FFCP PHASE1:Hg19::chr11:2162486..2162497,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5466|TSSclassifier=S|UniProt=C9JAF2|association_with_transcript=-18bp_to_ENST00000434045_5end|coexpression_cluster_id=C172|description=CAGE_peak_56_at_IGF2_5end|id=chr11:2162486..2162497,-|ontology_enrichment_celltype=CL:0000188!8.91e-10!9;CL:0000349!3.39e-08!3;CL:0002577!3.39e-08!3;CL:0002541!3.01e-07!3|ontology_enrichment_celltype_v019=CL:0000349;2.91e-36;19!CL:0002577;2.88e-19;3!CL:0002536;2.19e-13;2!CL:0002537;1.03e-11;5!CL:0002541;1.75e-08;3!CL:0002581;5.67e-07;1|ontology_enrichment_celltype_v019_2=CL:0000349,3.07e-36,19;CL:0002577,2.55e-19,3;CL:0002536,2.12e-13,2;CL:0002537,1.01e-11,5;CL:0002541,1.75e-08,3;CL:0002581,6.20e-07,1|ontology_enrichment_development_v019=UBERON:0004161;8.00e-09;11!UBERON:0009497;1.77e-07;13!UBERON:0000358;2.09e-07;1!UBERON:0003124;3.31e-07;1!UBERON:0004140;3.31e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.71e-22!14;UBERON:0000158!2.71e-22!14;UBERON:0000478!3.95e-16!24;UBERON:0003124!8.29e-16!7;UBERON:0001987!2.97e-10!4;UBERON:0004340!2.97e-10!4;UBERON:0000305!9.95e-09!7;UBERON:0004871!1.47e-07!8;UBERON:0000476!3.01e-07!3;UBERON:0000920!3.01e-07!3|ontology_enrichment_uberon_v019=UBERON:0000478;1.18e-39;24!UBERON:0005631;1.19e-28;10!UBERON:0000158;1.19e-28;10!UBERON:0001987;9.66e-25;4!UBERON:0000305;6.14e-22;7!UBERON:0003124;1.75e-08;3!UBERON:0000920;1.75e-08;3!UBERON:0000922;2.27e-08;49!UBERON:0002426;1.49e-07;1!UBERON:0003831;1.49e-07;1!UBERON:0003898;1.49e-07;1!UBERON:0004830;1.49e-07;1!UBERON:0003830;1.49e-07;1!UBERON:0005175;1.49e-07;1!UBERON:0001774;1.49e-07;1!UBERON:0001103;1.49e-07;1!UBERON:0007029;2.44e-07;1!UBERON:0001301;5.67e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-50,14;UBERON:0000158,3.27e-50,14;UBERON:0000478,1.18e-39,24;UBERON:0003124,3.26e-30,7;UBERON:0001987,7.82e-25,4;UBERON:0004340,7.82e-25,4;UBERON:0000305,5.89e-22,7;UBERON:0004871,3.44e-19,8;UBERON:0004923,5.06e-09,66;UBERON:0000920,1.75e-08,3;UBERON:0002426,1.54e-07,1;UBERON:0003831,1.54e-07,1;UBERON:0003898,1.54e-07,1;UBERON:0004830,1.54e-07,1;UBERON:0003830,1.54e-07,1;UBERON:0005175,1.54e-07,1;UBERON:0001774,1.54e-07,1;UBERON:0001103,1.54e-07,1;UBERON:0010084,1.54e-07,1;UBERON:0007029,2.52e-07,1;UBERON:0001301,4.60e-07,1|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,8.30077214094655,7.3854753903967,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,9.39695471483404,4.99306318531491,9.97887967987945,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0,0.290033387828457,0.0852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72986763370456,9.50286978664444,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,1.5950057986596,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,0,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68733889946905,0,0,2.04836273998782,2.55489160981616,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0,2.20309270166992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8512400041998,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,2.78482710962785,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt=C9JAF2 | |||
|association_with_transcript=-18bp_to_ENST00000434045_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_56_at_IGF2_5end | |||
|id=chr11:2162486..2162497,- | |||
|ontology_enrichment_celltype=CL:0000188!8.91e-10!9;CL:0000349!3.39e-08!3;CL:0002577!3.39e-08!3;CL:0002541!3.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.91e-36;19!CL:0002577;2.88e-19;3!CL:0002536;2.19e-13;2!CL:0002537;1.03e-11;5!CL:0002541;1.75e-08;3!CL:0002581;5.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.07e-36,19;CL:0002577,2.55e-19,3;CL:0002536,2.12e-13,2;CL:0002537,1.01e-11,5;CL:0002541,1.75e-08,3;CL:0002581,6.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.00e-09;11!UBERON:0009497;1.77e-07;13!UBERON:0000358;2.09e-07;1!UBERON:0003124;3.31e-07;1!UBERON:0004140;3.31e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.71e-22!14;UBERON:0000158!2.71e-22!14;UBERON:0000478!3.95e-16!24;UBERON:0003124!8.29e-16!7;UBERON:0001987!2.97e-10!4;UBERON:0004340!2.97e-10!4;UBERON:0000305!9.95e-09!7;UBERON:0004871!1.47e-07!8;UBERON:0000476!3.01e-07!3;UBERON:0000920!3.01e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.18e-39;24!UBERON:0005631;1.19e-28;10!UBERON:0000158;1.19e-28;10!UBERON:0001987;9.66e-25;4!UBERON:0000305;6.14e-22;7!UBERON:0003124;1.75e-08;3!UBERON:0000920;1.75e-08;3!UBERON:0000922;2.27e-08;49!UBERON:0002426;1.49e-07;1!UBERON:0003831;1.49e-07;1!UBERON:0003898;1.49e-07;1!UBERON:0004830;1.49e-07;1!UBERON:0003830;1.49e-07;1!UBERON:0005175;1.49e-07;1!UBERON:0001774;1.49e-07;1!UBERON:0001103;1.49e-07;1!UBERON:0007029;2.44e-07;1!UBERON:0001301;5.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-50,14;UBERON:0000158,3.27e-50,14;UBERON:0000478,1.18e-39,24;UBERON:0003124,3.26e-30,7;UBERON:0001987,7.82e-25,4;UBERON:0004340,7.82e-25,4;UBERON:0000305,5.89e-22,7;UBERON:0004871,3.44e-19,8;UBERON:0004923,5.06e-09,66;UBERON:0000920,1.75e-08,3;UBERON:0002426,1.54e-07,1;UBERON:0003831,1.54e-07,1;UBERON:0003898,1.54e-07,1;UBERON:0004830,1.54e-07,1;UBERON:0003830,1.54e-07,1;UBERON:0005175,1.54e-07,1;UBERON:0001774,1.54e-07,1;UBERON:0001103,1.54e-07,1;UBERON:0010084,1.54e-07,1;UBERON:0007029,2.52e-07,1;UBERON:0001301,4.60e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,8.30077214094655,7.3854753903967,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,9.39695471483404,4.99306318531491,9.97887967987945,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0,0.290033387828457,0.0852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72986763370456,9.50286978664444,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,1.5950057986596,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,0,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68733889946905,0,0,2.04836273998782,2.55489160981616,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0,2.20309270166992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8512400041998,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,2.78482710962785,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,2.7497734750418,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.571812353413251,0,0,3.99874026295933,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,10.4383298820438,3.88568794447312,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.594092800654172,0.8453114551668,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0.788857810965923,0,0.436350690340377,2.1161073620616,0,0,0.432626562123789,0,0,0,0,0,0,0,1.28823786971007,0,0,0,0.213233981900981,2.85677317756488,0,0.993195428733726,0,0,0.404234377916439,0.217716747896961,9.24029912930259,0.0673520530145875,0.143444410785353,4.65724499164419,0,0,0,0,4.69281884806909,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p56@IGF2 | |||
}} |
Revision as of 17:13, 10 September 2013
Short description: | p56@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_56_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -18bp_to_ENST00000434045_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | C9JAF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.07e-36 | 19 |
placental epithelial cell | 2.55e-19 | 3 |
amniotic epithelial cell | 2.12e-13 | 2 |
amnion mesenchymal stem cell | 1.01e-11 | 5 |
chorionic membrane mesenchymal stem cell | 1.75e-08 | 3 |
perirenal preadipocyte | 6.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.27e-50 | 14 |
membranous layer | 3.27e-50 | 14 |
extraembryonic structure | 1.18e-39 | 24 |
chorion | 3.26e-30 | 7 |
placenta | 7.82e-25 | 4 |
allantois | 7.82e-25 | 4 |
amnion | 5.89e-22 | 7 |
somatic layer of lateral plate mesoderm | 3.44e-19 | 8 |
organ component layer | 5.06e-09 | 66 |
egg chorion | 1.75e-08 | 3 |
chest muscle | 1.54e-07 | 1 |
respiratory system muscle | 1.54e-07 | 1 |
skeletal muscle of trunk | 1.54e-07 | 1 |
respiratory system skeletal muscle | 1.54e-07 | 1 |
thoracic segment muscle | 1.54e-07 | 1 |
chest organ | 1.54e-07 | 1 |
muscle of trunk | 1.54e-07 | 1 |
diaphragm | 1.54e-07 | 1 |
future diaphragm | 1.54e-07 | 1 |
surface | 2.52e-07 | 1 |
epididymis | 4.60e-07 | 1 |
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