FFCP PHASE1:Hg19::chr17:41327736..41327748,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-66bp_to_CU679501_5end|coexpression_cluster_id=C55|description=CAGE_peak_3_at_CU679501_5end|id=chr17:41327736..41327748,+|ontology_enrichment_celltype=CL:0000181!7.76e-12!12;CL:0000417!7.76e-12!12;CL:0000668!7.76e-12!12;CL:0000414!7.76e-12!12;CL:0000412!7.76e-12!12;CL:0000182!7.76e-12!12;CL:0002581!4.87e-10!1|ontology_enrichment_celltype_v019=CL:0000182;4.93e-53;12!CL:0002581;2.70e-40;1|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0002581,2.21e-40,1;CL:0000223,1.28e-11,58|ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.30e-21;31!CL:0000223;1.40e-07;58|ontology_enrichment_disease=DOID:114!4.46e-18!2;DOID:178!5.79e-10!1;DOID:326!5.79e-10!1;DOID:3978!5.79e-10!1;DOID:3394!5.79e-10!1;DOID:5844!5.79e-10!1;DOID:1287!1.69e-09!4;DOID:7!1.65e-07!39|ontology_enrichment_disease_v019=DOID:7;1.06e-15;39|ontology_enrichment_disease_v019_2=DOID:7,6.34e-17,39|ontology_enrichment_uberon=UBERON:0005057!2.56e-11!26;UBERON:0002107!3.54e-11!19;UBERON:0006925!3.54e-11!19;UBERON:0008836!3.54e-11!19;UBERON:0008835!1.25e-09!22;UBERON:0003894!1.25e-09!22;UBERON:0001301!1.48e-09!1;UBERON:0007190!2.67e-09!1;UBERON:0009854!3.35e-09!23;UBERON:0007499!1.90e-08!25;UBERON:0009497!1.90e-08!25;UBERON:0000015!1.90e-08!25;UBERON:0002423!1.90e-08!25;UBERON:0006235!1.90e-08!25;UBERON:0004161!1.90e-08!25;UBERON:0009856!4.08e-08!26;UBERON:0003135!3.69e-07!11;UBERON:0003929!5.97e-07!54;UBERON:0002365!9.03e-07!31;UBERON:0002330!9.03e-07!31;UBERON:0005172!9.18e-07!55;UBERON:0005173!9.18e-07!55|ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-34;19!UBERON:0006925;7.35e-34;19!UBERON:0002423;5.94e-26;25!UBERON:0005406;6.30e-21;2!UBERON:0002365;5.90e-20;31!UBERON:0002330;5.90e-20;31!UBERON:0002368;3.76e-18;33!UBERON:0000949;9.18e-14;43!UBERON:0002417;4.28e-09;58!UBERON:0000916;4.28e-09;58!UBERON:0002530;1.89e-07;57!UBERON:0005172;1.91e-07;52!UBERON:0005173;1.91e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.67e-34,19;UBERON:0006925,7.67e-34,19;UBERON:0008836,7.67e-34,19;UBERON:0008835,2.36e-29,22;UBERON:0003894,2.36e-29,22;UBERON:0009854,4.07e-28,23;UBERON:0007499,6.14e-26,25;UBERON:0009497,6.14e-26,25;UBERON:0000015,6.14e-26,25;UBERON:0002423,6.14e-26,25;UBERON:0006235,6.14e-26,25;UBERON:0004161,6.14e-26,25;UBERON:0009856,5.65e-25,26;UBERON:0002365,4.39e-21,31;UBERON:0002330,4.39e-21,31;UBERON:0005406,5.70e-21,2;UBERON:0002368,9.09e-19,35;UBERON:0000949,9.05e-15,45;UBERON:0003929,1.98e-12,54;UBERON:0005172,1.98e-12,54;UBERON:0005173,1.98e-12,54;UBERON:0002530,1.96e-11,59;UBERON:0002417,2.96e-11,60;UBERON:0000916,2.96e-11,60;UBERON:0005911,2.09e-08,82;UBERON:0001041,5.87e-08,87;UBERON:0005177,6.20e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0.429226048136571,0,0,0,1.16495949527454,2.9937609276745,3.04938676010316,3.1005630172925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.07577869821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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_CU679501_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_3_at_CU679501_5end | |||
|id=chr17:41327736..41327748,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.76e-12!12;CL:0000417!7.76e-12!12;CL:0000668!7.76e-12!12;CL:0000414!7.76e-12!12;CL:0000412!7.76e-12!12;CL:0000182!7.76e-12!12;CL:0002581!4.87e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.93e-53;12!CL:0002581;2.70e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0002581,2.21e-40,1;CL:0000223,1.28e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.30e-21;31!CL:0000223;1.40e-07;58 | |||
|ontology_enrichment_disease=DOID:114!4.46e-18!2;DOID:178!5.79e-10!1;DOID:326!5.79e-10!1;DOID:3978!5.79e-10!1;DOID:3394!5.79e-10!1;DOID:5844!5.79e-10!1;DOID:1287!1.69e-09!4;DOID:7!1.65e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:7;1.06e-15;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.34e-17,39 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.56e-11!26;UBERON:0002107!3.54e-11!19;UBERON:0006925!3.54e-11!19;UBERON:0008836!3.54e-11!19;UBERON:0008835!1.25e-09!22;UBERON:0003894!1.25e-09!22;UBERON:0001301!1.48e-09!1;UBERON:0007190!2.67e-09!1;UBERON:0009854!3.35e-09!23;UBERON:0007499!1.90e-08!25;UBERON:0009497!1.90e-08!25;UBERON:0000015!1.90e-08!25;UBERON:0002423!1.90e-08!25;UBERON:0006235!1.90e-08!25;UBERON:0004161!1.90e-08!25;UBERON:0009856!4.08e-08!26;UBERON:0003135!3.69e-07!11;UBERON:0003929!5.97e-07!54;UBERON:0002365!9.03e-07!31;UBERON:0002330!9.03e-07!31;UBERON:0005172!9.18e-07!55;UBERON:0005173!9.18e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-34;19!UBERON:0006925;7.35e-34;19!UBERON:0002423;5.94e-26;25!UBERON:0005406;6.30e-21;2!UBERON:0002365;5.90e-20;31!UBERON:0002330;5.90e-20;31!UBERON:0002368;3.76e-18;33!UBERON:0000949;9.18e-14;43!UBERON:0002417;4.28e-09;58!UBERON:0000916;4.28e-09;58!UBERON:0002530;1.89e-07;57!UBERON:0005172;1.91e-07;52!UBERON:0005173;1.91e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.67e-34,19;UBERON:0006925,7.67e-34,19;UBERON:0008836,7.67e-34,19;UBERON:0008835,2.36e-29,22;UBERON:0003894,2.36e-29,22;UBERON:0009854,4.07e-28,23;UBERON:0007499,6.14e-26,25;UBERON:0009497,6.14e-26,25;UBERON:0000015,6.14e-26,25;UBERON:0002423,6.14e-26,25;UBERON:0006235,6.14e-26,25;UBERON:0004161,6.14e-26,25;UBERON:0009856,5.65e-25,26;UBERON:0002365,4.39e-21,31;UBERON:0002330,4.39e-21,31;UBERON:0005406,5.70e-21,2;UBERON:0002368,9.09e-19,35;UBERON:0000949,9.05e-15,45;UBERON:0003929,1.98e-12,54;UBERON:0005172,1.98e-12,54;UBERON:0005173,1.98e-12,54;UBERON:0002530,1.96e-11,59;UBERON:0002417,2.96e-11,60;UBERON:0000916,2.96e-11,60;UBERON:0005911,2.09e-08,82;UBERON:0001041,5.87e-08,87;UBERON:0005177,6.20e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0.429226048136571,0,0,0,1.16495949527454,2.9937609276745,3.04938676010316,3.1005630172925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CU679501 | |||
}} |
Revision as of 13:48, 11 September 2013
Short description: | p3@CU679501 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CU679501_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -66bp_to_CU679501_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.27e-53 | 12 |
perirenal preadipocyte | 2.21e-40 | 1 |
endodermal cell | 1.28e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.67e-34 | 19 |
digestive gland | 7.67e-34 | 19 |
liver bud | 7.67e-34 | 19 |
hepatic diverticulum | 2.36e-29 | 22 |
liver primordium | 2.36e-29 | 22 |
digestive tract diverticulum | 4.07e-28 | 23 |
epithelial sac | 6.14e-26 | 25 |
epithelium of foregut-midgut junction | 6.14e-26 | 25 |
anatomical boundary | 6.14e-26 | 25 |
hepatobiliary system | 6.14e-26 | 25 |
foregut-midgut junction | 6.14e-26 | 25 |
septum transversum | 6.14e-26 | 25 |
sac | 5.65e-25 | 26 |
exocrine gland | 4.39e-21 | 31 |
exocrine system | 4.39e-21 | 31 |
perirenal fat | 5.70e-21 | 2 |
endocrine gland | 9.09e-19 | 35 |
endocrine system | 9.05e-15 | 45 |
gut epithelium | 1.98e-12 | 54 |
abdomen element | 1.98e-12 | 54 |
abdominal segment element | 1.98e-12 | 54 |
gland | 1.96e-11 | 59 |
abdominal segment of trunk | 2.96e-11 | 60 |
abdomen | 2.96e-11 | 60 |
endo-epithelium | 2.09e-08 | 82 |
foregut | 5.87e-08 | 87 |
trunk region element | 6.20e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.34e-17 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.