FFCP PHASE1:Hg19::chr11:70963976..70963985,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22941|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14295|TSSclassifier=W|UniProt=C9JFP8|association_with_transcript=-353bp_to_ENST00000413503_5end|coexpression_cluster_id=C5|description=CAGE_peak_29_at_SHANK2_5end|id=chr11:70963976..70963985,-|ontology_enrichment_celltype=CL:0000181!7.84e-13!12;CL:0000417!7.84e-13!12;CL:0000668!7.84e-13!12;CL:0000414!7.84e-13!12;CL:0000412!7.84e-13!12;CL:0000182!7.84e-13!12;CL:0002563!3.62e-10!4;CL:0000223!5.06e-07!59|ontology_enrichment_celltype_v019=CL:0000182;5.27e-53;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0000223,1.28e-11,58|ontology_enrichment_development_v019=UBERON:0004161;1.55e-57;11!UBERON:0009497;7.59e-49;13!UBERON:0001041;1.09e-21;30!UBERON:0003104;8.75e-21;31!CL:0000223;9.77e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;2.27e-10;39|ontology_enrichment_disease_v019_2=DOID:7,6.08e-10,39|ontology_enrichment_uberon=UBERON:0009854!3.53e-19!23;UBERON:0003929!5.93e-19!54;UBERON:0002107!2.26e-17!19;UBERON:0006925!2.26e-17!19;UBERON:0008836!2.26e-17!19;UBERON:0009856!6.94e-17!26;UBERON:0002368!6.47e-16!35;UBERON:0008835!6.03e-15!22;UBERON:0003894!6.03e-15!22;UBERON:0007499!4.23e-13!25;UBERON:0009497!4.23e-13!25;UBERON:0000015!4.23e-13!25;UBERON:0002423!4.23e-13!25;UBERON:0006235!4.23e-13!25;UBERON:0004161!4.23e-13!25;UBERON:0005057!1.41e-12!26;UBERON:0000949!3.71e-12!45;UBERON:0005911!6.87e-12!82;UBERON:0002530!1.93e-11!59;UBERON:0002365!1.79e-10!31;UBERON:0002330!1.79e-10!31;UBERON:0001154!1.89e-10!1;UBERON:0001153!1.89e-10!1;UBERON:0002038!2.74e-10!1;UBERON:0009661!2.74e-10!1;UBERON:0001242!3.62e-10!4;UBERON:0001262!3.62e-10!4;UBERON:0004786!3.62e-10!4;UBERON:0004808!3.62e-10!4;UBERON:0001277!3.62e-10!4;UBERON:0002372!3.96e-10!1;UBERON:0001961!3.96e-10!1;UBERON:0001744!3.96e-10!1;UBERON:0001735!3.96e-10!1;UBERON:0001007!3.63e-09!155;UBERON:0001555!3.63e-09!155;UBERON:0007026!3.63e-09!155;UBERON:0003350!2.63e-08!5;UBERON:0004921!3.05e-08!129;UBERON:0004185!3.05e-08!129;UBERON:0004907!3.16e-08!5;UBERON:0004119!3.24e-08!169;UBERON:0000925!3.24e-08!169;UBERON:0006595!3.24e-08!169;UBERON:0002046!4.86e-08!5;UBERON:0004117!4.86e-08!5;UBERON:0007689!4.86e-08!5;UBERON:0007123!4.86e-08!5;UBERON:0003091!4.86e-08!5;UBERON:0000344!2.37e-07!12;UBERON:0000077!7.98e-07!130|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;6.36e-30;31!UBERON:0002330;6.36e-30;31!UBERON:0002368;6.43e-30;33!UBERON:0000949;7.98e-20;43!UBERON:0002530;1.68e-13;57!UBERON:0002417;3.08e-13;58!UBERON:0000916;3.08e-13;58!UBERON:0005172;5.97e-12;52!UBERON:0005173;5.97e-12;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |||
|TSSclassifier=W | |||
|UniProt=C9JFP8 | |||
|association_with_transcript=-353bp_to_ENST00000413503_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_29_at_SHANK2_5end | |||
|id=chr11:70963976..70963985,- | |||
|ontology_enrichment_celltype=CL:0000181!7.84e-13!12;CL:0000417!7.84e-13!12;CL:0000668!7.84e-13!12;CL:0000414!7.84e-13!12;CL:0000412!7.84e-13!12;CL:0000182!7.84e-13!12;CL:0002563!3.62e-10!4;CL:0000223!5.06e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.27e-53;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0000223,1.28e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.55e-57;11!UBERON:0009497;7.59e-49;13!UBERON:0001041;1.09e-21;30!UBERON:0003104;8.75e-21;31!CL:0000223;9.77e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;2.27e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.08e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0009854!3.53e-19!23;UBERON:0003929!5.93e-19!54;UBERON:0002107!2.26e-17!19;UBERON:0006925!2.26e-17!19;UBERON:0008836!2.26e-17!19;UBERON:0009856!6.94e-17!26;UBERON:0002368!6.47e-16!35;UBERON:0008835!6.03e-15!22;UBERON:0003894!6.03e-15!22;UBERON:0007499!4.23e-13!25;UBERON:0009497!4.23e-13!25;UBERON:0000015!4.23e-13!25;UBERON:0002423!4.23e-13!25;UBERON:0006235!4.23e-13!25;UBERON:0004161!4.23e-13!25;UBERON:0005057!1.41e-12!26;UBERON:0000949!3.71e-12!45;UBERON:0005911!6.87e-12!82;UBERON:0002530!1.93e-11!59;UBERON:0002365!1.79e-10!31;UBERON:0002330!1.79e-10!31;UBERON:0001154!1.89e-10!1;UBERON:0001153!1.89e-10!1;UBERON:0002038!2.74e-10!1;UBERON:0009661!2.74e-10!1;UBERON:0001242!3.62e-10!4;UBERON:0001262!3.62e-10!4;UBERON:0004786!3.62e-10!4;UBERON:0004808!3.62e-10!4;UBERON:0001277!3.62e-10!4;UBERON:0002372!3.96e-10!1;UBERON:0001961!3.96e-10!1;UBERON:0001744!3.96e-10!1;UBERON:0001735!3.96e-10!1;UBERON:0001007!3.63e-09!155;UBERON:0001555!3.63e-09!155;UBERON:0007026!3.63e-09!155;UBERON:0003350!2.63e-08!5;UBERON:0004921!3.05e-08!129;UBERON:0004185!3.05e-08!129;UBERON:0004907!3.16e-08!5;UBERON:0004119!3.24e-08!169;UBERON:0000925!3.24e-08!169;UBERON:0006595!3.24e-08!169;UBERON:0002046!4.86e-08!5;UBERON:0004117!4.86e-08!5;UBERON:0007689!4.86e-08!5;UBERON:0007123!4.86e-08!5;UBERON:0003091!4.86e-08!5;UBERON:0000344!2.37e-07!12;UBERON:0000077!7.98e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;6.36e-30;31!UBERON:0002330;6.36e-30;31!UBERON:0002368;6.43e-30;33!UBERON:0000949;7.98e-20;43!UBERON:0002530;1.68e-13;57!UBERON:0002417;3.08e-13;58!UBERON:0000916;3.08e-13;58!UBERON:0005172;5.97e-12;52!UBERON:0005173;5.97e-12;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p29@SHANK2 | |||
}} |
Revision as of 19:27, 10 September 2013
Short description: | p29@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_SHANK2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -353bp_to_ENST00000413503_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | C9JFP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.27e-53 | 12 |
endodermal cell | 1.28e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.08e-10 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.