FFCP PHASE1:Hg19::chr11:2017110..2017135,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C227|description=CAGE_peak_at_chr11:2017110..2017135,+|id=chr11:2017110..2017135,+|ontology_enrichment_celltype=CL:0000349!1.20e-08!3;CL:0002577!1.20e-08!3;CL:0002541!2.01e-08!3|ontology_enrichment_celltype_v019=CL:0000349;3.42e-39;19!CL:0002577;1.66e-19;3!CL:0002536;1.05e-13;2!CL:0002537;1.52e-12;5!CL:0002541;7.04e-10;3!CL:0002616;5.58e-08;1!CL:0002581;1.07e-07;1|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-39,19;CL:0002577,1.06e-19,3;CL:0002536,8.65e-14,2;CL:0002537,1.55e-12,5;CL:0002541,7.05e-10,3;CL:0002616,5.22e-08,1;CL:0002581,8.84e-08,1|ontology_enrichment_development_v019=UBERON:0000358;1.07e-07;1!UBERON:0008947;4.91e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;2.10e-07;1!DOID:10165;2.10e-07;1!DOID:1798;2.10e-07;1|ontology_enrichment_disease_v019_2=DOID:1799,1.80e-07,1;DOID:10165,1.80e-07,1;DOID:1798,1.80e-07,1|ontology_enrichment_uberon=UBERON:0005631!2.10e-24!14;UBERON:0000158!2.10e-24!14;UBERON:0001737!6.68e-21!9;UBERON:0000478!9.59e-21!24;UBERON:0003124!4.38e-17!7;UBERON:0001557!4.73e-16!19;UBERON:0001987!2.34e-10!4;UBERON:0004340!2.34e-10!4;UBERON:0000305!1.40e-09!7;UBERON:0000072!1.96e-09!46;UBERON:0000476!2.01e-08!3;UBERON:0000920!2.01e-08!3;UBERON:0004871!2.61e-08!8;UBERON:0004923!4.69e-08!57;UBERON:0001723!5.28e-08!3;UBERON:0001033!5.28e-08!3;UBERON:0010056!5.28e-08!3;UBERON:0008947!1.01e-07!38;UBERON:0003258!1.01e-07!38;UBERON:0000065!1.12e-07!53;UBERON:0003104!7.39e-07!238;UBERON:0009142!7.39e-07!238|ontology_enrichment_uberon_v019=UBERON:0000478;1.89e-36;24!UBERON:0005631;2.64e-31;10!UBERON:0000158;2.64e-31;10!UBERON:0000305;3.75e-23;7!UBERON:0001737;1.02e-16;9!UBERON:0001557;1.02e-16;9!UBERON:0001987;8.92e-15;4!UBERON:0005406;5.51e-14;2!UBERON:0003124;7.04e-10;3!UBERON:0000920;7.04e-10;3!UBERON:0001723;2.53e-09;3!UBERON:0001033;2.53e-09;3!UBERON:0002426;6.37e-08;1!UBERON:0003831;6.37e-08;1!UBERON:0003898;6.37e-08;1!UBERON:0004830;6.37e-08;1!UBERON:0003830;6.37e-08;1!UBERON:0005175;6.37e-08;1!UBERON:0001774;6.37e-08;1!UBERON:0001103;6.37e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-44,14;UBERON:0000158,1.35e-44,14;UBERON:0000478,1.60e-36,24;UBERON:0000305,3.35e-23,7;UBERON:0003124,5.05e-23,7;UBERON:0004871,2.78e-20,8;UBERON:0001737,1.00e-16,9;UBERON:0001557,5.95e-15,19;UBERON:0001987,6.42e-15,4;UBERON:0004340,6.42e-15,4;UBERON:0005406,4.26e-14,2;UBERON:0000920,7.05e-10,3;UBERON:0004923,8.96e-10,66;UBERON:0001723,2.75e-09,3;UBERON:0001033,2.75e-09,3;UBERON:0010056,2.75e-09,3;UBERON:0002426,6.37e-08,1;UBERON:0003831,6.37e-08,1;UBERON:0003898,6.37e-08,1;UBERON:0004830,6.37e-08,1;UBERON:0003830,6.37e-08,1;UBERON:0005175,6.37e-08,1;UBERON:0001774,6.37e-08,1;UBERON:0001103,6.37e-08,1;UBERON:0010084,6.37e-08,1;UBERON:0000072,3.26e-07,47|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,7.85104671690332,0,0,0,0,0.697801167972428,2.83973783769224,2.90143676051299,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.946454400318751,1.34867752062481,0.723033089650446,1.10293972732394,0.435758888184812,0.71181185733329,1.61797569792197,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,1.02943027143257,0,0,0,3.94065842880137,1.66435439510497,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.413509717453592,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,9.50286978664444,11.3649459776716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.434589487688032,7.65602783356607,0.274792780205587,17.0571128325963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6180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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_at_chr11:2017110..2017135,+ | |||
|id=chr11:2017110..2017135,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.20e-08!3;CL:0002577!1.20e-08!3;CL:0002541!2.01e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.42e-39;19!CL:0002577;1.66e-19;3!CL:0002536;1.05e-13;2!CL:0002537;1.52e-12;5!CL:0002541;7.04e-10;3!CL:0002616;5.58e-08;1!CL:0002581;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-39,19;CL:0002577,1.06e-19,3;CL:0002536,8.65e-14,2;CL:0002537,1.55e-12,5;CL:0002541,7.05e-10,3;CL:0002616,5.22e-08,1;CL:0002581,8.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-07;1!UBERON:0008947;4.91e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.10e-07;1!DOID:10165;2.10e-07;1!DOID:1798;2.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.80e-07,1;DOID:10165,1.80e-07,1;DOID:1798,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.10e-24!14;UBERON:0000158!2.10e-24!14;UBERON:0001737!6.68e-21!9;UBERON:0000478!9.59e-21!24;UBERON:0003124!4.38e-17!7;UBERON:0001557!4.73e-16!19;UBERON:0001987!2.34e-10!4;UBERON:0004340!2.34e-10!4;UBERON:0000305!1.40e-09!7;UBERON:0000072!1.96e-09!46;UBERON:0000476!2.01e-08!3;UBERON:0000920!2.01e-08!3;UBERON:0004871!2.61e-08!8;UBERON:0004923!4.69e-08!57;UBERON:0001723!5.28e-08!3;UBERON:0001033!5.28e-08!3;UBERON:0010056!5.28e-08!3;UBERON:0008947!1.01e-07!38;UBERON:0003258!1.01e-07!38;UBERON:0000065!1.12e-07!53;UBERON:0003104!7.39e-07!238;UBERON:0009142!7.39e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.89e-36;24!UBERON:0005631;2.64e-31;10!UBERON:0000158;2.64e-31;10!UBERON:0000305;3.75e-23;7!UBERON:0001737;1.02e-16;9!UBERON:0001557;1.02e-16;9!UBERON:0001987;8.92e-15;4!UBERON:0005406;5.51e-14;2!UBERON:0003124;7.04e-10;3!UBERON:0000920;7.04e-10;3!UBERON:0001723;2.53e-09;3!UBERON:0001033;2.53e-09;3!UBERON:0002426;6.37e-08;1!UBERON:0003831;6.37e-08;1!UBERON:0003898;6.37e-08;1!UBERON:0004830;6.37e-08;1!UBERON:0003830;6.37e-08;1!UBERON:0005175;6.37e-08;1!UBERON:0001774;6.37e-08;1!UBERON:0001103;6.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-44,14;UBERON:0000158,1.35e-44,14;UBERON:0000478,1.60e-36,24;UBERON:0000305,3.35e-23,7;UBERON:0003124,5.05e-23,7;UBERON:0004871,2.78e-20,8;UBERON:0001737,1.00e-16,9;UBERON:0001557,5.95e-15,19;UBERON:0001987,6.42e-15,4;UBERON:0004340,6.42e-15,4;UBERON:0005406,4.26e-14,2;UBERON:0000920,7.05e-10,3;UBERON:0004923,8.96e-10,66;UBERON:0001723,2.75e-09,3;UBERON:0001033,2.75e-09,3;UBERON:0010056,2.75e-09,3;UBERON:0002426,6.37e-08,1;UBERON:0003831,6.37e-08,1;UBERON:0003898,6.37e-08,1;UBERON:0004830,6.37e-08,1;UBERON:0003830,6.37e-08,1;UBERON:0005175,6.37e-08,1;UBERON:0001774,6.37e-08,1;UBERON:0001103,6.37e-08,1;UBERON:0010084,6.37e-08,1;UBERON:0000072,3.26e-07,47 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,7.85104671690332,0,0,0,0,0.697801167972428,2.83973783769224,2.90143676051299,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.946454400318751,1.34867752062481,0.723033089650446,1.10293972732394,0.435758888184812,0.71181185733329,1.61797569792197,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,1.02943027143257,0,0,0,3.94065842880137,1.66435439510497,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.413509717453592,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,9.50286978664444,11.3649459776716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.434589487688032,7.65602783356607,0.274792780205587,17.0571128325963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61804353109152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,4.79543062997113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.15525666150338,0,0,0,0,0,0,1.57144016688853,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.808468755832877,0.217716747896961,3.76456631193809,0,0,1.66330178273007,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr11:2017110..2017135,+ | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p@chr11:2017110..2017135, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:2017110..2017135, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-39 | 19 |
placental epithelial cell | 1.06e-19 | 3 |
amniotic epithelial cell | 8.65e-14 | 2 |
amnion mesenchymal stem cell | 1.55e-12 | 5 |
chorionic membrane mesenchymal stem cell | 7.05e-10 | 3 |
perirenal adipocyte cell | 5.22e-08 | 1 |
perirenal preadipocyte | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.35e-44 | 14 |
membranous layer | 1.35e-44 | 14 |
extraembryonic structure | 1.60e-36 | 24 |
amnion | 3.35e-23 | 7 |
chorion | 5.05e-23 | 7 |
somatic layer of lateral plate mesoderm | 2.78e-20 | 8 |
larynx | 1.00e-16 | 9 |
upper respiratory tract | 5.95e-15 | 19 |
placenta | 6.42e-15 | 4 |
allantois | 6.42e-15 | 4 |
perirenal fat | 4.26e-14 | 2 |
egg chorion | 7.05e-10 | 3 |
organ component layer | 8.96e-10 | 66 |
tongue | 2.75e-09 | 3 |
gustatory system | 2.75e-09 | 3 |
future tongue | 2.75e-09 | 3 |
chest muscle | 6.37e-08 | 1 |
respiratory system muscle | 6.37e-08 | 1 |
skeletal muscle of trunk | 6.37e-08 | 1 |
respiratory system skeletal muscle | 6.37e-08 | 1 |
thoracic segment muscle | 6.37e-08 | 1 |
chest organ | 6.37e-08 | 1 |
muscle of trunk | 6.37e-08 | 1 |
diaphragm | 6.37e-08 | 1 |
future diaphragm | 6.37e-08 | 1 |
segment of respiratory tract | 3.26e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.80e-07 | 1 |
endocrine pancreas cancer | 1.80e-07 | 1 |
pancreatic endocrine carcinoma | 1.80e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.