FFCP PHASE1:Hg19::chr17:19552140..19552151,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=224|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=403|TSSclassifier=S|UniProt=|association_with_transcript=-12bp_to_ENST00000472059_5end|description=CAGE_peak_3_at_ALDH3A2_5end|id=chr17:19552140..19552151,+|ontology_enrichment_celltype=CL:0000066!1.05e-13!254;CL:0000223!1.21e-10!59;CL:0002076!1.08e-07!43;CL:0002251!2.52e-07!21|ontology_enrichment_celltype_v019=CL:0000182;2.48e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.65e-07,12|ontology_enrichment_development_v019=UBERON:0001041;1.22e-07;30!UBERON:0008947;3.15e-07;29|ontology_enrichment_disease=DOID:305!4.27e-14!106;DOID:0050687!7.20e-10!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,3.54e-09,106|ontology_enrichment_uberon=UBERON:0001007!8.24e-15!155;UBERON:0001555!8.24e-15!155;UBERON:0007026!8.24e-15!155;UBERON:0004119!2.49e-14!169;UBERON:0000925!2.49e-14!169;UBERON:0006595!2.49e-14!169;UBERON:0004921!1.57e-11!129;UBERON:0004185!1.57e-11!129;UBERON:0001041!2.35e-10!98;UBERON:0000077!6.15e-10!130;UBERON:0001004!8.37e-09!72;UBERON:0000481!1.62e-07!347|ontology_enrichment_uberon_v019=UBERON:0004905;3.69e-09;8!UBERON:0000982;3.69e-09;8!UBERON:0004770;3.69e-09;8!UBERON:0011135;2.64e-08;5!UBERON:0002216;2.64e-08;5!UBERON:0011134;2.64e-08;5!UBERON:0002209;2.64e-08;5!UBERON:0002213;2.64e-08;5!UBERON:0007844;2.64e-08;5!UBERON:0011138;2.64e-08;5!UBERON:0001130;2.64e-08;5!UBERON:0001066;2.64e-08;5!UBERON:0001468;2.64e-08;5!UBERON:0002423;4.14e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001041,9.65e-10,87;UBERON:0004905,3.07e-09,8;UBERON:0000982,3.07e-09,8;UBERON:0004770,3.07e-09,8;UBERON:0001007,4.63e-09,145;UBERON:0001555,4.63e-09,145;UBERON:0007026,4.63e-09,145;UBERON:0001004,9.22e-09,74;UBERON:0011135,4.01e-08,5;UBERON:0002216,4.01e-08,5;UBERON:0011134,4.01e-08,5;UBERON:0002209,4.01e-08,5;UBERON:0002213,4.01e-08,5;UBERON:0005856,4.01e-08,5;UBERON:0005866,4.01e-08,5;UBERON:0005863,4.01e-08,5;UBERON:0007844,4.01e-08,5;UBERON:0011138,4.01e-08,5;UBERON:0001130,4.01e-08,5;UBERON:0001066,4.01e-08,5;UBERON:0001468,4.01e-08,5;UBERON:0004119,4.15e-08,160;UBERON:0000925,4.15e-08,160;UBERON:0006595,4.15e-08,160;UBERON:0009497,3.51e-07,25;UBERON:0000015,3.51e-07,25;UBERON:0002423,3.51e-07,25;UBERON:0006235,3.51e-07,25;UBERON:0004161,3.51e-07,25|phase1_expression=0,0.856402095563933,0.140954404095971,0,1.78784437770915,0,5.06599756336621,1.26343974685366,1.82829939739887,0.245733936501509,0,0,0,4.95065411840187,8.28493439319789,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0,0,1.10926203050036,0.46480320348181,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,0,1.77901850772711,0.853460445133014,0.400395987036012,0,0,1.90810750907073,0,1.17447437874188,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0,0.443067789167242,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,5.78302643815306,6.01605492763067,6.95263291011954,0,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,0.982343066232845,0.728590576585084,0.741568885568859,1.29818957461873,2.08955684759121,0.930705723632056,0,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0.183201743930407,0,0,0.872188104285069,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0.597794722207204,0,0,0.421352420106746,1.02077085627447,0.245668634623536,1.03325781175765,0,0,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0.226864366320042,0.179389635688862,0.640672166455702,0,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0.368199594569197,0.969876340912871,0,0.201504196455281,0.508681776931463,0.386521706326594,0.545492241181669,0.860413786167011,0.243947412259191,0.265059536642971,0.813357600086629,0.518305275076852,1.26160425437814,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,1.18306800039844,1.01150814046861,0.723033089650446,1.10293972732394,0.435758888184812,0.237270619111097,1.07865046528132,2.35465758150415,1.53898862778556,0,0,0,0,1.26755034821831,5.89696330006576,1.18157981336281,0,0.983907508344908,0.343135620597051,0.548751427043128,0,0.502644862058154,1.574003567695,0,1.03993478527958,0,0.34779121492523,0,0.144366447761074,0,0.380508304469197,0,0,0.738651018262192,2.10603838625314,0.445893486866185,1.87467667973554,0,0.2835501944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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=403 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000472059_5end | |||
|description=CAGE_peak_3_at_ALDH3A2_5end | |||
|id=chr17:19552140..19552151,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-13!254;CL:0000223!1.21e-10!59;CL:0002076!1.08e-07!43;CL:0002251!2.52e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.48e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.65e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.22e-07;30!UBERON:0008947;3.15e-07;29 | |||
|ontology_enrichment_disease=DOID:305!4.27e-14!106;DOID:0050687!7.20e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.54e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!8.24e-15!155;UBERON:0001555!8.24e-15!155;UBERON:0007026!8.24e-15!155;UBERON:0004119!2.49e-14!169;UBERON:0000925!2.49e-14!169;UBERON:0006595!2.49e-14!169;UBERON:0004921!1.57e-11!129;UBERON:0004185!1.57e-11!129;UBERON:0001041!2.35e-10!98;UBERON:0000077!6.15e-10!130;UBERON:0001004!8.37e-09!72;UBERON:0000481!1.62e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.69e-09;8!UBERON:0000982;3.69e-09;8!UBERON:0004770;3.69e-09;8!UBERON:0011135;2.64e-08;5!UBERON:0002216;2.64e-08;5!UBERON:0011134;2.64e-08;5!UBERON:0002209;2.64e-08;5!UBERON:0002213;2.64e-08;5!UBERON:0007844;2.64e-08;5!UBERON:0011138;2.64e-08;5!UBERON:0001130;2.64e-08;5!UBERON:0001066;2.64e-08;5!UBERON:0001468;2.64e-08;5!UBERON:0002423;4.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,9.65e-10,87;UBERON:0004905,3.07e-09,8;UBERON:0000982,3.07e-09,8;UBERON:0004770,3.07e-09,8;UBERON:0001007,4.63e-09,145;UBERON:0001555,4.63e-09,145;UBERON:0007026,4.63e-09,145;UBERON:0001004,9.22e-09,74;UBERON:0011135,4.01e-08,5;UBERON:0002216,4.01e-08,5;UBERON:0011134,4.01e-08,5;UBERON:0002209,4.01e-08,5;UBERON:0002213,4.01e-08,5;UBERON:0005856,4.01e-08,5;UBERON:0005866,4.01e-08,5;UBERON:0005863,4.01e-08,5;UBERON:0007844,4.01e-08,5;UBERON:0011138,4.01e-08,5;UBERON:0001130,4.01e-08,5;UBERON:0001066,4.01e-08,5;UBERON:0001468,4.01e-08,5;UBERON:0004119,4.15e-08,160;UBERON:0000925,4.15e-08,160;UBERON:0006595,4.15e-08,160;UBERON:0009497,3.51e-07,25;UBERON:0000015,3.51e-07,25;UBERON:0002423,3.51e-07,25;UBERON:0006235,3.51e-07,25;UBERON:0004161,3.51e-07,25 | |||
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| |||
|short_description=p3@ALDH3A2 | |||
}} |
Revision as of 12:33, 11 September 2013
Short description: | p3@ALDH3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ALDH3A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000472059_5end |
EntrezGene: | ALDH3A2 |
HGNC: | 403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.65e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
foregut | 9.65e-10 | 87 |
articulation | 3.07e-09 | 8 |
skeletal joint | 3.07e-09 | 8 |
articular system | 3.07e-09 | 8 |
digestive system | 4.63e-09 | 145 |
digestive tract | 4.63e-09 | 145 |
primitive gut | 4.63e-09 | 145 |
respiratory system | 9.22e-09 | 74 |
intervertebral cartilage | 4.01e-08 | 5 |
symphysis | 4.01e-08 | 5 |
nonsynovial joint | 4.01e-08 | 5 |
fibrous joint | 4.01e-08 | 5 |
cartilaginous joint | 4.01e-08 | 5 |
developing mesenchymal condensation | 4.01e-08 | 5 |
pre-cartilage condensation | 4.01e-08 | 5 |
cartilaginous condensation | 4.01e-08 | 5 |
cartilage element | 4.01e-08 | 5 |
post-cranial axial skeletal system | 4.01e-08 | 5 |
vertebral column | 4.01e-08 | 5 |
intervertebral disk | 4.01e-08 | 5 |
intervertebral joint | 4.01e-08 | 5 |
endoderm-derived structure | 4.15e-08 | 160 |
endoderm | 4.15e-08 | 160 |
presumptive endoderm | 4.15e-08 | 160 |
epithelium of foregut-midgut junction | 3.51e-07 | 25 |
anatomical boundary | 3.51e-07 | 25 |
hepatobiliary system | 3.51e-07 | 25 |
foregut-midgut junction | 3.51e-07 | 25 |
septum transversum | 3.51e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.54e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.