FFCP PHASE1:Hg19::chr11:3147835..3147866,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16392|TSSclassifier=S|UniProt=B4DVB0|association_with_transcript=0bp_to_ENST00000525498,uc010qxq.1_5end|coexpression_cluster_id=C106|description=CAGE_peak_2_at_OSBPL5_5end|id=chr11:3147835..3147866,-|ontology_enrichment_celltype=CL:0002368!4.39e-09!13|ontology_enrichment_celltype_v019=CL:0002368;2.60e-12;13!CL:0002202;1.47e-09;9!CL:0002632;1.47e-09;9!CL:0002327;1.54e-08;4|ontology_enrichment_celltype_v019_2=CL:0002368,1.89e-12,13;CL:0002202,1.12e-09,9;CL:0002632,1.12e-09,9;CL:0002327,1.61e-08,4;CL:0000066,3.11e-08,253|ontology_enrichment_development_v019=UBERON:0008947;2.85e-12;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.96e-16!115;UBERON:0000065!2.95e-14!53;UBERON:0001004!7.24e-13!72;UBERON:0001737!4.93e-12!9;UBERON:0004921!5.62e-12!129;UBERON:0004185!5.62e-12!129;UBERON:0001041!1.17e-11!98;UBERON:0008947!3.11e-11!38;UBERON:0003258!3.11e-11!38;UBERON:0001557!1.47e-10!19;UBERON:0000077!2.67e-10!130;UBERON:0000072!3.73e-10!46;UBERON:0004119!4.61e-10!169;UBERON:0000925!4.61e-10!169;UBERON:0006595!4.61e-10!169;UBERON:0001007!8.47e-10!155;UBERON:0001555!8.47e-10!155;UBERON:0007026!8.47e-10!155;UBERON:0000464!2.29e-09!104;UBERON:0001044!5.06e-07!6;UBERON:0003293!5.06e-07!6;UBERON:0003294!5.06e-07!6;UBERON:0010047!5.06e-07!6;UBERON:0000167!5.06e-07!6;UBERON:0000466!5.38e-07!126;UBERON:0001048!9.36e-07!168|ontology_enrichment_uberon_v019=UBERON:0001737;7.17e-19;9!UBERON:0001557;7.17e-19;9!UBERON:0000065;2.49e-15;44!UBERON:0000072;1.38e-14;37!UBERON:0001044;1.96e-10;6!UBERON:0003293;1.96e-10;6!UBERON:0003294;1.96e-10;6!UBERON:0010047;1.96e-10;6!UBERON:0003408;1.96e-10;6!UBERON:0000167;1.96e-10;6!UBERON:0001911;1.54e-08;4!UBERON:0007196;2.07e-08;15!UBERON:0001558;2.07e-08;15!UBERON:0001004;3.39e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.23e-19,9;UBERON:0008947,8.04e-18,38;UBERON:0003258,8.04e-18,38;UBERON:0001004,1.82e-17,74;UBERON:0000065,3.73e-17,54;UBERON:0001041,6.51e-16,87;UBERON:0000072,1.74e-14,47;UBERON:0004921,4.57e-14,118;UBERON:0001007,2.39e-12,145;UBERON:0001555,2.39e-12,145;UBERON:0007026,2.39e-12,145;UBERON:0004119,2.82e-12,160;UBERON:0000925,2.82e-12,160;UBERON:0006595,2.82e-12,160;UBERON:0001557,4.04e-11,19;UBERON:0001044,1.35e-10,6;UBERON:0003293,1.35e-10,6;UBERON:0003294,1.35e-10,6;UBERON:0010047,1.35e-10,6;UBERON:0000167,1.35e-10,6;UBERON:0001911,1.61e-08,4;UBERON:0005333,1.61e-08,4;UBERON:0008425,1.61e-08,4;UBERON:0005311,1.61e-08,4;UBERON:0007196,1.67e-08,15;UBERON:0001558,1.67e-08,15;UBERON:0001048,6.38e-08,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,1.53531759238885,0.928896739896456,1.83884244895785,8.73497164456925,13.6808983761711,0,0.142169232487422,0,1.66198622559563,0,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0,0,3.63239701580021,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0.361439152384566,0.50133791063589,1.30361867064741,0.795285947051099,2.43317435151318,0,0,0,1.11332214173056,0,0,0.97364218096405,1.39303789839414,2.52620124985844,0,0,0,1.19257444420023,0,1.38856200643038,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,1.20848795132744,19.7670747486813,1.95249646038536,4.41195696415042,0,0.0892997282840798,0.673588117878509,0.225222960966644,0,0,0.366403487860815,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,342.616492915388,329.920238482845,401.765386815764,352.168654934534,328.562201691348,414.037230348864,365.797339038526,347.900657667239,427.838838524386,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,6.49649014924832,6.01881166349594,10.2737242206683,0,0,0,0,0,0,0,0,12.8068687465073,8.4283842169049,6.13412286664338,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,1.2937654491571,8.98401253958239,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0.211103257785751,1.13733384070897,2.04112446331819,0.647747748306418,3.08454505380579,0,0,0,0.831076008928724,1.11937377361089,0,0,0,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,2.97512847649761,2.30628080838127,2.16941611240793,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,6.83177000351136,16.0872546128589,6.53345909167936,1.41215701165169,0,0,0,0,0,0.76463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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16392 | |||
|TSSclassifier=S | |||
|UniProt=B4DVB0 | |||
|association_with_transcript=0bp_to_ENST00000525498,uc010qxq.1_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_2_at_OSBPL5_5end | |||
|id=chr11:3147835..3147866,- | |||
|ontology_enrichment_celltype=CL:0002368!4.39e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.60e-12;13!CL:0002202;1.47e-09;9!CL:0002632;1.47e-09;9!CL:0002327;1.54e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.89e-12,13;CL:0002202,1.12e-09,9;CL:0002632,1.12e-09,9;CL:0002327,1.61e-08,4;CL:0000066,3.11e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.85e-12;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-16!115;UBERON:0000065!2.95e-14!53;UBERON:0001004!7.24e-13!72;UBERON:0001737!4.93e-12!9;UBERON:0004921!5.62e-12!129;UBERON:0004185!5.62e-12!129;UBERON:0001041!1.17e-11!98;UBERON:0008947!3.11e-11!38;UBERON:0003258!3.11e-11!38;UBERON:0001557!1.47e-10!19;UBERON:0000077!2.67e-10!130;UBERON:0000072!3.73e-10!46;UBERON:0004119!4.61e-10!169;UBERON:0000925!4.61e-10!169;UBERON:0006595!4.61e-10!169;UBERON:0001007!8.47e-10!155;UBERON:0001555!8.47e-10!155;UBERON:0007026!8.47e-10!155;UBERON:0000464!2.29e-09!104;UBERON:0001044!5.06e-07!6;UBERON:0003293!5.06e-07!6;UBERON:0003294!5.06e-07!6;UBERON:0010047!5.06e-07!6;UBERON:0000167!5.06e-07!6;UBERON:0000466!5.38e-07!126;UBERON:0001048!9.36e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.17e-19;9!UBERON:0001557;7.17e-19;9!UBERON:0000065;2.49e-15;44!UBERON:0000072;1.38e-14;37!UBERON:0001044;1.96e-10;6!UBERON:0003293;1.96e-10;6!UBERON:0003294;1.96e-10;6!UBERON:0010047;1.96e-10;6!UBERON:0003408;1.96e-10;6!UBERON:0000167;1.96e-10;6!UBERON:0001911;1.54e-08;4!UBERON:0007196;2.07e-08;15!UBERON:0001558;2.07e-08;15!UBERON:0001004;3.39e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.23e-19,9;UBERON:0008947,8.04e-18,38;UBERON:0003258,8.04e-18,38;UBERON:0001004,1.82e-17,74;UBERON:0000065,3.73e-17,54;UBERON:0001041,6.51e-16,87;UBERON:0000072,1.74e-14,47;UBERON:0004921,4.57e-14,118;UBERON:0001007,2.39e-12,145;UBERON:0001555,2.39e-12,145;UBERON:0007026,2.39e-12,145;UBERON:0004119,2.82e-12,160;UBERON:0000925,2.82e-12,160;UBERON:0006595,2.82e-12,160;UBERON:0001557,4.04e-11,19;UBERON:0001044,1.35e-10,6;UBERON:0003293,1.35e-10,6;UBERON:0003294,1.35e-10,6;UBERON:0010047,1.35e-10,6;UBERON:0000167,1.35e-10,6;UBERON:0001911,1.61e-08,4;UBERON:0005333,1.61e-08,4;UBERON:0008425,1.61e-08,4;UBERON:0005311,1.61e-08,4;UBERON:0007196,1.67e-08,15;UBERON:0001558,1.67e-08,15;UBERON:0001048,6.38e-08,160 | |||
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| |||
|short_description=p2@OSBPL5 | |||
}} |
Revision as of 17:25, 10 September 2013
Short description: | p2@OSBPL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_OSBPL5_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000525498, uc010qxq.1_5end |
EntrezGene: | OSBPL5 |
HGNC: | 16392 |
UniProt: | B4DVB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.89e-12 | 13 |
epithelial cell of tracheobronchial tree | 1.12e-09 | 9 |
epithelial cell of lower respiratory tract | 1.12e-09 | 9 |
mammary gland epithelial cell | 1.61e-08 | 4 |
epithelial cell | 3.11e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.23e-19 | 9 |
respiratory primordium | 8.04e-18 | 38 |
endoderm of foregut | 8.04e-18 | 38 |
respiratory system | 1.82e-17 | 74 |
respiratory tract | 3.73e-17 | 54 |
foregut | 6.51e-16 | 87 |
segment of respiratory tract | 1.74e-14 | 47 |
subdivision of digestive tract | 4.57e-14 | 118 |
digestive system | 2.39e-12 | 145 |
digestive tract | 2.39e-12 | 145 |
primitive gut | 2.39e-12 | 145 |
endoderm-derived structure | 2.82e-12 | 160 |
endoderm | 2.82e-12 | 160 |
presumptive endoderm | 2.82e-12 | 160 |
upper respiratory tract | 4.04e-11 | 19 |
saliva-secreting gland | 1.35e-10 | 6 |
gland of oral region | 1.35e-10 | 6 |
gland of foregut | 1.35e-10 | 6 |
oral gland | 1.35e-10 | 6 |
oral cavity | 1.35e-10 | 6 |
mammary gland | 1.61e-08 | 4 |
mammary bud | 1.61e-08 | 4 |
mammary ridge | 1.61e-08 | 4 |
mammary placode | 1.61e-08 | 4 |
tracheobronchial tree | 1.67e-08 | 15 |
lower respiratory tract | 1.67e-08 | 15 |
primordium | 6.38e-08 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.