FFCP PHASE1:Hg19::chr14:55554335..55554340,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:55554335..55554340,-|id=chr14:55554335..55554340,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002363;2.37e-15;2!CL:0002521;8.17e-11;3!CL:0002564;8.17e-11;3|ontology_enrichment_celltype_v019_2=CL:0002363,2.74e-15,2;CL:0000008,2.74e-15,2;CL:0002521,7.42e-11,3;CL:0002564,8.99e-11,3|ontology_enrichment_development_v019=CL:0000008;2.37e-15;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003566;2.37e-15;2!UBERON:0001777;2.37e-15;2!UBERON:0002190;8.17e-11;3!UBERON:0002242;8.17e-11;3!UBERON:0003891;2.43e-08;4!UBERON:0000964;2.43e-08;4!UBERON:0010409;2.43e-08;4!UBERON:0011135;5.38e-07;5!UBERON:0002216;5.38e-07;5!UBERON:0011134;5.38e-07;5!UBERON:0002209;5.38e-07;5!UBERON:0002213;5.38e-07;5!UBERON:0007844;5.38e-07;5!UBERON:0002072;5.38e-07;5!UBERON:0011138;5.38e-07;5!UBERON:0001130;5.38e-07;5!UBERON:0001066;5.38e-07;5!UBERON:0001468;5.38e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003566,2.74e-15,2;UBERON:0001777,2.74e-15,2;UBERON:0002190,7.42e-11,3;UBERON:0002242,8.99e-11,3;UBERON:0003068,8.99e-11,3;UBERON:0002328,8.99e-11,3;UBERON:0004880,8.99e-11,3;UBERON:0003891,2.61e-08,4;UBERON:0000964,2.61e-08,4;UBERON:0010409,2.61e-08,4;UBERON:0004348,2.61e-08,4;UBERON:0005427,2.61e-08,4;UBERON:0002072,5.08e-07,5;UBERON:0011135,5.70e-07,5;UBERON:0002216,5.70e-07,5;UBERON:0011134,5.70e-07,5;UBERON:0002209,5.70e-07,5;UBERON:0002213,5.70e-07,5;UBERON:0005856,5.70e-07,5;UBERON:0005866,5.70e-07,5;UBERON:0005863,5.70e-07,5;UBERON:0007844,5.70e-07,5;UBERON:0011138,5.70e-07,5;UBERON:0001130,5.70e-07,5;UBERON:0001066,5.70e-07,5;UBERON:0001468,5.70e-07,5|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,6.92863541998213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,2.00068208423871,0,0,0,0.157702415033935,0,0,0,2.0694614258501,0,0,0,0,0.686286847621712,0,0.647142602455851,0.213455115606889,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0,0.290033387828457,0.0852266274161009,0,0,0,0.127612712494584,0.30347334256665,0,1.25924938732256,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.80719882876419,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0.514784993585894,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.337017719270924,0,0,0,0,0,0.550157746388935,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0.339936274560377,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0.499921631848426,0.151649117541648,0,0.470531639396343,0,0.144921028610825,0.149254802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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:55554335..55554340,- | |||
|id=chr14:55554335..55554340,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;2.37e-15;2!CL:0002521;8.17e-11;3!CL:0002564;8.17e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,2.74e-15,2;CL:0000008,2.74e-15,2;CL:0002521,7.42e-11,3;CL:0002564,8.99e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000008;2.37e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;2.37e-15;2!UBERON:0001777;2.37e-15;2!UBERON:0002190;8.17e-11;3!UBERON:0002242;8.17e-11;3!UBERON:0003891;2.43e-08;4!UBERON:0000964;2.43e-08;4!UBERON:0010409;2.43e-08;4!UBERON:0011135;5.38e-07;5!UBERON:0002216;5.38e-07;5!UBERON:0011134;5.38e-07;5!UBERON:0002209;5.38e-07;5!UBERON:0002213;5.38e-07;5!UBERON:0007844;5.38e-07;5!UBERON:0002072;5.38e-07;5!UBERON:0011138;5.38e-07;5!UBERON:0001130;5.38e-07;5!UBERON:0001066;5.38e-07;5!UBERON:0001468;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,2.74e-15,2;UBERON:0001777,2.74e-15,2;UBERON:0002190,7.42e-11,3;UBERON:0002242,8.99e-11,3;UBERON:0003068,8.99e-11,3;UBERON:0002328,8.99e-11,3;UBERON:0004880,8.99e-11,3;UBERON:0003891,2.61e-08,4;UBERON:0000964,2.61e-08,4;UBERON:0010409,2.61e-08,4;UBERON:0004348,2.61e-08,4;UBERON:0005427,2.61e-08,4;UBERON:0002072,5.08e-07,5;UBERON:0011135,5.70e-07,5;UBERON:0002216,5.70e-07,5;UBERON:0011134,5.70e-07,5;UBERON:0002209,5.70e-07,5;UBERON:0002213,5.70e-07,5;UBERON:0005856,5.70e-07,5;UBERON:0005866,5.70e-07,5;UBERON:0005863,5.70e-07,5;UBERON:0007844,5.70e-07,5;UBERON:0011138,5.70e-07,5;UBERON:0001130,5.70e-07,5;UBERON:0001066,5.70e-07,5;UBERON:0001468,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,6.92863541998213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,2.00068208423871,0,0,0,0.157702415033935,0,0,0,2.0694614258501,0,0,0,0,0.686286847621712,0,0.647142602455851,0.213455115606889,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0,0.290033387828457,0.0852266274161009,0,0,0,0.127612712494584,0.30347334256665,0,1.25924938732256,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.80719882876419,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0.514784993585894,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.337017719270924,0,0,0,0,0,0.550157746388935,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0.339936274560377,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0.499921631848426,0.151649117541648,0,0.470531639396343,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0.911579868532147,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0.447421727191169,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr14:55554335..55554340,- | |||
}} |
Revision as of 04:49, 11 September 2013
Short description: | p@chr14:55554335..55554340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55554335..55554340, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 2.74e-15 | 2 |
migratory cranial neural crest cell | 2.74e-15 | 2 |
subcutaneous fat cell | 7.42e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 2.74e-15 | 2 |
substantia propria of cornea | 2.74e-15 | 2 |
subcutaneous adipose tissue | 7.42e-11 | 3 |
nucleus pulposus | 8.99e-11 | 3 |
axial mesoderm | 8.99e-11 | 3 |
notochord | 8.99e-11 | 3 |
chordamesoderm | 8.99e-11 | 3 |
stroma | 2.61e-08 | 4 |
cornea | 2.61e-08 | 4 |
eye surface | 2.61e-08 | 4 |
optic eminence | 2.61e-08 | 4 |
corneal primordium | 2.61e-08 | 4 |
hypodermis | 5.08e-07 | 5 |
intervertebral cartilage | 5.70e-07 | 5 |
symphysis | 5.70e-07 | 5 |
nonsynovial joint | 5.70e-07 | 5 |
fibrous joint | 5.70e-07 | 5 |
cartilaginous joint | 5.70e-07 | 5 |
developing mesenchymal condensation | 5.70e-07 | 5 |
pre-cartilage condensation | 5.70e-07 | 5 |
cartilaginous condensation | 5.70e-07 | 5 |
cartilage element | 5.70e-07 | 5 |
post-cranial axial skeletal system | 5.70e-07 | 5 |
vertebral column | 5.70e-07 | 5 |
intervertebral disk | 5.70e-07 | 5 |
intervertebral joint | 5.70e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.