e-09,59;CL:0000559,3.44e-09,59;CL:0002009,1.07e-08,61;CL:0000244,2.18e-08,4;CL:0000731,2.18e-08,4;CL:1000497,4.42e-08,17;CL:0002518,4.42e-08,17;CL:0000766,5.80e-08,72;CL:1000507,6.24e-08,10;CL:1000494,6.24e-08,10;CL:0002681,7.79e-08,12;CL:0002584,7.79e-08,12;CL:0000839,1.33e-07,66;CL:0000557,2.09e-07,67;CL:0002551,2.54e-07,6;CL:0002076,6.77e-07,42;CL:0002202,7.32e-07,9;CL:0002632,7.32e-07,9;CL:0002621,8.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000923!4.37e-07!604;UBERON:0005291!4.37e-07!604;UBERON:0006598!4.37e-07!604;UBERON:0002532!4.37e-07!604;UBERON:0002050!5.55e-07!605;UBERON:0005423!5.55e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;2.48e-10;14!UBERON:0010371;2.62e-10;31!UBERON:0006555;1.87e-09;15!UBERON:0004819;1.87e-09;15!UBERON:0001285;1.87e-09;15!UBERON:0007684;1.87e-09;15!UBERON:0000019;1.30e-08;19!UBERON:0000047;1.30e-08;19!UBERON:0004088;1.30e-08;19!UBERON:0010230;1.30e-08;19!UBERON:0007625;1.43e-08;11!UBERON:0006554;3.13e-08;30!UBERON:0001008;3.13e-08;30!UBERON:0000970;4.72e-08;20!UBERON:0004211;7.09e-08;10!UBERON:0009773;7.09e-08;10!UBERON:0001231;7.09e-08;10!UBERON:0004810;7.09e-08;10!UBERON:0001225;7.14e-08;12!UBERON:0008987;7.14e-08;12!UBERON:0001444;1.01e-07;48!UBERON:0002104;1.51e-07;21!UBERON:0001456;1.51e-07;21!UBERON:0000486;2.89e-07;12!UBERON:0000488;6.62e-07;4!UBERON:0001949;8.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000033,3.34e-11,56;UBERON:0001801,2.33e-10,14;UBERON:0005085,3.24e-10,31;UBERON:0001444,1.11e-09,49;UBERON:0005423,1.31e-09,581;UBERON:0000153,1.74e-09,62;UBERON:0007811,1.74e-09,62;UBERON:0004211,1.83e-09,15;UBERON:0009773,1.83e-09,15;UBERON:0001231,1.83e-09,15;UBERON:0001285,1.83e-09,15;UBERON:0007684,1.83e-09,15;UBERON:0004208,1.83e-09,15;UBERON:0000922,6.34e-09,592;UBERON:0006555,9.96e-09,16;UBERON:0004819,9.96e-09,16;UBERON:0007625,1.16e-08,11;UBERON:0000019,4.37e-08,20;UBERON:0000047,4.37e-08,20;UBERON:0010312,4.37e-08,20;UBERON:0004088,4.37e-08,20;UBERON:0010230,4.37e-08,20;UBERON:0003072,4.37e-08,20;UBERON:0004128,4.37e-08,20;UBERON:0003071,4.37e-08,20;UBERON:0001434,5.89e-08,100;UBERON:0004810,6.24e-08,10;UBERON:0001225,7.79e-08,12;UBERON:0008987,7.79e-08,12;UBERON:0000970,1.40e-07,21;UBERON:0002104,1.40e-07,21;UBERON:0000076,1.84e-07,8;UBERON:0004765,2.26e-07,90;UBERON:0002371,3.03e-07,76;UBERON:0001456,4.04e-07,22;UBERON:0002050,4.44e-07,564;UBERON:0000488,4.65e-07,4;UBERON:0001949,8.70e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,5.24259293112413,1.31883489114227,0,0,0,0,0,0,0,0,0,0,1.23186982565596,0.251085279189606,0.305653622991805,0.410502947249729,0.472264687882075,0.786728553697808,1.15148819429164,2.32224184974114,8.27479102031034,2.71085326900425,1.84877005083394,0,0,0,1.10799081706375,2.00544447470142,1.95309783644267,0,0,0,0.290796477559129,0,0,2.32429036905685,0,3.40677007984614,1.7261543539329,1.2808035326455,6.62150243688039,2.06847408441971,4.51839278508678,2.70852973188684,0.564727018627814,0,0.674170453335254,0,1.60464513538047,4.47535988059329,0.329851300186716,0.598390972864896,2.13112375266347,3.19230162491442,0,0.622822248995575,2.76373531782418,2.60741459210101,4.77815458351257,2.42159801053347,5.15588690382591,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,1.5905718941022,0,1.89069634328136,3.76939975686359,3.07421749925941,0,9.4716774956061,3.70784442784429,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0.371457501329565,1.78886166630035,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0,1.20848795132744,0.760272105718513,0,0,0,0.714397826272638,0.44905874525234,0.900891843866578,0,8.54339093611316,1.64881569537367,0,0,4.79703457356788,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.622422070799533,0.67355336034844,0.163461903113459,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,1.1409436430889,2.24173020827702,8.80758739828237,5.34180716414834,7.72479436862367,1.02077085627447,1.35117749042945,0.103325781175765,0,0,0.910161361938026,0.718618141816238,4.54507507675979,1.25118519871964,4.15596173226274,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0.169560592310488,10.6293469239813,9.00062197949754,5.16248271700207,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.674338760312407,0.482022059766964,0.220587945464788,0.435758888184812,0.71181185733329,0.674156540800822,0.392442930250692,2.30848294167834,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.122988438543114,2.57351715447788,14.2675371031213,10.1161577931858,15.1798748341563,6.94413338688972,0,2.07986957055916,7.21656710126366,2.66639931442677,0.70445216541493,0,0,0,0,0,0.246217006087397,1.17002132569619,1.0404181360211,6.56136837907439,11.5907668457213,6.66342957039216,2.23896306757121,13.0785272331283,4.98397482914775,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,2.46688385559794,0,4.400297149257,0.258543431515556,0,0.845302752556,0,0,0.514414748524284,2.83698264046557,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,2.43247561282381,0,0,1.4377491329495,0,0,0,0,0.358121926479791,0.224170287987055,0.591092280605782,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0,0.215714200818617,0.320182673410333,0,0,0,0.496215615637554,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,1.80455823272956,0.644566922551274,0,0,0,4.51199612907412,7.39347236202382,3.13739907670742,0,2.95544560900052,1.13733384070897,3.06168669497728,0.215915916102139,1.54227252690289,0,0,8.92066955657634,3.3243040357149,1.34324852833307,0,0,3.84675187674584,0,0,0,0,0,1.72279661398852,2.60024098414608,0,0,0.308097234229289,0.767518373630648,1.51620229732984,0,0.290033387828457,0.596586391912706,0,0.991709492165869,0.192190067365106,9.95379157457756,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,1.48863347743867,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.717056761020258,0.196498082026242,0,0.709522128141196,0.211107635297664,0,0,0,7.79399113076648,7.37332503089366,4.3556393944529,0,14.2066772981506,5.05414427002877,4.43430153536676,11.7158934105549,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,1.43176155503017,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0.163232808159148,0,0,0,0,0,0.296521128680622,0.370691816839509,1.35748534357092,0,0,0,0,0,7.52619176555688,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.941798755221676,0,0,0,0,1.07791637155815,0.174118413160805,0,0,0.19351266257817,0,0.164230914106418,0.290967049465258,0,0,2.19267079434801,0,0.0633107959558787,0,4.16825865307975,0,0,0,0,0,2.16082196982225,0.124252535565433,0,0.407712618220842,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.551482276150566,0.494495150286999,0.6066318946876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| |||
|short_description=p@chr18:33058506..33058536,- | |||
}} |
Revision as of 17:20, 11 September 2013
Short description: | p@chr18:33058506..33058536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:33058506..33058536, - |
Coexpression cluster: | C2458_Small_Keratinocyte_CD14_Urothelial_nasal_Mammary_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-14 | 253 |
defensive cell | 4.29e-13 | 48 |
phagocyte | 4.29e-13 | 48 |
general ecto-epithelial cell | 6.28e-12 | 14 |
classical monocyte | 6.50e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.50e-12 | 42 |
ecto-epithelial cell | 1.64e-09 | 34 |
epithelial cell of nephron | 1.83e-09 | 15 |
monopoietic cell | 3.44e-09 | 59 |
monocyte | 3.44e-09 | 59 |
monoblast | 3.44e-09 | 59 |
promonocyte | 3.44e-09 | 59 |
macrophage dendritic cell progenitor | 1.07e-08 | 61 |
transitional epithelial cell | 2.18e-08 | 4 |
urothelial cell | 2.18e-08 | 4 |
kidney cell | 4.42e-08 | 17 |
kidney epithelial cell | 4.42e-08 | 17 |
myeloid leukocyte | 5.80e-08 | 72 |
kidney tubule cell | 6.24e-08 | 10 |
nephron tubule epithelial cell | 6.24e-08 | 10 |
kidney cortical cell | 7.79e-08 | 12 |
renal cortical epithelial cell | 7.79e-08 | 12 |
myeloid lineage restricted progenitor cell | 1.33e-07 | 66 |
granulocyte monocyte progenitor cell | 2.09e-07 | 67 |
fibroblast of dermis | 2.54e-07 | 6 |
endo-epithelial cell | 6.77e-07 | 42 |
epithelial cell of tracheobronchial tree | 7.32e-07 | 9 |
epithelial cell of lower respiratory tract | 7.32e-07 | 9 |
gingival epithelial cell | 8.70e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.