FFCP PHASE1:Hg19::chr13:30169584..30169658,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11057 | |||
|TSSclassifier=S | |||
|UniProt=P30825 | |||
|association_with_transcript=62bp_to_ENST00000380752_5end | |||
|description=CAGE_peak_3_at_SLC7A1_5end | |||
|id=chr13:30169584..30169658,- | |||
|ontology_enrichment_celltype=CL:0000548!6.27e-26!679;CL:0000004!6.27e-26!679;CL:0000255!6.27e-26!679;CL:0000012!1.69e-25!682;CL:0002371!8.11e-20!591;CL:0000055!5.00e-19!180;CL:0000144!3.81e-18!625;CL:0000003!2.05e-15!722;CL:0000057!9.53e-15!75;CL:0000063!5.85e-14!578;CL:0000220!1.71e-10!246;CL:0002321!6.23e-10!248;CL:0000066!6.99e-10!254;CL:0002620!1.43e-08!23;CL:0000222!1.03e-07!119;CL:0000183!6.88e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.33e-15,76;CL:0002321,3.95e-10,250;CL:0000066,9.15e-10,253;CL:0002620,1.42e-08,23;CL:0000222,6.84e-08,121;CL:0000680,9.93e-07,58;CL:0000056,9.93e-07,58;CL:0000355,9.93e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.85e-12!95;UBERON:0002097!4.62e-10!40;UBERON:0000486!1.55e-09!82;UBERON:0002199!5.15e-09!45;UBERON:0002416!5.15e-09!45;UBERON:0002049!7.28e-09!79;UBERON:0007798!7.28e-09!79;UBERON:0004923!1.01e-08!57;UBERON:0000055!1.25e-08!69;UBERON:0001637!2.48e-08!42;UBERON:0003509!2.48e-08!42;UBERON:0004572!2.48e-08!42;UBERON:0000914!3.85e-08!83;UBERON:0002329!3.85e-08!83;UBERON:0003077!3.85e-08!83;UBERON:0003059!3.85e-08!83;UBERON:0007282!3.85e-08!83;UBERON:0009618!3.85e-08!83;UBERON:0007285!3.85e-08!83;UBERON:0001981!7.46e-08!60;UBERON:0007500!7.46e-08!60;UBERON:0004537!7.46e-08!60;UBERON:0006965!7.46e-08!60;UBERON:0004290!1.55e-07!70;UBERON:0002100!2.22e-07!216;UBERON:0005256!2.80e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.01e-07;41!UBERON:0004923;4.48e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.81e-12,99;UBERON:0000486,1.09e-09,83;UBERON:0002097,1.88e-09,41;UBERON:0004923,2.71e-09,66;UBERON:0002049,7.82e-09,78;UBERON:0007798,7.82e-09,78;UBERON:0000055,1.33e-08,68;UBERON:0002199,1.69e-08,46;UBERON:0002416,1.69e-08,46;UBERON:0001637,2.46e-08,42;UBERON:0003509,2.46e-08,42;UBERON:0004572,2.46e-08,42;UBERON:0007500,7.87e-08,59;UBERON:0001981,7.87e-08,59;UBERON:0004537,7.87e-08,59;UBERON:0006965,7.87e-08,59;UBERON:0007503,9.82e-08,78;UBERON:0002329,1.11e-07,71;UBERON:0003059,1.11e-07,71;UBERON:0007282,1.11e-07,71;UBERON:0004290,1.11e-07,71;UBERON:0009618,1.11e-07,71;UBERON:0000490,1.91e-07,148;UBERON:0003077,2.57e-07,72;UBERON:0007285,2.57e-07,72;UBERON:0007524,2.84e-07,73;UBERON:0002100,3.93e-07,199 | |||
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| |||
|short_description=p3@SLC7A1 | |||
}} |
Revision as of 01:57, 11 September 2013
Short description: | p3@SLC7A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC7A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000380752_5end |
EntrezGene: | SLC7A1 |
HGNC: | 11057 |
UniProt: | P30825 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.33e-15 | 76 |
embryonic cell | 3.95e-10 | 250 |
epithelial cell | 9.15e-10 | 253 |
skin fibroblast | 1.42e-08 | 23 |
mesodermal cell | 6.84e-08 | 121 |
muscle precursor cell | 9.93e-07 | 58 |
myoblast | 9.93e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.93e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.81e-12 | 99 |
multilaminar epithelium | 1.09e-09 | 83 |
skin of body | 1.88e-09 | 41 |
organ component layer | 2.71e-09 | 66 |
vasculature | 7.82e-09 | 78 |
vascular system | 7.82e-09 | 78 |
vessel | 1.33e-08 | 68 |
integument | 1.69e-08 | 46 |
integumental system | 1.69e-08 | 46 |
artery | 2.46e-08 | 42 |
arterial blood vessel | 2.46e-08 | 42 |
arterial system | 2.46e-08 | 42 |
epithelial tube open at both ends | 7.87e-08 | 59 |
blood vessel | 7.87e-08 | 59 |
blood vasculature | 7.87e-08 | 59 |
vascular cord | 7.87e-08 | 59 |
epithelial vesicle | 9.82e-08 | 78 |
somite | 1.11e-07 | 71 |
presomitic mesoderm | 1.11e-07 | 71 |
presumptive segmental plate | 1.11e-07 | 71 |
dermomyotome | 1.11e-07 | 71 |
trunk paraxial mesoderm | 1.11e-07 | 71 |
unilaminar epithelium | 1.91e-07 | 148 |
paraxial mesoderm | 2.57e-07 | 72 |
presumptive paraxial mesoderm | 2.57e-07 | 72 |
dense mesenchyme tissue | 2.84e-07 | 73 |
trunk | 3.93e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.