FFCP PHASE1:Hg19::chr11:77185094..77185113,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5058|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8590|TSSclassifier=S|UniProt=Q13153|association_with_transcript=0bp_to_ENST00000278568,ENST00000356341,NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end|description=CAGE_peak_10_at_PAK1_5end|id=chr11:77185094..77185113,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;7.26e-11;5!CL:0000039;7.78e-09;7!CL:0000586;7.78e-09;7|ontology_enrichment_celltype_v019_2=CL:0002322,7.96e-11,5;CL:0000039,9.03e-09,7;CL:0000586,9.03e-09,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!7.50e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!3.43e-26!86;UBERON:0001017!2.23e-25!82;UBERON:0000073!2.62e-23!94;UBERON:0001016!2.62e-23!94;UBERON:0001049!1.94e-22!57;UBERON:0005068!1.94e-22!57;UBERON:0006241!1.94e-22!57;UBERON:0007135!1.94e-22!57;UBERON:0000955!4.65e-20!69;UBERON:0006238!4.65e-20!69;UBERON:0003075!4.88e-20!86;UBERON:0007284!4.88e-20!86;UBERON:0002616!1.73e-19!59;UBERON:0007023!1.25e-18!115;UBERON:0002346!2.96e-18!90;UBERON:0003080!5.27e-18!42;UBERON:0002780!2.52e-17!41;UBERON:0001890!2.52e-17!41;UBERON:0006240!2.52e-17!41;UBERON:0001893!4.04e-17!34;UBERON:0002020!4.97e-17!34;UBERON:0003528!4.97e-17!34;UBERON:0003056!5.78e-17!61;UBERON:0002791!1.58e-16!33;UBERON:0001869!3.53e-16!32;UBERON:0004121!1.32e-15!169;UBERON:0000033!1.44e-15!123;UBERON:0000153!2.81e-15!129;UBERON:0007811!2.81e-15!129;UBERON:0000924!1.20e-14!173;UBERON:0006601!1.20e-14!173;UBERON:0002619!3.55e-14!22;UBERON:0001950!2.34e-13!20;UBERON:0000062!2.54e-13!511;UBERON:0000956!3.91e-13!25;UBERON:0000203!3.91e-13!25;UBERON:0000922!6.46e-11!612;UBERON:0000923!7.66e-09!604;UBERON:0005291!7.66e-09!604;UBERON:0006598!7.66e-09!604;UBERON:0002532!7.66e-09!604;UBERON:0002050!1.08e-08!605;UBERON:0005423!1.08e-08!605;UBERON:0000467!2.53e-07!625;UBERON:0000480!3.46e-07!626;UBERON:0000468!4.56e-07!659|ontology_enrichment_uberon_v019=UBERON:0002619;2.55e-21;22!UBERON:0001950;2.88e-21;20!UBERON:0001893;5.49e-20;34!UBERON:0001869;6.00e-20;32!UBERON:0003528;2.27e-19;34!UBERON:0002020;2.27e-19;34!UBERON:0002791;2.31e-18;32!UBERON:0000956;3.03e-18;25!UBERON:0000203;3.03e-18;25!UBERON:0002780;5.84e-17;41!UBERON:0001890;5.84e-17;41!UBERON:0000073;1.06e-13;53!UBERON:0002616;1.06e-13;53!UBERON:0000200;4.76e-11;6!UBERON:0005409;1.45e-10;22!UBERON:0000160;2.59e-08;17!UBERON:0001017;4.22e-08;75!UBERON:0000955;7.34e-08;68!UBERON:0001016;1.01e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-24,56;UBERON:0005068,1.06e-24,56;UBERON:0006241,1.06e-24,56;UBERON:0007135,1.06e-24,56;UBERON:0000073,1.13e-24,53;UBERON:0002616,1.13e-24,53;UBERON:0001017,1.27e-24,81;UBERON:0002780,1.88e-23,41;UBERON:0001890,1.88e-23,41;UBERON:0003080,1.88e-23,41;UBERON:0006240,1.88e-23,41;UBERON:0001893,7.57e-23,34;UBERON:0003528,1.11e-22,34;UBERON:0002020,1.11e-22,34;UBERON:0001869,1.71e-22,32;UBERON:0001950,2.46e-21,20;UBERON:0002619,2.59e-21,22;UBERON:0001016,5.02e-21,89;UBERON:0002791,2.36e-20,32;UBERON:0000955,1.03e-19,68;UBERON:0006238,1.03e-19,68;UBERON:0000956,3.07e-18,25;UBERON:0000203,3.07e-18,25;UBERON:0003075,3.76e-15,82;UBERON:0007284,3.76e-15,82;UBERON:0003056,1.10e-14,61;UBERON:0011216,2.86e-14,223;UBERON:0002346,5.10e-14,86;UBERON:0007023,5.83e-14,114;UBERON:0000200,3.13e-11,6;UBERON:0010371,6.31e-11,104;UBERON:0005409,5.71e-09,25;UBERON:0004121,2.21e-08,171;UBERON:0000924,2.21e-08,171;UBERON:0006601,2.21e-08,171;UBERON:0000160,2.35e-08,17;UBERON:0010314,5.43e-08,132|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0.85870796139317,0,0.125542639594803,3.2857764471619,2.79142004129816,1.8890587515283,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0.727752183563449,0.697287110717054,0.411167888021826,0.619412741790207,1.43846196161075,1.7931249457037,0.47296445977717,0.689491361473237,0.645484683583826,4.06279459783025,0.188242339542605,0.818718450173537,0.449446968890169,1.83650335422542,1.60464513538047,1.91801137739712,0,0.199463657621632,0,0.580418477257168,0.56738522469114,1.86846674698672,0.75374599577023,2.08593167368081,0.434377689410233,0.605399502633369,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.756278537312543,0.221729397462564,0.43917392846563,0.589405839739707,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |||
|TSSclassifier=S | |||
|UniProt=Q13153 | |||
|association_with_transcript=0bp_to_ENST00000278568,ENST00000356341,NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | |||
|description=CAGE_peak_10_at_PAK1_5end | |||
|id=chr11:77185094..77185113,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.26e-11;5!CL:0000039;7.78e-09;7!CL:0000586;7.78e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.96e-11,5;CL:0000039,9.03e-09,7;CL:0000586,9.03e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.50e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.55e-21;22!UBERON:0001950;2.88e-21;20!UBERON:0001893;5.49e-20;34!UBERON:0001869;6.00e-20;32!UBERON:0003528;2.27e-19;34!UBERON:0002020;2.27e-19;34!UBERON:0002791;2.31e-18;32!UBERON:0000956;3.03e-18;25!UBERON:0000203;3.03e-18;25!UBERON:0002780;5.84e-17;41!UBERON:0001890;5.84e-17;41!UBERON:0000073;1.06e-13;53!UBERON:0002616;1.06e-13;53!UBERON:0000200;4.76e-11;6!UBERON:0005409;1.45e-10;22!UBERON:0000160;2.59e-08;17!UBERON:0001017;4.22e-08;75!UBERON:0000955;7.34e-08;68!UBERON:0001016;1.01e-07;83 | |||
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| |||
|short_description=p10@PAK1 | |||
}} |
Revision as of 19:47, 10 September 2013
Short description: | p10@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278568, ENST00000356341, NM_001128620, NM_002576, uc001oyg.3, uc001oyh.3_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | Q13153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.96e-11 | 5 |
germ line cell | 9.03e-09 | 7 |
germ cell | 9.03e-09 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.