FFCP PHASE1:Hg19::chr18:21693351..21693370,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=125488|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26595|TSSclassifier=S|UniProt=G3V1P2|association_with_transcript=34bp_to_ENST00000540918_5end|coexpression_cluster_id=C5|description=CAGE_peak_13_at_TTC39C_5end|id=chr18:21693351..21693370,+|ontology_enrichment_celltype=CL:0000181!8.89e-23!12;CL:0000417!8.89e-23!12;CL:0000668!8.89e-23!12;CL:0000414!8.89e-23!12;CL:0000412!8.89e-23!12;CL:0000182!8.89e-23!12;CL:0000223!7.97e-10!59|ontology_enrichment_celltype_v019=CL:0000182;1.94e-39;12!CL:0002553;2.25e-14;1|ontology_enrichment_celltype_v019_2=CL:0000182,1.94e-39,12;CL:0002553,2.41e-14,1;CL:0000223,5.87e-08,58|ontology_enrichment_development_v019=UBERON:0004161;4.30e-43;11!UBERON:0009497;1.88e-36;13!UBERON:0001041;1.13e-15;30!UBERON:0003104;8.84e-15;31!UBERON:0006242;1.72e-14;1|ontology_enrichment_disease=DOID:305!7.75e-09!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009497!1.88e-23!25;UBERON:0000015!1.88e-23!25;UBERON:0002423!1.88e-23!25;UBERON:0006235!1.88e-23!25;UBERON:0004161!1.88e-23!25;UBERON:0008835!1.44e-22!22;UBERON:0003894!1.44e-22!22;UBERON:0002107!5.34e-22!19;UBERON:0006925!5.34e-22!19;UBERON:0008836!5.34e-22!19;UBERON:0009854!1.74e-21!23;UBERON:0007499!1.40e-19!25;UBERON:0000949!5.18e-19!45;UBERON:0002368!5.98e-19!35;UBERON:0009856!9.77e-19!26;UBERON:0005057!1.57e-15!26;UBERON:0003929!3.47e-15!54;UBERON:0000988!4.83e-13!3;UBERON:0002365!1.06e-12!31;UBERON:0002330!1.06e-12!31;UBERON:0002298!1.30e-12!8;UBERON:0004921!2.47e-12!129;UBERON:0004185!2.47e-12!129;UBERON:0004733!8.17e-12!12;UBERON:0002028!8.17e-12!12;UBERON:0007277!8.17e-12!12;UBERON:0002530!8.29e-12!59;UBERON:0004732!7.32e-11!13;UBERON:0003296!1.07e-10!4;UBERON:0010133!1.07e-10!4;UBERON:0001007!1.68e-10!155;UBERON:0001555!1.68e-10!155;UBERON:0007026!1.68e-10!155;UBERON:0001041!2.66e-10!98;UBERON:0005911!2.99e-10!82;UBERON:0000077!6.45e-10!130;UBERON:0000007!8.44e-10!2;UBERON:0000481!1.04e-09!347;UBERON:0002148!1.85e-09!2;UBERON:0009662!1.85e-09!2;UBERON:0003076!2.45e-09!15;UBERON:0003057!2.45e-09!15;UBERON:0005172!2.81e-09!55;UBERON:0005173!2.81e-09!55;UBERON:0004119!3.44e-09!169;UBERON:0000925!3.44e-09!169;UBERON:0006595!3.44e-09!169;UBERON:0002417!4.03e-08!61;UBERON:0000916!4.03e-08!61;UBERON:0002680!1.39e-07!9;UBERON:0001895!1.39e-07!9;UBERON:0010092!1.39e-07!9;UBERON:0001737!1.49e-07!9;UBERON:0001048!1.93e-07!168;UBERON:0000025!2.75e-07!194;UBERON:0000062!9.48e-07!511;UBERON:0000477!9.90e-07!286|ontology_enrichment_uberon_v019=UBERON:0002107;4.57e-44;19!UBERON:0006925;4.57e-44;19!UBERON:0002423;4.38e-42;25!UBERON:0002368;1.40e-28;33!UBERON:0002365;8.92e-26;31!UBERON:0002330;8.92e-26;31!UBERON:0000949;2.84e-24;43!UBERON:0005172;2.16e-11;52!UBERON:0005173;2.16e-11;52!UBERON:0002530;1.22e-10;57!UBERON:0002417;1.73e-10;58!UBERON:0000916;1.73e-10;58!UBERON:0001905;5.37e-08;2!UBERON:0002757;5.37e-08;2!UBERON:0010134;5.37e-08;2!UBERON:0005408;5.37e-08;2!UBERON:0001899;5.37e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.57e-44,19;UBERON:0006925,4.57e-44,19;UBERON:0008836,4.57e-44,19;UBERON:0009497,4.27e-42,25;UBERON:0000015,4.27e-42,25;UBERON:0002423,4.27e-42,25;UBERON:0006235,4.27e-42,25;UBERON:0004161,4.27e-42,25;UBERON:0008835,5.53e-38,22;UBERON:0003894,5.53e-38,22;UBERON:0009854,2.62e-36,23;UBERON:0007499,2.33e-33,25;UBERON:0009856,4.72e-32,26;UBERON:0002368,6.77e-30,35;UBERON:0000949,2.07e-28,45;UBERON:0002365,8.73e-27,31;UBERON:0002330,8.73e-27,31;UBERON:0003929,4.73e-19,54;UBERON:0005172,4.73e-19,54;UBERON:0005173,4.73e-19,54;UBERON:0002530,2.18e-17,59;UBERON:0002417,4.67e-17,60;UBERON:0000916,4.67e-17,60;UBERON:0005911,4.16e-15,82;UBERON:0005177,1.23e-14,101;UBERON:0001041,1.87e-11,87;UBERON:0009569,9.32e-11,112;UBERON:0003914,2.84e-08,117;UBERON:0004921,4.19e-08,118;UBERON:0001905,5.37e-08,2;UBERON:0002757,5.37e-08,2;UBERON:0010134,5.37e-08,2;UBERON:0005408,5.37e-08,2;UBERON:0001899,5.37e-08,2;UBERON:0001007,5.65e-08,145;UBERON:0001555,5.65e-08,145;UBERON:0007026,5.65e-08,145;UBERON:0005256,6.84e-08,122;UBERON:0001048,3.61e-07,160;UBERON:0004119,4.07e-07,160;UBERON:0000925,4.07e-07,160;UBERON:0006595,4.07e-07,160;UBERON:0000025,4.82e-07,192;UBERON:0002100,9.11e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,19.0132552232746,2.94848165003288,17.7236972004421,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=125488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |||
|TSSclassifier=S | |||
|UniProt=G3V1P2 | |||
|association_with_transcript=34bp_to_ENST00000540918_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_TTC39C_5end | |||
|id=chr18:21693351..21693370,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.89e-23!12;CL:0000417!8.89e-23!12;CL:0000668!8.89e-23!12;CL:0000414!8.89e-23!12;CL:0000412!8.89e-23!12;CL:0000182!8.89e-23!12;CL:0000223!7.97e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-39;12!CL:0002553;2.25e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.94e-39,12;CL:0002553,2.41e-14,1;CL:0000223,5.87e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.30e-43;11!UBERON:0009497;1.88e-36;13!UBERON:0001041;1.13e-15;30!UBERON:0003104;8.84e-15;31!UBERON:0006242;1.72e-14;1 | |||
|ontology_enrichment_disease=DOID:305!7.75e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.88e-23!25;UBERON:0000015!1.88e-23!25;UBERON:0002423!1.88e-23!25;UBERON:0006235!1.88e-23!25;UBERON:0004161!1.88e-23!25;UBERON:0008835!1.44e-22!22;UBERON:0003894!1.44e-22!22;UBERON:0002107!5.34e-22!19;UBERON:0006925!5.34e-22!19;UBERON:0008836!5.34e-22!19;UBERON:0009854!1.74e-21!23;UBERON:0007499!1.40e-19!25;UBERON:0000949!5.18e-19!45;UBERON:0002368!5.98e-19!35;UBERON:0009856!9.77e-19!26;UBERON:0005057!1.57e-15!26;UBERON:0003929!3.47e-15!54;UBERON:0000988!4.83e-13!3;UBERON:0002365!1.06e-12!31;UBERON:0002330!1.06e-12!31;UBERON:0002298!1.30e-12!8;UBERON:0004921!2.47e-12!129;UBERON:0004185!2.47e-12!129;UBERON:0004733!8.17e-12!12;UBERON:0002028!8.17e-12!12;UBERON:0007277!8.17e-12!12;UBERON:0002530!8.29e-12!59;UBERON:0004732!7.32e-11!13;UBERON:0003296!1.07e-10!4;UBERON:0010133!1.07e-10!4;UBERON:0001007!1.68e-10!155;UBERON:0001555!1.68e-10!155;UBERON:0007026!1.68e-10!155;UBERON:0001041!2.66e-10!98;UBERON:0005911!2.99e-10!82;UBERON:0000077!6.45e-10!130;UBERON:0000007!8.44e-10!2;UBERON:0000481!1.04e-09!347;UBERON:0002148!1.85e-09!2;UBERON:0009662!1.85e-09!2;UBERON:0003076!2.45e-09!15;UBERON:0003057!2.45e-09!15;UBERON:0005172!2.81e-09!55;UBERON:0005173!2.81e-09!55;UBERON:0004119!3.44e-09!169;UBERON:0000925!3.44e-09!169;UBERON:0006595!3.44e-09!169;UBERON:0002417!4.03e-08!61;UBERON:0000916!4.03e-08!61;UBERON:0002680!1.39e-07!9;UBERON:0001895!1.39e-07!9;UBERON:0010092!1.39e-07!9;UBERON:0001737!1.49e-07!9;UBERON:0001048!1.93e-07!168;UBERON:0000025!2.75e-07!194;UBERON:0000062!9.48e-07!511;UBERON:0000477!9.90e-07!286 | |||
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|short_description=p13@TTC39C | |||
}} |
Revision as of 17:03, 11 September 2013
Short description: | p13@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TTC39C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 34bp_to_ENST00000540918_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | G3V1P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.94e-39 | 12 |
lung fibroblast | 2.41e-14 | 1 |
endodermal cell | 5.87e-08 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.