FFCP PHASE1:Hg19::chr17:74049720..74049747,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6730|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11302|TSSclassifier=S|UniProt=B3KUU5,Q96K97|association_with_transcript=0bp_to_ENST00000542536,uc002jqj.1_5end|coexpression_cluster_id=C68|description=CAGE_peak_3_at_SRP68_5end|id=chr17:74049720..74049747,-|ontology_enrichment_celltype=CL:0000066!1.95e-11!254;CL:0002076!6.41e-10!43;CL:0000223!1.70e-07!59;CL:0002368!6.83e-07!13;CL:0002274!9.87e-07!5;CL:0000457!9.87e-07!5;CL:0002191!9.87e-07!5;CL:0000097!9.87e-07!5;CL:0000831!9.87e-07!5;CL:0002028!9.87e-07!5|ontology_enrichment_celltype_v019=CL:0000097;1.98e-21;5!CL:0000349;2.97e-16;19!CL:0002536;5.80e-14;2!CL:0000163;5.50e-12;9!CL:0002541;7.46e-10;3!CL:0002336;1.22e-07;1!CL:0002261;1.22e-07;1!CL:0002170;1.22e-07;1|ontology_enrichment_celltype_v019_2=CL:0000097,1.94e-21,5;CL:0002028,1.94e-21,5;CL:0000349,2.17e-16,19;CL:0002536,4.47e-14,2;CL:0000163,5.44e-12,9;CL:0002541,5.49e-10,3;CL:0002336,1.11e-07,1;CL:0002261,1.11e-07,1;CL:0002170,1.11e-07,1|ontology_enrichment_development_v019=UBERON:0009143;5.15e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.40e-14!14;UBERON:0000158!3.40e-14!14;UBERON:0004119!1.70e-11!169;UBERON:0000925!1.70e-11!169;UBERON:0006595!1.70e-11!169;UBERON:0003124!5.71e-09!7;UBERON:0001007!4.84e-08!155;UBERON:0001555!4.84e-08!155;UBERON:0007026!4.84e-08!155;UBERON:0001008!9.09e-08!45;UBERON:0005177!1.06e-07!107;UBERON:0000464!1.41e-07!104;UBERON:0000064!1.77e-07!219;UBERON:0005178!1.83e-07!34;UBERON:0002224!1.83e-07!34;UBERON:0005181!3.82e-07!35;UBERON:0000062!4.15e-07!511;UBERON:0000478!4.64e-07!24;UBERON:0000077!4.89e-07!130;UBERON:0000058!6.01e-07!26;UBERON:0006554!6.35e-07!44;UBERON:0000305!6.39e-07!7|ontology_enrichment_uberon_v019=UBERON:0005631;1.46e-23;10!UBERON:0000158;1.46e-23;10!UBERON:0000305;1.56e-15;7!UBERON:0000478;1.09e-12;24!UBERON:0003124;7.46e-10;3!UBERON:0000920;7.46e-10;3!UBERON:0007029;5.15e-08;1!UBERON:0000996;5.15e-08;1!UBERON:0004913;1.22e-07;1!UBERON:0003703;1.22e-07;1!UBERON:0001174;1.22e-07;1!UBERON:0004914;1.22e-07;1!UBERON:0002394;2.06e-07;4!UBERON:0003928;2.06e-07;4!UBERON:0003343;3.12e-07;4!UBERON:0004785;3.12e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.53e-22,14;UBERON:0000158,1.53e-22,14;UBERON:0000305,1.34e-15,7;UBERON:0004871,1.14e-13,8;UBERON:0000478,8.51e-13,24;UBERON:0000920,5.49e-10,3;UBERON:0003124,4.35e-09,7;UBERON:0004923,3.64e-08,66;UBERON:0000996,4.66e-08,1;UBERON:0007029,6.10e-08,1;UBERON:0004913,1.18e-07,1;UBERON:0003703,1.18e-07,1;UBERON:0001174,1.18e-07,1;UBERON:0004914,1.18e-07,1;UBERON:0003343,4.29e-07,4;UBERON:0004785,4.29e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,1.52908960491121,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.527008714158756,0.130979075497713,0.728590576585084,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,1.48141512253647,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,1.32072651019839,2.48793738648926,2.73827911492227,9.72066737383126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0.254876273045038,1.66215201785745,0.447749509444357,0,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,1.4098700508785,1.12284324244932,0,0,0,0,10.2660128437207,0.593929361665277,18.7368028280532,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.808815160325942,2.32727527078292,1.02314474045374,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,1.27126825146383,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.692552326534174,0,0,0.0897576444097721,0.108647371922008,2.87101043758728,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |||
|TSSclassifier=S | |||
|UniProt=B3KUU5,Q96K97 | |||
|association_with_transcript=0bp_to_ENST00000542536,uc002jqj.1_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_SRP68_5end | |||
|id=chr17:74049720..74049747,- | |||
|ontology_enrichment_celltype=CL:0000066!1.95e-11!254;CL:0002076!6.41e-10!43;CL:0000223!1.70e-07!59;CL:0002368!6.83e-07!13;CL:0002274!9.87e-07!5;CL:0000457!9.87e-07!5;CL:0002191!9.87e-07!5;CL:0000097!9.87e-07!5;CL:0000831!9.87e-07!5;CL:0002028!9.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-21;5!CL:0000349;2.97e-16;19!CL:0002536;5.80e-14;2!CL:0000163;5.50e-12;9!CL:0002541;7.46e-10;3!CL:0002336;1.22e-07;1!CL:0002261;1.22e-07;1!CL:0002170;1.22e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.94e-21,5;CL:0002028,1.94e-21,5;CL:0000349,2.17e-16,19;CL:0002536,4.47e-14,2;CL:0000163,5.44e-12,9;CL:0002541,5.49e-10,3;CL:0002336,1.11e-07,1;CL:0002261,1.11e-07,1;CL:0002170,1.11e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.15e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.40e-14!14;UBERON:0000158!3.40e-14!14;UBERON:0004119!1.70e-11!169;UBERON:0000925!1.70e-11!169;UBERON:0006595!1.70e-11!169;UBERON:0003124!5.71e-09!7;UBERON:0001007!4.84e-08!155;UBERON:0001555!4.84e-08!155;UBERON:0007026!4.84e-08!155;UBERON:0001008!9.09e-08!45;UBERON:0005177!1.06e-07!107;UBERON:0000464!1.41e-07!104;UBERON:0000064!1.77e-07!219;UBERON:0005178!1.83e-07!34;UBERON:0002224!1.83e-07!34;UBERON:0005181!3.82e-07!35;UBERON:0000062!4.15e-07!511;UBERON:0000478!4.64e-07!24;UBERON:0000077!4.89e-07!130;UBERON:0000058!6.01e-07!26;UBERON:0006554!6.35e-07!44;UBERON:0000305!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.46e-23;10!UBERON:0000158;1.46e-23;10!UBERON:0000305;1.56e-15;7!UBERON:0000478;1.09e-12;24!UBERON:0003124;7.46e-10;3!UBERON:0000920;7.46e-10;3!UBERON:0007029;5.15e-08;1!UBERON:0000996;5.15e-08;1!UBERON:0004913;1.22e-07;1!UBERON:0003703;1.22e-07;1!UBERON:0001174;1.22e-07;1!UBERON:0004914;1.22e-07;1!UBERON:0002394;2.06e-07;4!UBERON:0003928;2.06e-07;4!UBERON:0003343;3.12e-07;4!UBERON:0004785;3.12e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.53e-22,14;UBERON:0000158,1.53e-22,14;UBERON:0000305,1.34e-15,7;UBERON:0004871,1.14e-13,8;UBERON:0000478,8.51e-13,24;UBERON:0000920,5.49e-10,3;UBERON:0003124,4.35e-09,7;UBERON:0004923,3.64e-08,66;UBERON:0000996,4.66e-08,1;UBERON:0007029,6.10e-08,1;UBERON:0004913,1.18e-07,1;UBERON:0003703,1.18e-07,1;UBERON:0001174,1.18e-07,1;UBERON:0004914,1.18e-07,1;UBERON:0003343,4.29e-07,4;UBERON:0004785,4.29e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,1.52908960491121,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.527008714158756,0.130979075497713,0.728590576585084,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,1.48141512253647,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,1.32072651019839,2.48793738648926,2.73827911492227,9.72066737383126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0.254876273045038,1.66215201785745,0.447749509444357,0,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,1.4098700508785,1.12284324244932,0,0,0,0,10.2660128437207,0.593929361665277,18.7368028280532,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.808815160325942,2.32727527078292,1.02314474045374,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,1.27126825146383,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.692552326534174,0,0,0.0897576444097721,0.108647371922008,2.87101043758728,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.569219092059585,0,0.347119476670262,0.587954384486266,0,0,0,0,0,0,2.32773639572207,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,4.71388069233591,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.104909176269996,0.528001682597033,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06172751012966,0.183428598521679,1.27078232765372,0,0,0,0,0,0,0,0.327543835020193,1.47856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.638812138197976,1.60710550763486,0.672567444437648,0,0,0.443511850813194,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0.33639558774184,3.6278880218554,0.404234377916439,0.870866991587845,0,0.875576689189638,0.430333232356058,0,0,0,0,0.449126010532934,0,0.122241444182866,0,2.66302709674205,0,0 | |||
|short_description=p3@SRP68 | |||
}} |
Revision as of 15:45, 11 September 2013
Short description: | p3@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SRP68_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000542536, uc002jqj.1_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | B3KUU5Q96K97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.94e-21 | 5 |
basophil mast progenitor cell | 1.94e-21 | 5 |
extraembryonic cell | 2.17e-16 | 19 |
amniotic epithelial cell | 4.47e-14 | 2 |
endocrine cell | 5.44e-12 | 9 |
chorionic membrane mesenchymal stem cell | 5.49e-10 | 3 |
buccal mucosa cell | 1.11e-07 | 1 |
endothelial cell of viscerocranial mucosa | 1.11e-07 | 1 |
keratinized cell of the oral mucosa | 1.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.53e-22 | 14 |
membranous layer | 1.53e-22 | 14 |
amnion | 1.34e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.14e-13 | 8 |
extraembryonic structure | 8.51e-13 | 24 |
egg chorion | 5.49e-10 | 3 |
chorion | 4.35e-09 | 7 |
organ component layer | 3.64e-08 | 66 |
vagina | 4.66e-08 | 1 |
surface | 6.10e-08 | 1 |
hepatopancreatic ampulla | 1.18e-07 | 1 |
extrahepatic bile duct | 1.18e-07 | 1 |
common bile duct | 1.18e-07 | 1 |
duodenal papilla | 1.18e-07 | 1 |
mucosa of oral region | 4.29e-07 | 4 |
respiratory system mucosa | 4.29e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.