FFCP PHASE1:Hg19::chr11:75063275..75063314,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=408|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=711|TSSclassifier=W|UniProt=B7Z1Q3,P49407|association_with_transcript=-400bp_to_NM_004041,NM_020251_5end|coexpression_cluster_id=C370|description=CAGE_peak_6_at_ARRB1_5end|id=chr11:75063275..75063314,-|ontology_enrichment_celltype=CL:0000115!5.13e-17!35;CL:0002139!4.39e-14!24;CL:0000763!7.10e-14!112;CL:0000049!7.10e-14!112;CL:0002078!1.35e-13!44;CL:0000071!4.62e-12!18;CL:0002546!4.62e-12!18;CL:0000037!1.58e-10!172;CL:0000566!1.58e-10!172;CL:0002032!3.59e-10!165;CL:0000837!3.59e-10!165;CL:0000213!4.65e-10!57;CL:0000215!4.65e-10!57;CL:0000988!2.68e-09!182|ontology_enrichment_celltype_v019=CL:0000071;1.18e-22;18!CL:0002139;1.76e-20;24!CL:0000115;2.91e-16;36!CL:0002078;1.98e-11;45!CL:1000413;9.94e-11;9!CL:0002322;1.71e-10;5!CL:0000039;1.92e-09;7!CL:0000586;1.92e-09;7!CL:0000097;4.70e-09;5!CL:0002543;4.85e-09;6!CL:0000213;1.42e-08;58!CL:0000215;1.42e-08;58!CL:0002321;3.84e-08;15!CL:0002544;4.55e-07;6!CL:0000163;8.47e-07;9|ontology_enrichment_celltype_v019_2=CL:0000071,4.55e-23,18;CL:0002546,4.55e-23,18;CL:0002139,7.84e-21,24;CL:0000115,1.08e-20,36;CL:0002078,8.44e-17,45;CL:0000213,1.06e-12,58;CL:0000215,1.06e-12,58;CL:0000763,8.12e-12,108;CL:0000049,8.12e-12,108;CL:1000413,6.03e-11,9;CL:0002322,1.75e-10,5;CL:0000039,2.39e-09,7;CL:0000586,2.39e-09,7;CL:0002543,2.96e-09,6;CL:0000097,5.26e-09,5;CL:0002028,5.26e-09,5;CL:0002544,3.74e-07,6;CL:0000163,9.15e-07,9|ontology_enrichment_development_v019=CL:0002546;1.18e-22;18|ontology_enrichment_disease_v019=DOID:8692;2.10e-23;31!DOID:1240;4.24e-14;39!DOID:2531;6.65e-09;51!DOID:0060083;6.65e-09;51!DOID:3095;1.48e-07;22!DOID:2994;1.48e-07;22|ontology_enrichment_disease_v019_2=DOID:8692,2.36e-24,31;DOID:1240,6.82e-18,39;DOID:2531,4.27e-12,51;DOID:0060083,4.27e-12,51;DOID:3095,2.21e-07,22;DOID:2994,2.21e-07,22|ontology_enrichment_uberon=UBERON:0001986!4.62e-12!18;UBERON:0004638!4.62e-12!18;UBERON:0004852!4.62e-12!18;UBERON:0000487!1.95e-09!22;UBERON:0006914!1.05e-08!25;UBERON:0002193!9.68e-07!112|ontology_enrichment_uberon_v019=UBERON:0004638;1.18e-22;18!UBERON:0001986;1.18e-22;18!UBERON:0004852;1.18e-22;18!UBERON:0000487;1.21e-17;22!UBERON:0006914;5.90e-15;25!UBERON:0000490;4.55e-12;33!UBERON:0003915;9.94e-11;9!UBERON:0004700;9.94e-11;9!UBERON:0001917;9.94e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.55e-23,18;UBERON:0001986,4.55e-23,18;UBERON:0004852,4.55e-23,18;UBERON:0000487,5.66e-18,22;UBERON:0006914,3.08e-15,25;UBERON:0003915,6.03e-11,9;UBERON:0004700,6.03e-11,9;UBERON:0001917,6.03e-11,9|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.314843125254717,3.14691421479123,0.383829398097213,0.464448369948228,0,0,0,0,0,0.880801318004542,0.553995408531877,0.401088894940283,0.868043482863407,0.223915474239924,0,0.515151135268373,0.290796477559129,0.377875943688809,1.69808842831471,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0.368277635987565,0,1.26753171787165,1.06302149982522,0.419317291016752,0.44931452458598,0.150176892841506,0.964353520182481,1.14005097496499,1.39241674039363,1.46131323011707,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0.221533894583621,0.270803863765016,0.384273959177026,0.520237390239513,0.822189523018381,0.552700035571697,1.73881851441031,0.296573126324121,0,3.1360657141493,1.0197840842781,0,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,1.24930726552346,0.710331756132051,0.821127996921047,0.604820229674197,0.267440195783507,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0,0.870648686496336,0.797747763113191,0,0,0,1.98762407366705,3.4409383804245,3.12426451446835,2.26123176769604,2.51699661725944,1.6507082516404,1.46296476575767,0.775250277507987,0.35576626268671,0.33472061276467,3.22263453687318,5.32190474002959,3.1728067481262,2.20597848207521,0.81014194788176,1.16089646769304,1.79623498100936,1.46394924628319,1.53316637465883,2.84779697870439,2.74802615895611,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0.933633106199299,0.404132016209064,0.653847612453835,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2978998220661,10.6023814657188,14.5242428586898,17.622379352613,12.6160425437814,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=408 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=711 | |||
|TSSclassifier=W | |||
|UniProt=B7Z1Q3,P49407 | |||
|association_with_transcript=-400bp_to_NM_004041,NM_020251_5end | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_6_at_ARRB1_5end | |||
|id=chr11:75063275..75063314,- | |||
|ontology_enrichment_celltype=CL:0000115!5.13e-17!35;CL:0002139!4.39e-14!24;CL:0000763!7.10e-14!112;CL:0000049!7.10e-14!112;CL:0002078!1.35e-13!44;CL:0000071!4.62e-12!18;CL:0002546!4.62e-12!18;CL:0000037!1.58e-10!172;CL:0000566!1.58e-10!172;CL:0002032!3.59e-10!165;CL:0000837!3.59e-10!165;CL:0000213!4.65e-10!57;CL:0000215!4.65e-10!57;CL:0000988!2.68e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.18e-22;18!CL:0002139;1.76e-20;24!CL:0000115;2.91e-16;36!CL:0002078;1.98e-11;45!CL:1000413;9.94e-11;9!CL:0002322;1.71e-10;5!CL:0000039;1.92e-09;7!CL:0000586;1.92e-09;7!CL:0000097;4.70e-09;5!CL:0002543;4.85e-09;6!CL:0000213;1.42e-08;58!CL:0000215;1.42e-08;58!CL:0002321;3.84e-08;15!CL:0002544;4.55e-07;6!CL:0000163;8.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.55e-23,18;CL:0002546,4.55e-23,18;CL:0002139,7.84e-21,24;CL:0000115,1.08e-20,36;CL:0002078,8.44e-17,45;CL:0000213,1.06e-12,58;CL:0000215,1.06e-12,58;CL:0000763,8.12e-12,108;CL:0000049,8.12e-12,108;CL:1000413,6.03e-11,9;CL:0002322,1.75e-10,5;CL:0000039,2.39e-09,7;CL:0000586,2.39e-09,7;CL:0002543,2.96e-09,6;CL:0000097,5.26e-09,5;CL:0002028,5.26e-09,5;CL:0002544,3.74e-07,6;CL:0000163,9.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.18e-22;18 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.10e-23;31!DOID:1240;4.24e-14;39!DOID:2531;6.65e-09;51!DOID:0060083;6.65e-09;51!DOID:3095;1.48e-07;22!DOID:2994;1.48e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.36e-24,31;DOID:1240,6.82e-18,39;DOID:2531,4.27e-12,51;DOID:0060083,4.27e-12,51;DOID:3095,2.21e-07,22;DOID:2994,2.21e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.62e-12!18;UBERON:0004638!4.62e-12!18;UBERON:0004852!4.62e-12!18;UBERON:0000487!1.95e-09!22;UBERON:0006914!1.05e-08!25;UBERON:0002193!9.68e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.18e-22;18!UBERON:0001986;1.18e-22;18!UBERON:0004852;1.18e-22;18!UBERON:0000487;1.21e-17;22!UBERON:0006914;5.90e-15;25!UBERON:0000490;4.55e-12;33!UBERON:0003915;9.94e-11;9!UBERON:0004700;9.94e-11;9!UBERON:0001917;9.94e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.55e-23,18;UBERON:0001986,4.55e-23,18;UBERON:0004852,4.55e-23,18;UBERON:0000487,5.66e-18,22;UBERON:0006914,3.08e-15,25;UBERON:0003915,6.03e-11,9;UBERON:0004700,6.03e-11,9;UBERON:0001917,6.03e-11,9 | |||
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| |||
|short_description=p6@ARRB1 | |||
}} |
Revision as of 19:42, 10 September 2013
Short description: | p6@ARRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARRB1_5end |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | -400bp_to_NM_004041, NM_020251_5end |
EntrezGene: | ARRB1 |
HGNC: | 711 |
UniProt: | B7Z1Q3P49407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.55e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.55e-23 | 18 |
endothelial cell of vascular tree | 7.84e-21 | 24 |
endothelial cell | 1.08e-20 | 36 |
meso-epithelial cell | 8.44e-17 | 45 |
lining cell | 1.06e-12 | 58 |
barrier cell | 1.06e-12 | 58 |
myeloid cell | 8.12e-12 | 108 |
common myeloid progenitor | 8.12e-12 | 108 |
endothelial cell of artery | 6.03e-11 | 9 |
embryonic stem cell | 1.75e-10 | 5 |
germ line cell | 2.39e-09 | 7 |
germ cell | 2.39e-09 | 7 |
vein endothelial cell | 2.96e-09 | 6 |
mast cell | 5.26e-09 | 5 |
basophil mast progenitor cell | 5.26e-09 | 5 |
aortic endothelial cell | 3.74e-07 | 6 |
endocrine cell | 9.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.55e-23 | 18 |
endothelium | 4.55e-23 | 18 |
cardiovascular system endothelium | 4.55e-23 | 18 |
simple squamous epithelium | 5.66e-18 | 22 |
squamous epithelium | 3.08e-15 | 25 |
endothelial tube | 6.03e-11 | 9 |
arterial system endothelium | 6.03e-11 | 9 |
endothelium of artery | 6.03e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.36e-24 | 31 |
leukemia | 6.82e-18 | 39 |
hematologic cancer | 4.27e-12 | 51 |
immune system cancer | 4.27e-12 | 51 |
germ cell and embryonal cancer | 2.21e-07 | 22 |
germ cell cancer | 2.21e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.