FFCP PHASE1:Hg19::chr13:58205562..58205573,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27253|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14267|TSSclassifier=S|UniProt=O14917|association_with_transcript=-215bp_to_NM_001040429,uc001vhq.1,uc010aec.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_6_at_PCDH17_5end|id=chr13:58205562..58205573,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;3.22e-15;3!UBERON:0006241;7.01e-15;3!UBERON:0003057;7.01e-15;3!UBERON:0005425;8.62e-12;1!UBERON:0006601;4.91e-09;82!UBERON:0010122;9.95e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.41e-75!57;UBERON:0005068!1.41e-75!57;UBERON:0006241!1.41e-75!57;UBERON:0007135!1.41e-75!57;UBERON:0002616!9.60e-62!59;UBERON:0000955!4.75e-59!69;UBERON:0006238!4.75e-59!69;UBERON:0000073!6.28e-59!94;UBERON:0001016!6.28e-59!94;UBERON:0001017!3.52e-56!82;UBERON:0005743!1.74e-55!86;UBERON:0002346!4.69e-53!90;UBERON:0003075!6.42e-51!86;UBERON:0007284!6.42e-51!86;UBERON:0002780!3.45e-50!41;UBERON:0001890!3.45e-50!41;UBERON:0006240!3.45e-50!41;UBERON:0003080!8.26e-49!42;UBERON:0007023!4.80e-47!115;UBERON:0001893!1.75e-45!34;UBERON:0002020!2.72e-45!34;UBERON:0003528!2.72e-45!34;UBERON:0002791!3.54e-43!33;UBERON:0001869!1.11e-40!32;UBERON:0003056!2.73e-33!61;UBERON:0000924!8.95e-32!173;UBERON:0006601!8.95e-32!173;UBERON:0000033!1.78e-31!123;UBERON:0004121!6.75e-30!169;UBERON:0002619!1.75e-29!22;UBERON:0000153!1.85e-29!129;UBERON:0007811!1.85e-29!129;UBERON:0001950!9.70e-29!20;UBERON:0000956!1.53e-28!25;UBERON:0000203!1.53e-28!25;UBERON:0003076!1.40e-27!15;UBERON:0003057!1.40e-27!15;UBERON:0004732!5.93e-23!13;UBERON:0004733!1.75e-20!12;UBERON:0002028!1.75e-20!12;UBERON:0007277!1.75e-20!12;UBERON:0000025!5.78e-19!194;UBERON:0002308!7.30e-19!9;UBERON:0000125!7.30e-19!9;UBERON:0002298!9.18e-16!8;UBERON:0002420!1.19e-14!9;UBERON:0007245!1.19e-14!9;UBERON:0010009!1.19e-14!9;UBERON:0010011!1.19e-14!9;UBERON:0000454!1.19e-14!9;UBERON:0009663!4.04e-14!7;UBERON:0000064!4.96e-14!219;UBERON:0002680!5.03e-14!9;UBERON:0001895!5.03e-14!9;UBERON:0010092!5.03e-14!9;UBERON:0004111!1.26e-13!241;UBERON:0001872!2.01e-13!5;UBERON:0000477!3.40e-13!286;UBERON:0000200!7.55e-11!6;UBERON:0000483!2.09e-10!309;UBERON:0000475!2.23e-10!365;UBERON:0000119!3.49e-10!312;UBERON:0006331!4.83e-09!3;UBERON:0000988!5.37e-09!3;UBERON:0002240!5.51e-09!3;UBERON:0002021!1.22e-08!5;UBERON:0000062!1.31e-08!511;UBERON:0002771!1.92e-08!3;UBERON:0001896!2.30e-08!3;UBERON:0005290!2.30e-08!3;UBERON:0010096!2.30e-08!3;UBERON:0001871!3.33e-08!7;UBERON:0000481!1.39e-07!347;UBERON:0002037!2.27e-07!6;UBERON:0006215!2.27e-07!6;UBERON:0001897!5.95e-07!2;UBERON:0005162!6.65e-07!2;UBERON:0000122!6.65e-07!2;UBERON:0000369!6.75e-07!4;UBERON:0002435!6.75e-07!4;UBERON:0000204!6.75e-07!4;UBERON:0010082!6.75e-07!4;UBERON:0000922!6.82e-07!612|ontology_enrichment_uberon_v019=UBERON:0002420;4.85e-29;9!UBERON:0000125;4.85e-29;9!UBERON:0007245;4.85e-29;9!UBERON:0002308;4.85e-29;9!UBERON:0010009;4.85e-29;9!UBERON:0010011;4.85e-29;9!UBERON:0000454;4.85e-29;9!UBERON:0000073;1.14e-27;53!UBERON:0002616;1.14e-27;53!UBERON:0002780;9.69e-25;41!UBERON:0001890;9.69e-25;41!UBERON:0009663;2.77e-24;7!UBERON:0001897;3.16e-22;2!UBERON:0005162;3.16e-22;2!UBERON:0000122;3.16e-22;2!UBERON:0010225;3.16e-22;2!UBERON:0003528;1.36e-20;34!UBERON:0002020;1.36e-20;34!UBERON:0001016;2.25e-20;83!UBERON:0004732;3.77e-20;13!UBERON:0001893;3.33e-19;34!UBERON:0002680;5.30e-19;9!UBERON:0001895;5.30e-19;9!UBERON:0002791;5.42e-18;32!UBERON:0001017;3.40e-16;75!UBERON:0000988;7.01e-15;3!UBERON:0002240;7.01e-15;3!UBERON:0005174;7.01e-15;3!UBERON:0001137;7.01e-15;3!UBERON:0004733;2.54e-14;12!UBERON:0002028;2.54e-14;12!UBERON:0001869;1.51e-13;32!UBERON:0000955;8.70e-13;68!UBERON:0002336;3.26e-12;1!UBERON:0011215;3.26e-12;1!UBERON:0001018;3.26e-12;1!UBERON:0002473;3.26e-12;1!UBERON:0005340;3.26e-12;1!UBERON:0003544;3.26e-12;1!UBERON:0005970;3.26e-12;1!UBERON:0002316;3.26e-12;1!UBERON:0001020;3.26e-12;1!UBERON:0002437;3.26e-12;1!UBERON:0001882;8.62e-12;1!UBERON:0002038;8.62e-12;1!UBERON:0000941;8.62e-12;1!UBERON:0001785;8.62e-12;1!UBERON:0002464;8.62e-12;1!UBERON:0004904;8.62e-12;1!UBERON:0001021;8.62e-12;1!UBERON:0009661;8.62e-12;1!UBERON:0002950;8.62e-12;1!UBERON:0005403;8.62e-12;1!UBERON:0001891;8.62e-12;1!UBERON:0000369;1.32e-11;4!UBERON:0002435;1.32e-11;4!UBERON:0002784;1.32e-11;4!UBERON:0000204;1.32e-11;4!UBERON:0007023;4.39e-11;114!UBERON:0001872;2.68e-09;5!UBERON:0000349;2.68e-09;5!UBERON:0001950;3.52e-08;20!UBERON:0002037;4.65e-08;6!UBERON:0002298;6.83e-08;6!UBERON:0002619;1.75e-07;22!UBERON:0011216;5.26e-07;132!UBERON:0001894;5.34e-07;7!UBERON:0001873;9.95e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.23e-50,56;UBERON:0005068,1.23e-50,56;UBERON:0006241,1.23e-50,56;UBERON:0007135,1.23e-50,56;UBERON:0000073,1.93e-41,53;UBERON:0002616,1.93e-41,53;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14267 | |||
|TSSclassifier=S | |||
|UniProt=O14917 | |||
|association_with_transcript=-215bp_to_NM_001040429,uc001vhq.1,uc010aec.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_PCDH17_5end | |||
|id=chr13:58205562..58205573,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.22e-15;3!UBERON:0006241;7.01e-15;3!UBERON:0003057;7.01e-15;3!UBERON:0005425;8.62e-12;1!UBERON:0006601;4.91e-09;82!UBERON:0010122;9.95e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@PCDH17 | |||
}} |
Revision as of 02:38, 11 September 2013
Short description: | p6@PCDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PCDH17_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -215bp_to_NM_001040429, uc001vhq.1, uc010aec.1_5end |
EntrezGene: | PCDH17 |
HGNC: | 14267 |
UniProt: | O14917 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.