FFCP PHASE1:Hg19::chr16:81679150..81679182,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24319|TSSclassifier=W|UniProt=Q8IY22|association_with_transcript=187bp_to_uc002fgr.1_5end|coexpression_cluster_id=C323|description=CAGE_peak_17_at_CMIP_5end|id=chr16:81679150..81679182,+|ontology_enrichment_celltype=CL:0000349!1.18e-10!3;CL:0002577!1.18e-10!3;CL:0002536!1.25e-07!2|ontology_enrichment_celltype_v019=CL:0000349;7.12e-60;19!CL:0002577;7.23e-55;3!CL:0002536;6.23e-37;2!CL:0002537;3.12e-15;5!CL:0001014;2.37e-10;2!CL:0001016;2.37e-10;2!CL:0002541;2.55e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,6.59e-60,19;CL:0002577,7.24e-55,3;CL:0002536,4.73e-37,2;CL:0002537,3.35e-15,5;CL:0001014,2.49e-10,2;CL:0001016,2.49e-10,2;CL:0002541,2.47e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.05e-25!14;UBERON:0000158!1.05e-25!14;UBERON:0000478!1.68e-16!24;UBERON:0003124!4.66e-16!7;UBERON:0001987!4.56e-13!4;UBERON:0004340!4.56e-13!4;UBERON:0001049!1.30e-12!57;UBERON:0005068!1.30e-12!57;UBERON:0006241!1.30e-12!57;UBERON:0007135!1.30e-12!57;UBERON:0000305!1.62e-11!7;UBERON:0001017!1.23e-10!82;UBERON:0004871!5.13e-10!8;UBERON:0003075!5.89e-10!86;UBERON:0007284!5.89e-10!86;UBERON:0005743!6.49e-10!86;UBERON:0002346!2.73e-09!90;UBERON:0002616!3.01e-09!59;UBERON:0000073!1.63e-08!94;UBERON:0001016!1.63e-08!94;UBERON:0000955!2.41e-08!69;UBERON:0006238!2.41e-08!69;UBERON:0002780!2.97e-08!41;UBERON:0001890!2.97e-08!41;UBERON:0006240!2.97e-08!41;UBERON:0004121!3.76e-08!169;UBERON:0003080!5.35e-08!42;UBERON:0000924!8.36e-08!173;UBERON:0006601!8.36e-08!173;UBERON:0001893!3.50e-07!34;UBERON:0000007!3.77e-07!2;UBERON:0001950!5.17e-07!20;UBERON:0007023!5.59e-07!115|ontology_enrichment_uberon_v019=UBERON:0000478;2.27e-47;24!UBERON:0005631;1.06e-44;10!UBERON:0000158;1.06e-44;10!UBERON:0001987;2.20e-41;4!UBERON:0000305;4.01e-41;7!UBERON:0000007;3.27e-10;2!UBERON:0003124;2.55e-07;3!UBERON:0000920;2.55e-07;3!UBERON:0004923;9.72e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.48e-81,14;UBERON:0000158,2.48e-81,14;UBERON:0000478,2.13e-47,24;UBERON:0003124,1.21e-41,7;UBERON:0001987,2.20e-41,4;UBERON:0004340,2.20e-41,4;UBERON:0000305,3.81e-41,7;UBERON:0004871,4.46e-36,8;UBERON:0004923,4.80e-17,66;UBERON:0000007,3.27e-10,2;UBERON:0000995,1.95e-08,21;UBERON:0005795,4.44e-08,22;UBERON:0003975,4.44e-08,22;UBERON:0000920,2.47e-07,3;UBERON:0004175,3.57e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,1.84636884759917,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24378600024763,4.99306318531491,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,1.78178808499583,0.921482106297696,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0,5.37063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.957003479195758,0,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |||
|TSSclassifier=W | |||
|UniProt=Q8IY22 | |||
|association_with_transcript=187bp_to_uc002fgr.1_5end | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_17_at_CMIP_5end | |||
|id=chr16:81679150..81679182,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.18e-10!3;CL:0002577!1.18e-10!3;CL:0002536!1.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.12e-60;19!CL:0002577;7.23e-55;3!CL:0002536;6.23e-37;2!CL:0002537;3.12e-15;5!CL:0001014;2.37e-10;2!CL:0001016;2.37e-10;2!CL:0002541;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.59e-60,19;CL:0002577,7.24e-55,3;CL:0002536,4.73e-37,2;CL:0002537,3.35e-15,5;CL:0001014,2.49e-10,2;CL:0001016,2.49e-10,2;CL:0002541,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.05e-25!14;UBERON:0000158!1.05e-25!14;UBERON:0000478!1.68e-16!24;UBERON:0003124!4.66e-16!7;UBERON:0001987!4.56e-13!4;UBERON:0004340!4.56e-13!4;UBERON:0001049!1.30e-12!57;UBERON:0005068!1.30e-12!57;UBERON:0006241!1.30e-12!57;UBERON:0007135!1.30e-12!57;UBERON:0000305!1.62e-11!7;UBERON:0001017!1.23e-10!82;UBERON:0004871!5.13e-10!8;UBERON:0003075!5.89e-10!86;UBERON:0007284!5.89e-10!86;UBERON:0005743!6.49e-10!86;UBERON:0002346!2.73e-09!90;UBERON:0002616!3.01e-09!59;UBERON:0000073!1.63e-08!94;UBERON:0001016!1.63e-08!94;UBERON:0000955!2.41e-08!69;UBERON:0006238!2.41e-08!69;UBERON:0002780!2.97e-08!41;UBERON:0001890!2.97e-08!41;UBERON:0006240!2.97e-08!41;UBERON:0004121!3.76e-08!169;UBERON:0003080!5.35e-08!42;UBERON:0000924!8.36e-08!173;UBERON:0006601!8.36e-08!173;UBERON:0001893!3.50e-07!34;UBERON:0000007!3.77e-07!2;UBERON:0001950!5.17e-07!20;UBERON:0007023!5.59e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.27e-47;24!UBERON:0005631;1.06e-44;10!UBERON:0000158;1.06e-44;10!UBERON:0001987;2.20e-41;4!UBERON:0000305;4.01e-41;7!UBERON:0000007;3.27e-10;2!UBERON:0003124;2.55e-07;3!UBERON:0000920;2.55e-07;3!UBERON:0004923;9.72e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.48e-81,14;UBERON:0000158,2.48e-81,14;UBERON:0000478,2.13e-47,24;UBERON:0003124,1.21e-41,7;UBERON:0001987,2.20e-41,4;UBERON:0004340,2.20e-41,4;UBERON:0000305,3.81e-41,7;UBERON:0004871,4.46e-36,8;UBERON:0004923,4.80e-17,66;UBERON:0000007,3.27e-10,2;UBERON:0000995,1.95e-08,21;UBERON:0005795,4.44e-08,22;UBERON:0003975,4.44e-08,22;UBERON:0000920,2.47e-07,3;UBERON:0004175,3.57e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,1.84636884759917,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24378600024763,4.99306318531491,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,1.78178808499583,0.921482106297696,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0,5.37063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.957003479195758,0,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0.227662191351298,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0.594092800654172,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@CMIP | |||
}} |
Revision as of 11:44, 11 September 2013
Short description: | p17@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_CMIP_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | 187bp_to_uc002fgr.1_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.59e-60 | 19 |
placental epithelial cell | 7.24e-55 | 3 |
amniotic epithelial cell | 4.73e-37 | 2 |
amnion mesenchymal stem cell | 3.35e-15 | 5 |
CD1a-positive Langerhans cell | 2.49e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.49e-10 | 2 |
chorionic membrane mesenchymal stem cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.48e-81 | 14 |
membranous layer | 2.48e-81 | 14 |
extraembryonic structure | 2.13e-47 | 24 |
chorion | 1.21e-41 | 7 |
placenta | 2.20e-41 | 4 |
allantois | 2.20e-41 | 4 |
amnion | 3.81e-41 | 7 |
somatic layer of lateral plate mesoderm | 4.46e-36 | 8 |
organ component layer | 4.80e-17 | 66 |
pituitary gland | 3.27e-10 | 2 |
uterus | 1.95e-08 | 21 |
embryonic uterus | 4.44e-08 | 22 |
internal female genitalia | 4.44e-08 | 22 |
egg chorion | 2.47e-07 | 3 |
internal genitalia | 3.57e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.