FFCP PHASE1:Hg19::chr11:18416135..18416147,+: Difference between revisions
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{{FFCP | 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110.200287476751,103.543776988959,67.7489289422601,120.623054275681,146.010134102051,73.4866809091177,50.5124233148879,18.9277347342976,38.716585911868,13.9387034393702,20.8795433572169,43.300831772844,50.0088544539481,26.4315640866985,41.9067888130681,43.8498054968581,26.971938098181,59.1908638918702,43.4056586109558,84.1333354452302,176.294164788507,44.9059444250558,33.424595179512,6.22162962682788,87.6871389777248,56.9990164944328,45.4711796031247,23.5879091169417,252.163004381316,25.7800790497525,75.9952104248734,72.7637596514041,46.3258295287594,22.7006381426734,38.8463555031384,18.6039745266861,44.789562722374,70.853481702223,56.6080259832579,25.6343485225111,55.5877058397351,34.1162385207591,54.4191795460308,46.8477188899028,12.2901881954114,102.397400910401,114.349530251817,32.0228299314188,52.1960396662212,33.3807570314988,8.4140284876362,15.5866233958143,7.98169295285756,8.61488729811171,6.30179240554295,7.19235425627866,10.0114900291748,7.13847101295772,16.8814075821764,68.6583789883849,58.5137229284156,25.8777492176758,100.684873203332,26.9240371163439,13.9241355481392,27.4517698474789,88.9519352982523,24.2269343482259,8.38101422340552,188.665248971631,22.4741251049909,10.1981752773776,7.02970288752463,9.71427943555565,9.2587082883104,12.0334457984008,29.6059194102878,38.2082607359757,24.9737166990661,39.4785901406349,9.64263304580916,16.4779023887224,7.89055285507621,5.46389259243114,19.4258190656179,103.710588800201,52.6468188972875,13.7978557942968,8.94509720454747,91.8366143668433,78.751832539585,23.9403933194068,5.81327682689207,10.3700700426102,17.3500156896804,122.21501662974,120.871177035424,31.5926325260821,239.706648998546,32.1988748269707,22.4277171270327,21.6462068477168,51.8040410407592,44.8989594757088,6.91259661814092,22.3718226586544,55.4977083426351,70.4714857358234,4.65725755210022,31.6167478590789,347.741358329703,253.21781882902,23.4896406775364,10.7965256976767,71.0781502646631,21.3651516272005,37.6772501162427,40.593505096837,19.9141507154247,20.5866727846653,35.8111395290463,16.4109725273045,44.0489719951944,153.806782926855,32.0041228361348,38.8186015282962,22.0745156108997,23.9861821144377,21.5730523143437,23.0963016159593,8.83388102017254,16.6345984183168,8.8757702792514,84.1139217704694,29.8868859175934,25.5253236375366,173.897611309376,9.2848048074942,25.0555358918141,18.134548871752,10.9550458236978,7.79839781787719,6.02026249236095,20.6680746473072,9.31483415615531,8.29066311646717,24.8642615042238,39.8034669438424,34.6631721473564,51.0499343306071,30.7846076597593,10.8172916244059,0,40.5915542373087,16.3002617211992,30.8766862437079,92.260374459594,32.6606189320612,21.1691662823381,7.46252495512901,6.20597975171371,26.4410137557216,18.5690256541717,43.1453917704521,37.3689780061065,77.9316444935263,25.6498047861005,9.49950788103631,44.4142165709801,50.3082952595363,24.650851403339,52.2854877312611,25.947507810589,26.8630786416216,22.6261973260757,25.0993966973022,51.0207147965413,65.6994638729672,20.0475968459901,57.7792573208349,22.6357303223074,17.9133676296013,112.198972306132|short_description=p2@LDHA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6535 | |||
|TSSclassifier=S | |||
|UniProt=F8W819 | |||
|association_with_transcript=2bp_to_ENST00000227157_5end | |||
|coexpression_cluster_id=C3123 | |||
|description=CAGE_peak_2_at_LDHA_5end | |||
|id=chr11:18416135..18416147,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.07e-28!682;CL:0000548!2.62e-27!679;CL:0000004!2.62e-27!679;CL:0000255!2.62e-27!679;CL:0000144!1.93e-20!625;CL:0000003!2.03e-19!722;CL:0002371!1.98e-18!591;CL:0000055!2.61e-17!180;CL:0000063!3.00e-12!578;CL:0000034!1.97e-11!444;CL:0000723!1.73e-10!436;CL:0000048!2.69e-10!430;CL:0000359!8.07e-10!32;CL:0000057!5.43e-09!75;CL:0002620!2.46e-08!23;CL:0000680!2.24e-07!57;CL:0000056!2.24e-07!57;CL:0000355!2.24e-07!57;CL:0000187!5.40e-07!54;CL:0000192!6.05e-07!42;CL:0000514!6.05e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.33e-09;32!CL:0002620;2.63e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,7.29e-11,441;CL:0000723,5.98e-10,433;CL:0000359,8.07e-10,32;CL:0000048,9.17e-10,427;CL:0000057,2.72e-09,76;CL:0002620,2.46e-08,23;CL:0000680,4.97e-07,58;CL:0000056,4.97e-07,58;CL:0000355,4.97e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-10!239;DOID:162!1.70e-10!235;DOID:0050686!1.12e-08!137;DOID:2531!6.97e-08!51;DOID:0060083!6.97e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.26e-10,239;DOID:162,1.70e-10,235;DOID:0050686,1.12e-08,137;DOID:2531,6.97e-08,51;DOID:0060083,6.97e-08,51 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;2.87e-08;33!UBERON:0004571;2.87e-08;33!UBERON:0001637;6.10e-08;42!UBERON:0003509;6.10e-08;42!UBERON:0004572;6.10e-08;42 | |||
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| |||
|short_description=p2@LDHA | |||
}} |
Revision as of 17:00, 10 September 2013
Short description: | p2@LDHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LDHA_5end |
Coexpression cluster: | C3123_basal_Adipocyte_Preadipocyte_Olfactory_serous_mesenchymal_Smooth |
Association with transcript: | 2bp_to_ENST00000227157_5end |
EntrezGene: | LDHA |
HGNC: | 6535 |
UniProt: | F8W819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 7.29e-11 | 441 |
somatic stem cell | 5.98e-10 | 433 |
vascular associated smooth muscle cell | 8.07e-10 | 32 |
multi fate stem cell | 9.17e-10 | 427 |
fibroblast | 2.72e-09 | 76 |
skin fibroblast | 2.46e-08 | 23 |
muscle precursor cell | 4.97e-07 | 58 |
myoblast | 4.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.97e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 2.11e-11 | 42 |
arterial blood vessel | 2.11e-11 | 42 |
arterial system | 2.11e-11 | 42 |
systemic artery | 3.68e-09 | 33 |
systemic arterial system | 3.68e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 2.31e-08 | 83 |
epithelial tube open at both ends | 4.36e-08 | 59 |
blood vessel | 4.36e-08 | 59 |
blood vasculature | 4.36e-08 | 59 |
vascular cord | 4.36e-08 | 59 |
unilaminar epithelium | 5.19e-08 | 148 |
integument | 1.01e-07 | 46 |
integumental system | 1.01e-07 | 46 |
vessel | 1.18e-07 | 68 |
somite | 1.35e-07 | 71 |
presomitic mesoderm | 1.35e-07 | 71 |
presumptive segmental plate | 1.35e-07 | 71 |
dermomyotome | 1.35e-07 | 71 |
trunk paraxial mesoderm | 1.35e-07 | 71 |
skin of body | 2.88e-07 | 41 |
dense mesenchyme tissue | 3.52e-07 | 73 |
multilaminar epithelium | 4.04e-07 | 83 |
paraxial mesoderm | 4.12e-07 | 72 |
presumptive paraxial mesoderm | 4.12e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.26e-10 | 239 |
cancer | 1.70e-10 | 235 |
organ system cancer | 1.12e-08 | 137 |
hematologic cancer | 6.97e-08 | 51 |
immune system cancer | 6.97e-08 | 51 |
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