FFCP PHASE1:Hg19::chr16:30406423..30406447,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=197407|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13114|TSSclassifier=S|UniProt=E9PQ92,Q96MX3|association_with_transcript=0bp_to_ENST00000524644,NM_001214909_5end|description=CAGE_peak_4_at_ZNF48_5end|id=chr16:30406423..30406447,+|ontology_enrichment_celltype=CL:0002139!1.34e-19!24;CL:0000071!8.42e-18!18;CL:0002546!8.42e-18!18;CL:0002321!1.60e-17!248;CL:0000220!1.75e-16!246;CL:0000115!4.44e-16!35;CL:0002078!8.99e-13!44;CL:0002319!1.69e-12!25;CL:0000133!2.72e-12!59;CL:0000222!1.68e-10!119;CL:0000213!1.75e-10!57;CL:0000215!1.75e-10!57;CL:0000047!7.27e-10!8;CL:1000413!1.15e-09!9;CL:0000221!6.63e-09!71;CL:0000540!3.97e-08!6;CL:0000031!3.97e-08!6;CL:0000404!3.97e-08!6;CL:0000128!7.69e-08!7;CL:0000126!7.69e-08!7;CL:0000127!7.69e-08!7;CL:0002453!7.69e-08!7;CL:0002543!5.50e-07!6|ontology_enrichment_celltype_v019=CL:0000071;1.32e-28;18!CL:0000540;1.37e-21;6!CL:0000404;1.37e-21;6!CL:0002139;1.14e-20;24!CL:0002319;9.92e-19;25!CL:0002322;9.20e-17;5!CL:0000115;9.96e-14;36!CL:1000413;6.45e-13;9!CL:0002605;2.47e-11;3!CL:0000064;4.56e-11;3!CL:0000067;4.56e-11;3!CL:0005012;4.56e-11;3!CL:0002304;4.56e-11;3!CL:0002144;3.65e-10;3!CL:0002543;1.44e-09;6!CL:0002078;4.01e-09;45!CL:0000128;5.00e-08;7!CL:0000126;5.00e-08;7!CL:0000127;5.00e-08;7!CL:0000213;1.22e-07;58!CL:0000215;1.22e-07;58!CL:0000047;3.86e-07;2!CL:0000075;7.15e-07;27|ontology_enrichment_celltype_v019_2=CL:0000071,1.74e-28,18;CL:0002546,1.74e-28,18;CL:0000047,6.54e-27,8;CL:0000540,1.34e-21,6;CL:0000031,1.34e-21,6;CL:0000404,1.34e-21,6;CL:0002139,1.39e-20,24;CL:0002319,9.83e-19,25;CL:0000115,5.23e-17,36;CL:0002322,9.10e-17,5;CL:0000133,1.36e-15,59;CL:0002321,2.86e-13,250;CL:1000413,6.83e-13,9;CL:0002078,6.89e-13,45;CL:0000221,5.18e-12,72;CL:0002605,2.84e-11,3;CL:0000064,3.99e-11,3;CL:0000067,3.99e-11,3;CL:0005012,3.99e-11,3;CL:0002304,3.99e-11,3;CL:0000213,1.40e-10,58;CL:0000215,1.40e-10,58;CL:0002144,4.03e-10,3;CL:0002543,1.65e-09,6;CL:0000076,2.81e-08,63;CL:0000128,4.32e-08,7;CL:0000126,4.32e-08,7;CL:0000127,4.32e-08,7;CL:0002453,4.32e-08,7;CL:0000075,6.34e-07,27;CL:0000222,9.69e-07,121|ontology_enrichment_development_v019=CL:0002546;1.32e-28;18!CL:0000031;1.37e-21;6!CL:0000133;2.88e-09;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!8.42e-18!18;UBERON:0004638!8.42e-18!18;UBERON:0004852!8.42e-18!18;UBERON:0000487!9.58e-15!22;UBERON:0002049!1.89e-13!79;UBERON:0007798!1.89e-13!79;UBERON:0006914!2.72e-13!25;UBERON:0000055!9.71e-11!69;UBERON:0004535!3.32e-10!110;UBERON:0001981!9.52e-10!60;UBERON:0007500!9.52e-10!60;UBERON:0004537!9.52e-10!60;UBERON:0006965!9.52e-10!60;UBERON:0003915!1.15e-09!9;UBERON:0004700!1.15e-09!9;UBERON:0001917!1.15e-09!9;UBERON:0001009!1.57e-09!113;UBERON:0003914!3.23e-09!118;UBERON:0000490!2.34e-08!138;UBERON:0000119!8.03e-08!312;UBERON:0007625!1.35e-07!11;UBERON:0000483!1.46e-07!309;UBERON:0004872!1.53e-07!84|ontology_enrichment_uberon_v019=UBERON:0004638;1.32e-28;18!UBERON:0001986;1.32e-28;18!UBERON:0004852;1.32e-28;18!UBERON:0000487;7.81e-23;22!UBERON:0006914;1.01e-19;25!UBERON:0000490;1.59e-18;33!UBERON:0003915;6.45e-13;9!UBERON:0004700;6.45e-13;9!UBERON:0001917;6.45e-13;9!UBERON:0001778;4.56e-11;3!UBERON:0001775;4.56e-11;3!UBERON:0007625;8.56e-11;11!UBERON:0010523;3.65e-10;3!UBERON:0001915;3.65e-10;3!UBERON:0001982;3.65e-10;3!UBERON:0007500;1.00e-08;56!UBERON:0001981;1.00e-08;56!UBERON:0004537;1.00e-08;56!UBERON:0003914;1.82e-08;74!UBERON:0000488;2.14e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.74e-28,18;UBERON:0001986,1.74e-28,18;UBERON:0004852,1.74e-28,18;UBERON:0000487,9.76e-23,22;UBERON:0006914,1.23e-19,25;UBERON:0003915,6.83e-13,9;UBERON:0004700,6.83e-13,9;UBERON:0001917,6.83e-13,9;UBERON:0007500,4.24e-12,59;UBERON:0001981,4.24e-12,59;UBERON:0004537,4.24e-12,59;UBERON:0006965,4.24e-12,59;UBERON:0002049,4.43e-12,78;UBERON:0007798,4.43e-12,78;UBERON:0001778,3.99e-11,3;UBERON:0001775,3.99e-11,3;UBERON:0007625,6.66e-11,11;UBERON:0010523,4.03e-10,3;UBERON:0001915,4.03e-10,3;UBERON:0001982,4.03e-10,3;UBERON:0000055,5.78e-10,68;UBERON:0003914,5.83e-09,117;UBERON:0004872,1.80e-08,83;UBERON:0000488,1.94e-08,4;UBERON:0004535,3.45e-08,109;UBERON:0001009,7.67e-08,112;UBERON:0000025,4.37e-07,192|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,4.21886169616784,3.65155045193687,2.43966399395253,0.984968464614303,0.612002073732759,1.88072832886853,2.28988789704845,6.29622355335267,5.52387614217132,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,4.44313640671119,2.88248216701333,3.16205228495254,0,0,0,0,0,0,0,0,0,1.39133685156694,0.860234595106124,0.694281003215189,2.26123176769604,2.51699661725944,2.476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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=197407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13114 | |||
|TSSclassifier=S | |||
|UniProt=E9PQ92,Q96MX3 | |||
|association_with_transcript=0bp_to_ENST00000524644,NM_001214909_5end | |||
|description=CAGE_peak_4_at_ZNF48_5end | |||
|id=chr16:30406423..30406447,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.34e-19!24;CL:0000071!8.42e-18!18;CL:0002546!8.42e-18!18;CL:0002321!1.60e-17!248;CL:0000220!1.75e-16!246;CL:0000115!4.44e-16!35;CL:0002078!8.99e-13!44;CL:0002319!1.69e-12!25;CL:0000133!2.72e-12!59;CL:0000222!1.68e-10!119;CL:0000213!1.75e-10!57;CL:0000215!1.75e-10!57;CL:0000047!7.27e-10!8;CL:1000413!1.15e-09!9;CL:0000221!6.63e-09!71;CL:0000540!3.97e-08!6;CL:0000031!3.97e-08!6;CL:0000404!3.97e-08!6;CL:0000128!7.69e-08!7;CL:0000126!7.69e-08!7;CL:0000127!7.69e-08!7;CL:0002453!7.69e-08!7;CL:0002543!5.50e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.32e-28;18!CL:0000540;1.37e-21;6!CL:0000404;1.37e-21;6!CL:0002139;1.14e-20;24!CL:0002319;9.92e-19;25!CL:0002322;9.20e-17;5!CL:0000115;9.96e-14;36!CL:1000413;6.45e-13;9!CL:0002605;2.47e-11;3!CL:0000064;4.56e-11;3!CL:0000067;4.56e-11;3!CL:0005012;4.56e-11;3!CL:0002304;4.56e-11;3!CL:0002144;3.65e-10;3!CL:0002543;1.44e-09;6!CL:0002078;4.01e-09;45!CL:0000128;5.00e-08;7!CL:0000126;5.00e-08;7!CL:0000127;5.00e-08;7!CL:0000213;1.22e-07;58!CL:0000215;1.22e-07;58!CL:0000047;3.86e-07;2!CL:0000075;7.15e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.74e-28,18;CL:0002546,1.74e-28,18;CL:0000047,6.54e-27,8;CL:0000540,1.34e-21,6;CL:0000031,1.34e-21,6;CL:0000404,1.34e-21,6;CL:0002139,1.39e-20,24;CL:0002319,9.83e-19,25;CL:0000115,5.23e-17,36;CL:0002322,9.10e-17,5;CL:0000133,1.36e-15,59;CL:0002321,2.86e-13,250;CL:1000413,6.83e-13,9;CL:0002078,6.89e-13,45;CL:0000221,5.18e-12,72;CL:0002605,2.84e-11,3;CL:0000064,3.99e-11,3;CL:0000067,3.99e-11,3;CL:0005012,3.99e-11,3;CL:0002304,3.99e-11,3;CL:0000213,1.40e-10,58;CL:0000215,1.40e-10,58;CL:0002144,4.03e-10,3;CL:0002543,1.65e-09,6;CL:0000076,2.81e-08,63;CL:0000128,4.32e-08,7;CL:0000126,4.32e-08,7;CL:0000127,4.32e-08,7;CL:0002453,4.32e-08,7;CL:0000075,6.34e-07,27;CL:0000222,9.69e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.32e-28;18!CL:0000031;1.37e-21;6!CL:0000133;2.88e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.42e-18!18;UBERON:0004638!8.42e-18!18;UBERON:0004852!8.42e-18!18;UBERON:0000487!9.58e-15!22;UBERON:0002049!1.89e-13!79;UBERON:0007798!1.89e-13!79;UBERON:0006914!2.72e-13!25;UBERON:0000055!9.71e-11!69;UBERON:0004535!3.32e-10!110;UBERON:0001981!9.52e-10!60;UBERON:0007500!9.52e-10!60;UBERON:0004537!9.52e-10!60;UBERON:0006965!9.52e-10!60;UBERON:0003915!1.15e-09!9;UBERON:0004700!1.15e-09!9;UBERON:0001917!1.15e-09!9;UBERON:0001009!1.57e-09!113;UBERON:0003914!3.23e-09!118;UBERON:0000490!2.34e-08!138;UBERON:0000119!8.03e-08!312;UBERON:0007625!1.35e-07!11;UBERON:0000483!1.46e-07!309;UBERON:0004872!1.53e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.32e-28;18!UBERON:0001986;1.32e-28;18!UBERON:0004852;1.32e-28;18!UBERON:0000487;7.81e-23;22!UBERON:0006914;1.01e-19;25!UBERON:0000490;1.59e-18;33!UBERON:0003915;6.45e-13;9!UBERON:0004700;6.45e-13;9!UBERON:0001917;6.45e-13;9!UBERON:0001778;4.56e-11;3!UBERON:0001775;4.56e-11;3!UBERON:0007625;8.56e-11;11!UBERON:0010523;3.65e-10;3!UBERON:0001915;3.65e-10;3!UBERON:0001982;3.65e-10;3!UBERON:0007500;1.00e-08;56!UBERON:0001981;1.00e-08;56!UBERON:0004537;1.00e-08;56!UBERON:0003914;1.82e-08;74!UBERON:0000488;2.14e-08;4 | |||
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| |||
|short_description=p4@ZNF48 | |||
}} |
Revision as of 10:07, 11 September 2013
Short description: | p4@ZNF48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ZNF48_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524644, NM_001214909_5end |
EntrezGene: | ZNF48 |
HGNC: | 13114 |
UniProt: | E9PQ92Q96MX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.74e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.74e-28 | 18 |
neuronal stem cell | 6.54e-27 | 8 |
neuron | 1.34e-21 | 6 |
neuroblast | 1.34e-21 | 6 |
electrically signaling cell | 1.34e-21 | 6 |
endothelial cell of vascular tree | 1.39e-20 | 24 |
neural cell | 9.83e-19 | 25 |
endothelial cell | 5.23e-17 | 36 |
embryonic stem cell | 9.10e-17 | 5 |
neurectodermal cell | 1.36e-15 | 59 |
embryonic cell | 2.86e-13 | 250 |
endothelial cell of artery | 6.83e-13 | 9 |
meso-epithelial cell | 6.89e-13 | 45 |
ectodermal cell | 5.18e-12 | 72 |
astrocyte of the cerebral cortex | 2.84e-11 | 3 |
ciliated cell | 3.99e-11 | 3 |
ciliated epithelial cell | 3.99e-11 | 3 |
multi-ciliated epithelial cell | 3.99e-11 | 3 |
non-pigmented ciliary epithelial cell | 3.99e-11 | 3 |
lining cell | 1.40e-10 | 58 |
barrier cell | 1.40e-10 | 58 |
capillary endothelial cell | 4.03e-10 | 3 |
vein endothelial cell | 1.65e-09 | 6 |
squamous epithelial cell | 2.81e-08 | 63 |
oligodendrocyte | 4.32e-08 | 7 |
macroglial cell | 4.32e-08 | 7 |
astrocyte | 4.32e-08 | 7 |
oligodendrocyte precursor cell | 4.32e-08 | 7 |
columnar/cuboidal epithelial cell | 6.34e-07 | 27 |
mesodermal cell | 9.69e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.74e-28 | 18 |
endothelium | 1.74e-28 | 18 |
cardiovascular system endothelium | 1.74e-28 | 18 |
simple squamous epithelium | 9.76e-23 | 22 |
squamous epithelium | 1.23e-19 | 25 |
endothelial tube | 6.83e-13 | 9 |
arterial system endothelium | 6.83e-13 | 9 |
endothelium of artery | 6.83e-13 | 9 |
epithelial tube open at both ends | 4.24e-12 | 59 |
blood vessel | 4.24e-12 | 59 |
blood vasculature | 4.24e-12 | 59 |
vascular cord | 4.24e-12 | 59 |
vasculature | 4.43e-12 | 78 |
vascular system | 4.43e-12 | 78 |
ciliary epithelium | 3.99e-11 | 3 |
ciliary body | 3.99e-11 | 3 |
pigment epithelium of eye | 6.66e-11 | 11 |
microcirculatory vessel | 4.03e-10 | 3 |
endothelium of capillary | 4.03e-10 | 3 |
capillary | 4.03e-10 | 3 |
vessel | 5.78e-10 | 68 |
epithelial tube | 5.83e-09 | 117 |
splanchnic layer of lateral plate mesoderm | 1.80e-08 | 83 |
atypical epithelium | 1.94e-08 | 4 |
cardiovascular system | 3.45e-08 | 109 |
circulatory system | 7.67e-08 | 112 |
tube | 4.37e-07 | 192 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.