FFCP PHASE1:Hg19::chr11:16947414..16947446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:16947414..16947446,-|id=chr11:16947414..16947446,-|ontology_enrichment_celltype=CL:0000066!7.50e-10!254;CL:0002076!1.97e-07!43|ontology_enrichment_celltype_v019=CL:0000349;8.19e-09;19!CL:0000453;6.26e-07;5!CL:0002577;7.36e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,2.27e-09,253;CL:0000349,8.25e-09,19;CL:0000453,5.63e-07,5;CL:0002577,7.28e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.09e-17!106;DOID:0050687!2.37e-15!143;DOID:299!6.01e-09!25;DOID:1749!2.74e-07!14|ontology_enrichment_disease_v019=DOID:1749;2.18e-12;14!DOID:299;9.28e-09;25!DOID:170;1.31e-07;6|ontology_enrichment_disease_v019_2=DOID:305,8.57e-19,106;DOID:0050687,1.12e-15,143;DOID:1749,1.96e-12,14;DOID:299,6.94e-09,25;DOID:162,1.12e-07,235;DOID:170,1.95e-07,6;DOID:14566,2.82e-07,239|ontology_enrichment_uberon=UBERON:0000064!4.58e-17!219;UBERON:0007023!2.09e-14!115;UBERON:0000062!1.19e-12!511;UBERON:0004119!4.89e-12!169;UBERON:0000925!4.89e-12!169;UBERON:0006595!4.89e-12!169;UBERON:0000481!2.86e-10!347;UBERON:0001007!7.64e-10!155;UBERON:0001555!7.64e-10!155;UBERON:0007026!7.64e-10!155;UBERON:0000477!9.27e-10!286;UBERON:0001049!3.62e-09!57;UBERON:0005068!3.62e-09!57;UBERON:0006241!3.62e-09!57;UBERON:0007135!3.62e-09!57;UBERON:0004921!6.93e-09!129;UBERON:0004185!6.93e-09!129;UBERON:0000468!1.33e-08!659;UBERON:0000073!2.92e-08!94;UBERON:0001016!2.92e-08!94;UBERON:0000467!2.98e-08!625;UBERON:0005743!3.00e-08!86;UBERON:0000924!3.07e-08!173;UBERON:0006601!3.07e-08!173;UBERON:0000480!3.90e-08!626;UBERON:0000955!4.50e-08!69;UBERON:0006238!4.50e-08!69;UBERON:0001017!5.54e-08!82;UBERON:0004121!5.65e-08!169;UBERON:0000077!5.76e-08!130;UBERON:0002616!1.12e-07!59;UBERON:0000923!1.12e-07!604;UBERON:0005291!1.12e-07!604;UBERON:0006598!1.12e-07!604;UBERON:0002532!1.12e-07!604;UBERON:0002050!1.46e-07!605;UBERON:0005423!1.46e-07!605;UBERON:0000922!1.55e-07!612;UBERON:0004111!1.70e-07!241;UBERON:0002346!3.21e-07!90;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129;UBERON:0002020!4.71e-07!34;UBERON:0003528!4.71e-07!34;UBERON:0001004!5.19e-07!72;UBERON:0003075!5.59e-07!86;UBERON:0007284!5.59e-07!86;UBERON:0003080!7.44e-07!42;UBERON:0000033!7.74e-07!123|ontology_enrichment_uberon_v019=UBERON:0000478;2.00e-09;24!UBERON:0005631;3.21e-09;10!UBERON:0000158;3.21e-09;10!UBERON:0001987;3.07e-08;4!UBERON:0000305;1.07e-07;7!UBERON:0000474;9.07e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.66e-15,14;UBERON:0000158,2.66e-15,14;UBERON:0000478,2.09e-09,24;UBERON:0003124,3.64e-09,7;UBERON:0003975,4.32e-09,22;UBERON:0001987,3.32e-08,4;UBERON:0004340,3.32e-08,4;UBERON:0000995,5.78e-08,21;UBERON:0000305,8.57e-08,7;UBERON:0004175,1.10e-07,25;UBERON:0005795,1.69e-07,22;UBERON:0003100,2.43e-07,41;UBERON:0003134,2.91e-07,37;UBERON:0000474,2.91e-07,37;UBERON:0004871,9.64e-07,8|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,4.18680700783456,4.36882744260345,4.74780560811216,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.458480434487708,0.821005894499457,0.865818594450472,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0.926864265692532,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,1.18306800039844,0.842923450390509,0.482022059766964,2.09558548191549,1.74303555273925,0.474541238222193,1.34831308160164,0.784885860501384,1.15424147083917,0,0,1.2347220339942,1.47008711385542,0,0,0,0,2.7057456479485,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,1.71697232418975,0,0,0,0,0,0,0.358234090811393,0,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,8.32177197552485,3.0239029332968,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0.276242966807689,0.114814448164607,0,0,0,0.924184045252977,0.784349769176855,0,0.105551628892876,0,0,0.863663664408557,0,0.270946437543853,0,1.01950509218015,1.66215201785745,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:16947414..16947446,- | |||
|id=chr11:16947414..16947446,- | |||
|ontology_enrichment_celltype=CL:0000066!7.50e-10!254;CL:0002076!1.97e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.19e-09;19!CL:0000453;6.26e-07;5!CL:0002577;7.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.27e-09,253;CL:0000349,8.25e-09,19;CL:0000453,5.63e-07,5;CL:0002577,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.09e-17!106;DOID:0050687!2.37e-15!143;DOID:299!6.01e-09!25;DOID:1749!2.74e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-12;14!DOID:299;9.28e-09;25!DOID:170;1.31e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.57e-19,106;DOID:0050687,1.12e-15,143;DOID:1749,1.96e-12,14;DOID:299,6.94e-09,25;DOID:162,1.12e-07,235;DOID:170,1.95e-07,6;DOID:14566,2.82e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!4.58e-17!219;UBERON:0007023!2.09e-14!115;UBERON:0000062!1.19e-12!511;UBERON:0004119!4.89e-12!169;UBERON:0000925!4.89e-12!169;UBERON:0006595!4.89e-12!169;UBERON:0000481!2.86e-10!347;UBERON:0001007!7.64e-10!155;UBERON:0001555!7.64e-10!155;UBERON:0007026!7.64e-10!155;UBERON:0000477!9.27e-10!286;UBERON:0001049!3.62e-09!57;UBERON:0005068!3.62e-09!57;UBERON:0006241!3.62e-09!57;UBERON:0007135!3.62e-09!57;UBERON:0004921!6.93e-09!129;UBERON:0004185!6.93e-09!129;UBERON:0000468!1.33e-08!659;UBERON:0000073!2.92e-08!94;UBERON:0001016!2.92e-08!94;UBERON:0000467!2.98e-08!625;UBERON:0005743!3.00e-08!86;UBERON:0000924!3.07e-08!173;UBERON:0006601!3.07e-08!173;UBERON:0000480!3.90e-08!626;UBERON:0000955!4.50e-08!69;UBERON:0006238!4.50e-08!69;UBERON:0001017!5.54e-08!82;UBERON:0004121!5.65e-08!169;UBERON:0000077!5.76e-08!130;UBERON:0002616!1.12e-07!59;UBERON:0000923!1.12e-07!604;UBERON:0005291!1.12e-07!604;UBERON:0006598!1.12e-07!604;UBERON:0002532!1.12e-07!604;UBERON:0002050!1.46e-07!605;UBERON:0005423!1.46e-07!605;UBERON:0000922!1.55e-07!612;UBERON:0004111!1.70e-07!241;UBERON:0002346!3.21e-07!90;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129;UBERON:0002020!4.71e-07!34;UBERON:0003528!4.71e-07!34;UBERON:0001004!5.19e-07!72;UBERON:0003075!5.59e-07!86;UBERON:0007284!5.59e-07!86;UBERON:0003080!7.44e-07!42;UBERON:0000033!7.74e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.00e-09;24!UBERON:0005631;3.21e-09;10!UBERON:0000158;3.21e-09;10!UBERON:0001987;3.07e-08;4!UBERON:0000305;1.07e-07;7!UBERON:0000474;9.07e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.66e-15,14;UBERON:0000158,2.66e-15,14;UBERON:0000478,2.09e-09,24;UBERON:0003124,3.64e-09,7;UBERON:0003975,4.32e-09,22;UBERON:0001987,3.32e-08,4;UBERON:0004340,3.32e-08,4;UBERON:0000995,5.78e-08,21;UBERON:0000305,8.57e-08,7;UBERON:0004175,1.10e-07,25;UBERON:0005795,1.69e-07,22;UBERON:0003100,2.43e-07,41;UBERON:0003134,2.91e-07,37;UBERON:0000474,2.91e-07,37;UBERON:0004871,9.64e-07,8 | |||
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| |||
|short_description=p@chr11:16947414..16947446,- | |||
}} |
Revision as of 16:54, 10 September 2013
Short description: | p@chr11:16947414..16947446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:16947414..16947446, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.27e-09 | 253 |
extraembryonic cell | 8.25e-09 | 19 |
Langerhans cell | 5.63e-07 | 5 |
placental epithelial cell | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.66e-15 | 14 |
membranous layer | 2.66e-15 | 14 |
extraembryonic structure | 2.09e-09 | 24 |
chorion | 3.64e-09 | 7 |
internal female genitalia | 4.32e-09 | 22 |
placenta | 3.32e-08 | 4 |
allantois | 3.32e-08 | 4 |
uterus | 5.78e-08 | 21 |
amnion | 8.57e-08 | 7 |
internal genitalia | 1.10e-07 | 25 |
embryonic uterus | 1.69e-07 | 22 |
female organism | 2.43e-07 | 41 |
female reproductive organ | 2.91e-07 | 37 |
female reproductive system | 2.91e-07 | 37 |
somatic layer of lateral plate mesoderm | 9.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.57e-19 | 106 |
cell type cancer | 1.12e-15 | 143 |
squamous cell carcinoma | 1.96e-12 | 14 |
adenocarcinoma | 6.94e-09 | 25 |
cancer | 1.12e-07 | 235 |
endocrine gland cancer | 1.95e-07 | 6 |
disease of cellular proliferation | 2.82e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.