FFCP PHASE1:Hg19::chr14:72053008..72053023,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26037|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20284|TSSclassifier=S|UniProt=O43166|association_with_transcript=10bp_to_ENST00000358550,uc001xmu.2_5end|description=CAGE_peak_6_at_SIPA1L1_5end|id=chr14:72053008..72053023,+|ontology_enrichment_celltype=CL:0000055!1.37e-11!180;CL:0000057!1.60e-10!75;CL:0002620!7.25e-08!23|ontology_enrichment_celltype_v019=CL:0002620;2.20e-11;23!CL:0000138;1.03e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,1.78e-11,23;CL:0000057,1.02e-10,76;CL:0000058,1.05e-07,6;CL:0000138,1.05e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.54e-30!57;UBERON:0005068!7.54e-30!57;UBERON:0006241!7.54e-30!57;UBERON:0007135!7.54e-30!57;UBERON:0002616!2.64e-28!59;UBERON:0002780!8.82e-28!41;UBERON:0001890!8.82e-28!41;UBERON:0006240!8.82e-28!41;UBERON:0001017!4.15e-27!82;UBERON:0001893!4.83e-27!34;UBERON:0003080!9.49e-27!42;UBERON:0002020!1.52e-26!34;UBERON:0003528!1.52e-26!34;UBERON:0001869!2.89e-26!32;UBERON:0002791!4.11e-26!33;UBERON:0005743!5.46e-26!86;UBERON:0000955!7.50e-26!69;UBERON:0006238!7.50e-26!69;UBERON:0000073!2.70e-24!94;UBERON:0001016!2.70e-24!94;UBERON:0003075!1.63e-21!86;UBERON:0007284!1.63e-21!86;UBERON:0002346!2.37e-20!90;UBERON:0000956!6.46e-20!25;UBERON:0000203!6.46e-20!25;UBERON:0002619!1.41e-19!22;UBERON:0001950!6.24e-18!20;UBERON:0003056!1.56e-17!61;UBERON:0007023!5.72e-17!115;UBERON:0000475!2.80e-15!365;UBERON:0000153!9.12e-15!129;UBERON:0007811!9.12e-15!129;UBERON:0000033!2.96e-14!123;UBERON:0004121!3.35e-12!169;UBERON:0000924!8.46e-12!173;UBERON:0006601!8.46e-12!173;UBERON:0000025!4.57e-10!194;UBERON:0002420!3.15e-09!9;UBERON:0007245!3.15e-09!9;UBERON:0010009!3.15e-09!9;UBERON:0010011!3.15e-09!9;UBERON:0000454!3.15e-09!9;UBERON:0000477!2.45e-08!286;UBERON:0002308!4.75e-08!9;UBERON:0000125!4.75e-08!9;UBERON:0000483!1.26e-07!309;UBERON:0004111!1.33e-07!241;UBERON:0000119!2.70e-07!312;UBERON:0009663!3.11e-07!7;UBERON:0000200!3.46e-07!6;UBERON:0000468!6.04e-07!659|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-34;32!UBERON:0002619;2.71e-32;22!UBERON:0002791;6.42e-32;32!UBERON:0001893;5.63e-31;34!UBERON:0001950;1.52e-29;20!UBERON:0003528;5.86e-29;34!UBERON:0002020;5.86e-29;34!UBERON:0000956;1.06e-27;25!UBERON:0000203;1.06e-27;25!UBERON:0002780;1.69e-26;41!UBERON:0001890;1.69e-26;41!UBERON:0000073;1.00e-17;53!UBERON:0002616;1.00e-17;53!UBERON:0000955;1.15e-13;68!UBERON:0001017;8.01e-13;75!UBERON:0002420;2.35e-12;9!UBERON:0007245;2.35e-12;9!UBERON:0010009;2.35e-12;9!UBERON:0010011;2.35e-12;9!UBERON:0000454;2.35e-12;9!UBERON:0001016;3.63e-11;83!UBERON:0000200;4.46e-11;6!UBERON:0000349;2.59e-09;5!UBERON:0001871;3.24e-09;6!UBERON:0009663;4.24e-09;7!UBERON:0001872;5.35e-09;5!UBERON:0000369;2.30e-08;4!UBERON:0002435;2.30e-08;4!UBERON:0000204;2.30e-08;4!UBERON:0002021;3.07e-08;5!UBERON:0000125;7.66e-07;9!UBERON:0002308;7.66e-07;9!UBERON:0005383;9.64e-07;3!UBERON:0005382;9.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.74e-38,32;UBERON:0002780,2.95e-36,41;UBERON:0001890,2.95e-36,41;UBERON:0003080,2.95e-36,41;UBERON:0006240,2.95e-36,41;UBERON:0001893,1.61e-35,34;UBERON:0002791,2.48e-35,32;UBERON:0003528,9.33e-33,34;UBERON:0002020,9.33e-33,34;UBERON:0002619,2.34e-32,22;UBERON:0000073,3.22e-31,53;UBERON:0002616,3.22e-31,53;UBERON:0001950,1.42e-29,20;UBERON:0001049,6.03e-29,56;UBERON:0005068,6.03e-29,56;UBERON:0006241,6.03e-29,56;UBERON:0007135,6.03e-29,56;UBERON:0000956,9.32e-28,25;UBERON:0000203,9.32e-28,25;UBERON:0000955,6.49e-26,68;UBERON:0006238,6.49e-26,68;UBERON:0001017,2.34e-25,81;UBERON:0003056,6.78e-24,61;UBERON:0001016,6.45e-23,89;UBERON:0003075,1.68e-18,82;UBERON:0007284,1.68e-18,82;UBERON:0002346,4.02e-17,86;UBERON:0010371,5.65e-14,104;UBERON:0010314,1.65e-13,132;UBERON:0007023,3.45e-13,114;UBERON:0002420,2.95e-12,9;UBERON:0007245,2.95e-12,9;UBERON:0010009,2.95e-12,9;UBERON:0010011,2.95e-12,9;UBERON:0000454,2.95e-12,9;UBERON:0000200,4.90e-11,6;UBERON:0004121,5.44e-11,171;UBERON:0000924,5.44e-11,171;UBERON:0006601,5.44e-11,171;UBERON:0000349,2.24e-09,5;UBERON:0001871,3.31e-09,6;UBERON:0001872,5.30e-09,5;UBERON:0009663,5.43e-09,7;UBERON:0000369,2.31e-08,4;UBERON:0002435,2.31e-08,4;UBERON:0000204,2.31e-08,4;UBERON:0010082,2.31e-08,4;UBERON:0002021,2.92e-08,5;UBERON:0002097,1.56e-07,41;UBERON:0000125,9.21e-07,9;UBERON:0002308,9.21e-07,9;UBERON:0005383,9.95e-07,3;UBERON:0005382,9.95e-07,3|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,1.36142988256051,0.994192127183747,0,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.421587285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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20284 | |||
|TSSclassifier=S | |||
|UniProt=O43166 | |||
|association_with_transcript=10bp_to_ENST00000358550,uc001xmu.2_5end | |||
|description=CAGE_peak_6_at_SIPA1L1_5end | |||
|id=chr14:72053008..72053023,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-11!180;CL:0000057!1.60e-10!75;CL:0002620!7.25e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.20e-11;23!CL:0000138;1.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.78e-11,23;CL:0000057,1.02e-10,76;CL:0000058,1.05e-07,6;CL:0000138,1.05e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.54e-30!57;UBERON:0005068!7.54e-30!57;UBERON:0006241!7.54e-30!57;UBERON:0007135!7.54e-30!57;UBERON:0002616!2.64e-28!59;UBERON:0002780!8.82e-28!41;UBERON:0001890!8.82e-28!41;UBERON:0006240!8.82e-28!41;UBERON:0001017!4.15e-27!82;UBERON:0001893!4.83e-27!34;UBERON:0003080!9.49e-27!42;UBERON:0002020!1.52e-26!34;UBERON:0003528!1.52e-26!34;UBERON:0001869!2.89e-26!32;UBERON:0002791!4.11e-26!33;UBERON:0005743!5.46e-26!86;UBERON:0000955!7.50e-26!69;UBERON:0006238!7.50e-26!69;UBERON:0000073!2.70e-24!94;UBERON:0001016!2.70e-24!94;UBERON:0003075!1.63e-21!86;UBERON:0007284!1.63e-21!86;UBERON:0002346!2.37e-20!90;UBERON:0000956!6.46e-20!25;UBERON:0000203!6.46e-20!25;UBERON:0002619!1.41e-19!22;UBERON:0001950!6.24e-18!20;UBERON:0003056!1.56e-17!61;UBERON:0007023!5.72e-17!115;UBERON:0000475!2.80e-15!365;UBERON:0000153!9.12e-15!129;UBERON:0007811!9.12e-15!129;UBERON:0000033!2.96e-14!123;UBERON:0004121!3.35e-12!169;UBERON:0000924!8.46e-12!173;UBERON:0006601!8.46e-12!173;UBERON:0000025!4.57e-10!194;UBERON:0002420!3.15e-09!9;UBERON:0007245!3.15e-09!9;UBERON:0010009!3.15e-09!9;UBERON:0010011!3.15e-09!9;UBERON:0000454!3.15e-09!9;UBERON:0000477!2.45e-08!286;UBERON:0002308!4.75e-08!9;UBERON:0000125!4.75e-08!9;UBERON:0000483!1.26e-07!309;UBERON:0004111!1.33e-07!241;UBERON:0000119!2.70e-07!312;UBERON:0009663!3.11e-07!7;UBERON:0000200!3.46e-07!6;UBERON:0000468!6.04e-07!659 | |||
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| |||
|short_description=p6@SIPA1L1 | |||
}} |
Revision as of 05:25, 11 September 2013
Short description: | p6@SIPA1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SIPA1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000358550, uc001xmu.2_5end |
EntrezGene: | SIPA1L1 |
HGNC: | 20284 |
UniProt: | O43166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.78e-11 | 23 |
fibroblast | 1.02e-10 | 76 |
chondroblast | 1.05e-07 | 6 |
chondrocyte | 1.05e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.