FFCP PHASE1:Hg19::chr17:7164410..7164457,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1366|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2049|TSSclassifier=W|UniProt=|association_with_transcript=-261bp_to_AK225418_5end|description=CAGE_peak_3_at_CLDN7_5end|id=chr17:7164410..7164457,-|ontology_enrichment_celltype=CL:0000066!3.48e-35!254;CL:0000223!6.96e-18!59;CL:0002076!2.50e-16!43;CL:0002368!1.81e-09!13;CL:0002251!1.18e-07!21|ontology_enrichment_celltype_v019=CL:0002076;3.62e-16;42!CL:0002368;2.05e-13;13!CL:1000507;1.89e-08;10!CL:1000494;1.89e-08;10!CL:0002202;2.40e-08;9!CL:0002632;2.40e-08;9!CL:1000449;4.35e-08;15!CL:0002251;5.25e-08;20!CL:1000497;7.34e-07;17!CL:0002518;7.34e-07;17|ontology_enrichment_celltype_v019_2=CL:0000066,2.01e-35,253;CL:0000223,5.19e-22,58;CL:0002076,1.80e-20,42;CL:0002368,2.17e-13,13;CL:1000507,1.55e-08,10;CL:1000494,1.55e-08,10;CL:0002202,2.34e-08,9;CL:0002632,2.34e-08,9;CL:1000449,3.45e-08,15;CL:0002251,6.16e-08,20;CL:1000497,6.03e-07,17;CL:0002518,6.03e-07,17|ontology_enrichment_development_v019=UBERON:0008947;1.64e-13;29!CL:0000223;5.84e-13;58!UBERON:0006595;9.80e-10;86|ontology_enrichment_disease=DOID:305!2.14e-21!106;DOID:0050687!2.19e-14!143|ontology_enrichment_disease_v019=DOID:299;1.98e-08;25!DOID:305;4.22e-07;106|ontology_enrichment_disease_v019_2=DOID:305,9.38e-20,106;DOID:0050687,2.32e-14,143;DOID:299,1.62e-08,25|ontology_enrichment_uberon=UBERON:0004119!1.26e-30!169;UBERON:0000925!1.26e-30!169;UBERON:0006595!1.26e-30!169;UBERON:0001007!6.79e-25!155;UBERON:0001555!6.79e-25!155;UBERON:0007026!6.79e-25!155;UBERON:0004921!3.47e-23!129;UBERON:0004185!3.47e-23!129;UBERON:0001004!1.11e-19!72;UBERON:0000077!1.20e-18!130;UBERON:0001041!1.89e-17!98;UBERON:0000466!1.13e-16!126;UBERON:0000065!2.40e-16!53;UBERON:0005911!1.60e-14!82;UBERON:0008947!4.33e-14!38;UBERON:0003258!4.33e-14!38;UBERON:0000464!1.27e-13!104;UBERON:0005177!7.18e-13!107;UBERON:0000072!1.41e-12!46;UBERON:0001048!3.23e-10!168;UBERON:0003104!4.43e-10!238;UBERON:0009142!4.43e-10!238;UBERON:0009569!7.15e-10!113;UBERON:0006554!5.29e-09!44;UBERON:0001737!6.02e-09!9;UBERON:0005178!6.28e-09!34;UBERON:0002224!6.28e-09!34;UBERON:0001008!1.41e-08!45;UBERON:0005181!1.99e-08!35;UBERON:0000481!5.10e-08!347;UBERON:0003929!6.48e-08!54;UBERON:0000058!9.39e-08!26;UBERON:0000161!1.54e-07!35;UBERON:0007196!3.96e-07!14;UBERON:0001558!3.96e-07!14;UBERON:0000063!4.39e-07!97;UBERON:0005153!4.55e-07!37;UBERON:0001557!5.22e-07!19|ontology_enrichment_uberon_v019=UBERON:0000065;7.02e-16;44!UBERON:0000072;5.56e-15;37!UBERON:0001737;4.74e-14;9!UBERON:0001557;4.74e-14;9!UBERON:0001004;2.32e-12;65!UBERON:0004921;3.83e-09;33!UBERON:0006554;7.84e-09;30!UBERON:0001008;7.84e-09;30!UBERON:0004211;1.89e-08;10!UBERON:0009773;1.89e-08;10!UBERON:0001231;1.89e-08;10!UBERON:0004810;1.89e-08;10!UBERON:0004807;2.45e-08;22!UBERON:0005178;3.23e-08;34!UBERON:0002224;3.23e-08;34!UBERON:0006555;4.35e-08;15!UBERON:0004819;4.35e-08;15!UBERON:0001285;4.35e-08;15!UBERON:0007684;4.35e-08;15!UBERON:0005911;4.97e-08;36!UBERON:0005181;1.14e-07;35!UBERON:0007196;6.50e-07;15!UBERON:0001558;6.50e-07;15!UBERON:0000486;8.40e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.50e-34,160;UBERON:0000925,3.50e-34,160;UBERON:0006595,3.50e-34,160;UBERON:0001007,2.87e-28,145;UBERON:0001555,2.87e-28,145;UBERON:0007026,2.87e-28,145;UBERON:0004921,3.34e-27,118;UBERON:0001041,1.03e-22,87;UBERON:0001004,2.73e-21,74;UBERON:0008947,1.63e-18,38;UBERON:0003258,1.63e-18,38;UBERON:0000065,2.97e-18,54;UBERON:0005911,8.90e-15,82;UBERON:0005177,1.01e-14,101;UBERON:0000072,1.35e-14,47;UBERON:0001737,4.38e-14,9;UBERON:0009569,4.97e-12,112;UBERON:0011216,7.65e-10,223;UBERON:0005178,3.56e-09,34;UBERON:0002224,3.56e-09,34;UBERON:0006555,4.06e-09,16;UBERON:0004819,4.06e-09,16;UBERON:0006554,5.26e-09,47;UBERON:0005181,8.92e-09,35;UBERON:0001008,1.07e-08,48;UBERON:0004810,1.55e-08,10;UBERON:0004211,3.45e-08,15;UBERON:0009773,3.45e-08,15;UBERON:0001231,3.45e-08,15;UBERON:0001285,3.45e-08,15;UBERON:0007684,3.45e-08,15;UBERON:0004208,3.45e-08,15;UBERON:0001557,8.70e-08,19;UBERON:0005172,8.81e-08,54;UBERON:0005173,8.81e-08,54;UBERON:0001048,1.02e-07,160;UBERON:0003929,2.22e-07,54;UBERON:0007196,5.94e-07,15;UBERON:0001558,5.94e-07,15;UBERON:0002113,9.03e-07,26;UBERON:0003918,9.03e-07,26;UBERON:0011143,9.03e-07,26;UBERON:0005095,9.03e-07,26;UBERON:0007687,9.03e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,8.84642171405432,28.6098478868695,0.655324116390517,1.31883489114227,0.123766352960047,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,5.51652734687356,0.90361775633475,8.13458822366933,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0.95569624297229,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.1756695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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1366 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2049 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-261bp_to_AK225418_5end | |||
|description=CAGE_peak_3_at_CLDN7_5end | |||
|id=chr17:7164410..7164457,- | |||
|ontology_enrichment_celltype=CL:0000066!3.48e-35!254;CL:0000223!6.96e-18!59;CL:0002076!2.50e-16!43;CL:0002368!1.81e-09!13;CL:0002251!1.18e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.62e-16;42!CL:0002368;2.05e-13;13!CL:1000507;1.89e-08;10!CL:1000494;1.89e-08;10!CL:0002202;2.40e-08;9!CL:0002632;2.40e-08;9!CL:1000449;4.35e-08;15!CL:0002251;5.25e-08;20!CL:1000497;7.34e-07;17!CL:0002518;7.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.01e-35,253;CL:0000223,5.19e-22,58;CL:0002076,1.80e-20,42;CL:0002368,2.17e-13,13;CL:1000507,1.55e-08,10;CL:1000494,1.55e-08,10;CL:0002202,2.34e-08,9;CL:0002632,2.34e-08,9;CL:1000449,3.45e-08,15;CL:0002251,6.16e-08,20;CL:1000497,6.03e-07,17;CL:0002518,6.03e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.64e-13;29!CL:0000223;5.84e-13;58!UBERON:0006595;9.80e-10;86 | |||
|ontology_enrichment_disease=DOID:305!2.14e-21!106;DOID:0050687!2.19e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:299;1.98e-08;25!DOID:305;4.22e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.38e-20,106;DOID:0050687,2.32e-14,143;DOID:299,1.62e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.26e-30!169;UBERON:0000925!1.26e-30!169;UBERON:0006595!1.26e-30!169;UBERON:0001007!6.79e-25!155;UBERON:0001555!6.79e-25!155;UBERON:0007026!6.79e-25!155;UBERON:0004921!3.47e-23!129;UBERON:0004185!3.47e-23!129;UBERON:0001004!1.11e-19!72;UBERON:0000077!1.20e-18!130;UBERON:0001041!1.89e-17!98;UBERON:0000466!1.13e-16!126;UBERON:0000065!2.40e-16!53;UBERON:0005911!1.60e-14!82;UBERON:0008947!4.33e-14!38;UBERON:0003258!4.33e-14!38;UBERON:0000464!1.27e-13!104;UBERON:0005177!7.18e-13!107;UBERON:0000072!1.41e-12!46;UBERON:0001048!3.23e-10!168;UBERON:0003104!4.43e-10!238;UBERON:0009142!4.43e-10!238;UBERON:0009569!7.15e-10!113;UBERON:0006554!5.29e-09!44;UBERON:0001737!6.02e-09!9;UBERON:0005178!6.28e-09!34;UBERON:0002224!6.28e-09!34;UBERON:0001008!1.41e-08!45;UBERON:0005181!1.99e-08!35;UBERON:0000481!5.10e-08!347;UBERON:0003929!6.48e-08!54;UBERON:0000058!9.39e-08!26;UBERON:0000161!1.54e-07!35;UBERON:0007196!3.96e-07!14;UBERON:0001558!3.96e-07!14;UBERON:0000063!4.39e-07!97;UBERON:0005153!4.55e-07!37;UBERON:0001557!5.22e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;7.02e-16;44!UBERON:0000072;5.56e-15;37!UBERON:0001737;4.74e-14;9!UBERON:0001557;4.74e-14;9!UBERON:0001004;2.32e-12;65!UBERON:0004921;3.83e-09;33!UBERON:0006554;7.84e-09;30!UBERON:0001008;7.84e-09;30!UBERON:0004211;1.89e-08;10!UBERON:0009773;1.89e-08;10!UBERON:0001231;1.89e-08;10!UBERON:0004810;1.89e-08;10!UBERON:0004807;2.45e-08;22!UBERON:0005178;3.23e-08;34!UBERON:0002224;3.23e-08;34!UBERON:0006555;4.35e-08;15!UBERON:0004819;4.35e-08;15!UBERON:0001285;4.35e-08;15!UBERON:0007684;4.35e-08;15!UBERON:0005911;4.97e-08;36!UBERON:0005181;1.14e-07;35!UBERON:0007196;6.50e-07;15!UBERON:0001558;6.50e-07;15!UBERON:0000486;8.40e-07;12 | |||
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| |||
|short_description=p3@CLDN7 | |||
}} |
Revision as of 15:27, 11 September 2013
Short description: | p3@CLDN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CLDN7_5end |
Coexpression cluster: | NA |
Association with transcript: | -261bp_to_AK225418_5end |
EntrezGene: | CLDN7 |
HGNC: | 2049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.01e-35 | 253 |
endodermal cell | 5.19e-22 | 58 |
endo-epithelial cell | 1.80e-20 | 42 |
respiratory epithelial cell | 2.17e-13 | 13 |
kidney tubule cell | 1.55e-08 | 10 |
nephron tubule epithelial cell | 1.55e-08 | 10 |
epithelial cell of tracheobronchial tree | 2.34e-08 | 9 |
epithelial cell of lower respiratory tract | 2.34e-08 | 9 |
epithelial cell of nephron | 3.45e-08 | 15 |
epithelial cell of alimentary canal | 6.16e-08 | 20 |
kidney cell | 6.03e-07 | 17 |
kidney epithelial cell | 6.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.38e-20 | 106 |
cell type cancer | 2.32e-14 | 143 |
adenocarcinoma | 1.62e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.