FFCP PHASE1:Hg19::chr11:114466471..114466474,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23117 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000424261_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_4_at_FAM55D_5end | |||
|id=chr11:114466471..114466474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1!UBERON:0008801;2.05e-29;1!UBERON:0001045;4.20e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!2.42e-50!2;UBERON:0001155!3.18e-44!9;UBERON:0001044!9.19e-38!6;UBERON:0003293!9.19e-38!6;UBERON:0003294!9.19e-38!6;UBERON:0010047!9.19e-38!6;UBERON:0000167!9.19e-38!6;UBERON:0000059!2.58e-36!11;UBERON:0001736!2.78e-26!1;UBERON:0006298!2.78e-26!1;UBERON:0001831!5.93e-26!1;UBERON:0001567!5.93e-26!1;UBERON:0008801!5.93e-26!1;UBERON:0001154!9.79e-26!1;UBERON:0001153!9.79e-26!1;UBERON:0003408!5.13e-23!10;UBERON:0000160!1.27e-14!27;UBERON:0004089!1.07e-13!2;UBERON:0000078!3.93e-13!18;UBERON:0005409!1.78e-11!35;UBERON:0000166!2.34e-11!21;UBERON:0004921!2.27e-09!129;UBERON:0004185!2.27e-09!129;UBERON:0000165!1.11e-08!28;UBERON:0000930!1.11e-08!28;UBERON:0002365!6.69e-08!31;UBERON:0002330!6.69e-08!31;UBERON:0007023!7.59e-08!115;UBERON:0001007!8.55e-08!155;UBERON:0001555!8.55e-08!155;UBERON:0007026!8.55e-08!155;UBERON:0004119!3.84e-07!169;UBERON:0000925!3.84e-07!169;UBERON:0006595!3.84e-07!169;UBERON:0000161!4.58e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.10e-57;2!UBERON:0001155;2.49e-50;9!UBERON:0001044;6.48e-43;6!UBERON:0003293;6.48e-43;6!UBERON:0003294;6.48e-43;6!UBERON:0010047;6.48e-43;6!UBERON:0003408;6.48e-43;6!UBERON:0000167;6.48e-43;6!UBERON:0000059;2.51e-41;11!UBERON:0004921;7.84e-38;33!UBERON:0001736;9.99e-30;1!UBERON:0001831;2.05e-29;1!UBERON:0001567;2.05e-29;1!UBERON:0001154;4.20e-29;1!UBERON:0001153;4.20e-29;1!UBERON:0009854;4.20e-29;1!UBERON:0000160;1.53e-25;17!UBERON:0005409;3.94e-20;22!UBERON:0001041;6.48e-19;14!UBERON:0001555;1.32e-15;54!UBERON:0004089;1.91e-15;2!UBERON:0000161;3.79e-14;19!UBERON:0000166;3.79e-14;19!UBERON:0001007;1.39e-11;81!UBERON:0000165;7.81e-10;28!UBERON:0002365;9.00e-09;31!UBERON:0002330;9.00e-09;31!UBERON:0009856;2.61e-08;4!UBERON:0004907;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.58e-57,2;UBERON:0001155,2.49e-50,9;UBERON:0001044,6.48e-43,6;UBERON:0003293,6.48e-43,6;UBERON:0003294,6.48e-43,6;UBERON:0010047,6.48e-43,6;UBERON:0000167,6.48e-43,6;UBERON:0000059,2.51e-41,11;UBERON:0001736,9.99e-30,1;UBERON:0006298,9.99e-30,1;UBERON:0001831,2.37e-29,1;UBERON:0001567,2.37e-29,1;UBERON:0008801,2.37e-29,1;UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0003408,3.92e-26,10;UBERON:0000160,1.53e-25,17;UBERON:0005409,7.03e-18,25;UBERON:0004089,2.05e-15,2;UBERON:0000166,2.54e-12,22;UBERON:0004921,7.31e-12,118;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000165,1.61e-09,29;UBERON:0000930,1.61e-09,29;UBERON:0007023,3.77e-09,114;UBERON:0002365,6.01e-09,31;UBERON:0002330,6.01e-09,31;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000161,8.54e-08,36;UBERON:0004907,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,2.74218449960351,8.55442202907076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8720462293825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50475140085449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FAM55D | |||
}} |
Revision as of 15:50, 10 September 2013
Short description: | p4@FAM55D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FAM55D_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000424261_5end |
EntrezGene: | FAM55D |
HGNC: | 23117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.58e-57 | 2 |
colon | 2.49e-50 | 9 |
saliva-secreting gland | 6.48e-43 | 6 |
gland of oral region | 6.48e-43 | 6 |
gland of foregut | 6.48e-43 | 6 |
oral gland | 6.48e-43 | 6 |
oral cavity | 6.48e-43 | 6 |
large intestine | 2.51e-41 | 11 |
submandibular gland | 9.99e-30 | 1 |
submandibular gland primordium | 9.99e-30 | 1 |
parotid gland | 2.37e-29 | 1 |
cheek | 2.37e-29 | 1 |
parotid gland primordium | 2.37e-29 | 1 |
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
gland of gut | 3.92e-26 | 10 |
intestine | 1.53e-25 | 17 |
gastrointestinal system | 7.03e-18 | 25 |
midface | 2.05e-15 | 2 |
oral opening | 2.54e-12 | 22 |
subdivision of digestive tract | 7.31e-12 | 118 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
mouth | 1.61e-09 | 29 |
stomodeum | 1.61e-09 | 29 |
adult organism | 3.77e-09 | 114 |
exocrine gland | 6.01e-09 | 31 |
exocrine system | 6.01e-09 | 31 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
orifice | 8.54e-08 | 36 |
lower digestive tract | 6.77e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.