FFCP PHASE1:Hg19::chr15:56208458..56208507,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7727|TSSclassifier=S|UniProt=|association_with_transcript=-147bp_to_AL833300_5end|description=CAGE_peak_15_at_NEDD4_5end|id=chr15:56208458..56208507,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2!CL:0000346;1.47e-09;3!CL:1000428;1.47e-09;3!CL:0002319;6.49e-09;25!CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15|ontology_enrichment_celltype_v019_2=CL:0000346,1.30e-09,3;CL:1000428,1.30e-09,3;CL:0002319,7.33e-09,25;CL:0000133,7.11e-07,59|ontology_enrichment_development_v019=UBERON:0006238;5.79e-10;10!UBERON:0009847;1.10e-09;3!UBERON:0003353;1.10e-09;3!CL:0000339;9.10e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;6.72e-26;1!DOID:3350;1.14e-13;2!DOID:3093;3.27e-09;11|ontology_enrichment_disease_v019_2=DOID:6193,5.93e-26,1;DOID:3350,1.07e-13,2;DOID:3093,3.85e-09,11|ontology_enrichment_uberon=UBERON:0000161!3.73e-07!35;UBERON:0003102!9.65e-07!95|ontology_enrichment_uberon_v019=UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0000412;1.47e-09;3!UBERON:0001992;1.47e-09;3!UBERON:0001134;3.39e-07;16!UBERON:0002036;3.39e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.58e-26,1;UBERON:0001389,3.58e-26,1;UBERON:0000026,3.58e-26,1;UBERON:0008784,3.58e-26,1;UBERON:0006058,3.58e-26,1;UBERON:0003663,3.58e-26,1;UBERON:0004256,3.58e-26,1;UBERON:0004708,3.58e-26,1;UBERON:0002101,3.58e-26,1;UBERON:0004709,3.58e-26,1;UBERON:0002529,3.58e-26,1;UBERON:0010538,3.58e-26,1;UBERON:0003661,3.58e-26,1;UBERON:0010890,3.58e-26,1;UBERON:0002471,3.58e-26,1;UBERON:0001383,3.58e-26,1;UBERON:0004357,3.58e-26,1;UBERON:0004347,3.58e-26,1;UBERON:0005420,3.58e-26,1;UBERON:0005732,3.58e-26,1;UBERON:0010758,3.58e-26,1;UBERON:0010707,3.58e-26,1;UBERON:0000978,3.58e-26,1;UBERON:0002103,3.58e-26,1;UBERON:0001665,3.58e-26,1;UBERON:0003823,3.58e-26,1;UBERON:0000154,3.58e-26,1;UBERON:0010709,3.58e-26,1;UBERON:0005733,3.58e-26,1;UBERON:0005730,3.58e-26,1;UBERON:0005090,8.28e-14,2;UBERON:0001630,8.28e-14,2;UBERON:0000412,1.30e-09,3;UBERON:0001992,1.30e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,1.02268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,1.37588825977293,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0.101998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,2.12748913591143,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,1.94228651156368,3.2852098193999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0|short_description=p15@NEDD4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-147bp_to_AL833300_5end | |||
|description=CAGE_peak_15_at_NEDD4_5end | |||
|id=chr15:56208458..56208507,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2!CL:0000346;1.47e-09;3!CL:1000428;1.47e-09;3!CL:0002319;6.49e-09;25!CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.30e-09,3;CL:1000428,1.30e-09,3;CL:0002319,7.33e-09,25;CL:0000133,7.11e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.79e-10;10!UBERON:0009847;1.10e-09;3!UBERON:0003353;1.10e-09;3!CL:0000339;9.10e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;6.72e-26;1!DOID:3350;1.14e-13;2!DOID:3093;3.27e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.93e-26,1;DOID:3350,1.07e-13,2;DOID:3093,3.85e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000161!3.73e-07!35;UBERON:0003102!9.65e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0000412;1.47e-09;3!UBERON:0001992;1.47e-09;3!UBERON:0001134;3.39e-07;16!UBERON:0002036;3.39e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.58e-26,1;UBERON:0001389,3.58e-26,1;UBERON:0000026,3.58e-26,1;UBERON:0008784,3.58e-26,1;UBERON:0006058,3.58e-26,1;UBERON:0003663,3.58e-26,1;UBERON:0004256,3.58e-26,1;UBERON:0004708,3.58e-26,1;UBERON:0002101,3.58e-26,1;UBERON:0004709,3.58e-26,1;UBERON:0002529,3.58e-26,1;UBERON:0010538,3.58e-26,1;UBERON:0003661,3.58e-26,1;UBERON:0010890,3.58e-26,1;UBERON:0002471,3.58e-26,1;UBERON:0001383,3.58e-26,1;UBERON:0004357,3.58e-26,1;UBERON:0004347,3.58e-26,1;UBERON:0005420,3.58e-26,1;UBERON:0005732,3.58e-26,1;UBERON:0010758,3.58e-26,1;UBERON:0010707,3.58e-26,1;UBERON:0000978,3.58e-26,1;UBERON:0002103,3.58e-26,1;UBERON:0001665,3.58e-26,1;UBERON:0003823,3.58e-26,1;UBERON:0000154,3.58e-26,1;UBERON:0010709,3.58e-26,1;UBERON:0005733,3.58e-26,1;UBERON:0005730,3.58e-26,1;UBERON:0005090,8.28e-14,2;UBERON:0001630,8.28e-14,2;UBERON:0000412,1.30e-09,3;UBERON:0001992,1.30e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,1.02268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,1.37588825977293,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0.101998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,2.12748913591143,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,1.94228651156368,3.2852098193999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p15@NEDD4 | |||
}} |
Revision as of 07:31, 11 September 2013
Short description: | p15@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_AL833300_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.30e-09 | 3 |
stem cell of epidermis | 1.30e-09 | 3 |
neural cell | 7.33e-09 | 25 |
neurectodermal cell | 7.11e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.58e-26 | 1 |
soleus muscle | 3.58e-26 | 1 |
appendage | 3.58e-26 | 1 |
lower limb segment | 3.58e-26 | 1 |
multi-limb segment region | 3.58e-26 | 1 |
hindlimb muscle | 3.58e-26 | 1 |
hindlimb zeugopod muscle | 3.58e-26 | 1 |
paired limb/fin | 3.58e-26 | 1 |
limb | 3.58e-26 | 1 |
pelvic appendage | 3.58e-26 | 1 |
limb segment | 3.58e-26 | 1 |
paired limb/fin segment | 3.58e-26 | 1 |
limb muscle | 3.58e-26 | 1 |
pelvic complex muscle | 3.58e-26 | 1 |
zeugopod | 3.58e-26 | 1 |
muscle of leg | 3.58e-26 | 1 |
paired limb/fin bud | 3.58e-26 | 1 |
limb bud | 3.58e-26 | 1 |
pelvic appendage bud | 3.58e-26 | 1 |
limb/fin field | 3.58e-26 | 1 |
subdivision of organism along appendicular axis | 3.58e-26 | 1 |
appendage girdle complex | 3.58e-26 | 1 |
leg | 3.58e-26 | 1 |
hindlimb | 3.58e-26 | 1 |
triceps surae | 3.58e-26 | 1 |
hindlimb zeugopod | 3.58e-26 | 1 |
posterior region of body | 3.58e-26 | 1 |
pelvic complex | 3.58e-26 | 1 |
limb field | 3.58e-26 | 1 |
hindlimb/pelvic fin field | 3.58e-26 | 1 |
muscle structure | 8.28e-14 | 2 |
muscle organ | 8.28e-14 | 2 |
dermal papilla | 1.30e-09 | 3 |
papillary layer of dermis | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.93e-26 | 1 |
mesenchymal cell neoplasm | 1.07e-13 | 2 |
nervous system cancer | 3.85e-09 | 11 |
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