FFCP PHASE1:Hg19::chr10:91295332..91295358,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=387700|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23094|TSSclassifier=S|UniProt=Q6ZSM3,E9PSF9,F5H394|association_with_transcript=-19bp_to_ENST00000341233,ENST00000371790,ENST00000544887,NM_213606,uc001kgm.2_5end|description=CAGE_peak_2_at_SLC16A12_5end|id=chr10:91295332..91295358,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;4.29e-10;3!CL:0000067;4.29e-10;3!CL:0005012;4.29e-10;3!CL:0002304;4.29e-10;3!CL:0000708;1.11e-09;3!CL:0000075;1.71e-08;27!CL:0000306;2.21e-07;4!CL:0002222;2.21e-07;4!CL:0002224;2.21e-07;4!CL:0002549;7.86e-07;2|ontology_enrichment_celltype_v019_2=CL:0000064,4.19e-10,3;CL:0000067,4.19e-10,3;CL:0005012,4.19e-10,3;CL:0002304,4.19e-10,3;CL:0000708,1.12e-09,3;CL:0000075,2.22e-08,27;CL:0000306,2.63e-07,4;CL:0002222,2.63e-07,4;CL:0002224,2.63e-07,4;CL:0002549,6.47e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!2.31e-16!86;UBERON:0007284!2.31e-16!86;UBERON:0002346!5.48e-15!90;UBERON:0007023!9.56e-15!115;UBERON:0001032!8.25e-14!24;UBERON:0004456!8.25e-14!24;UBERON:0003103!2.39e-13!69;UBERON:0000020!6.99e-13!23;UBERON:0002104!1.11e-11!21;UBERON:0000481!1.81e-11!347;UBERON:0000153!2.81e-11!129;UBERON:0007811!2.81e-11!129;UBERON:0002200!4.50e-11!11;UBERON:0006876!4.50e-11!11;UBERON:0000119!5.01e-11!312;UBERON:0004121!7.35e-11!169;UBERON:0007625!7.78e-11!11;UBERON:0000970!9.10e-11!20;UBERON:0005743!2.60e-10!86;UBERON:0000033!3.01e-10!123;UBERON:0000924!3.29e-10!173;UBERON:0006601!3.29e-10!173;UBERON:0000019!3.33e-10!19;UBERON:0000047!3.33e-10!19;UBERON:0004088!3.33e-10!19;UBERON:0003072!3.33e-10!19;UBERON:0003071!3.33e-10!19;UBERON:0004128!3.33e-10!19;UBERON:0000483!1.02e-09!309;UBERON:0000922!1.17e-09!612;UBERON:0000073!1.52e-09!94;UBERON:0001016!1.52e-09!94;UBERON:0003056!2.40e-09!61;UBERON:0000064!7.93e-09!219;UBERON:0001456!8.16e-09!21;UBERON:0000468!1.94e-08!659;UBERON:0001017!2.18e-08!82;UBERON:0002203!4.32e-08!6;UBERON:0001768!4.32e-08!6;UBERON:0000062!5.21e-08!511;UBERON:0000475!5.89e-08!365;UBERON:0001801!6.59e-08!14;UBERON:0002616!9.16e-08!59;UBERON:0003135!1.33e-07!11;UBERON:0000489!2.35e-07!32;UBERON:0002050!2.85e-07!605;UBERON:0005423!2.85e-07!605;UBERON:0001049!5.00e-07!57;UBERON:0005068!5.00e-07!57;UBERON:0006241!5.00e-07!57;UBERON:0007135!5.00e-07!57;UBERON:0000923!5.61e-07!604;UBERON:0005291!5.61e-07!604;UBERON:0006598!5.61e-07!604;UBERON:0002532!5.61e-07!604;UBERON:0000063!9.10e-07!97|ontology_enrichment_uberon_v019=UBERON:0000488;7.97e-13;4!UBERON:0007625;8.42e-13;11!UBERON:0006876;1.13e-12;11!UBERON:0001032;3.70e-10;24!UBERON:0004456;3.70e-10;24!UBERON:0001778;4.29e-10;3!UBERON:0001775;4.29e-10;3!UBERON:0001801;8.68e-10;14!UBERON:0002104;8.75e-10;21!UBERON:0003210;1.11e-09;3!UBERON:0000019;7.10e-09;19!UBERON:0000047;7.10e-09;19!UBERON:0004088;7.10e-09;19!UBERON:0010230;7.10e-09;19!UBERON:0006947;8.43e-09;3!UBERON:0004054;8.43e-09;3!UBERON:0000020;9.04e-09;23!UBERON:0002203;1.64e-08;6!UBERON:0001768;1.64e-08;6!UBERON:0002200;1.64e-08;6!UBERON:0000970;2.36e-08;20!UBERON:0001456;6.99e-08;21!UBERON:0010077;2.21e-07;4!UBERON:0005389;2.21e-07;4!UBERON:0000484;2.21e-07;4!UBERON:0000965;2.21e-07;4!UBERON:0001803;2.21e-07;4!UBERON:0005629;7.86e-07;2!UBERON:0005358;7.86e-07;2!UBERON:0001886;7.86e-07;2!UBERON:0004086;7.86e-07;2!UBERON:0005282;7.86e-07;2!UBERON:0005281;7.86e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003103,5.65e-13,68;UBERON:0000488,8.04e-13,4;UBERON:0007625,9.77e-13,11;UBERON:0006876,1.05e-12,11;UBERON:0000019,2.17e-10,20;UBERON:0000047,2.17e-10,20;UBERON:0010312,2.17e-10,20;UBERON:0004088,2.17e-10,20;UBERON:0010230,2.17e-10,20;UBERON:0003072,2.17e-10,20;UBERON:0004128,2.17e-10,20;UBERON:0003071,2.17e-10,20;UBERON:0000020,3.72e-10,24;UBERON:0001032,3.72e-10,24;UBERON:0004456,3.72e-10,24;UBERON:0001778,4.19e-10,3;UBERON:0001775,4.19e-10,3;UBERON:0000970,8.33e-10,21;UBERON:0002104,8.33e-10,21;UBERON:0001801,9.72e-10,14;UBERON:0003210,1.12e-09,3;UBERON:0001456,2.83e-09,22;UBERON:0006947,6.46e-09,3;UBERON:0004054,6.46e-09,3;UBERON:0002113,1.37e-08,26;UBERON:0003918,1.37e-08,26;UBERON:0011143,1.37e-08,26;UBERON:0005095,1.37e-08,26;UBERON:0007687,1.37e-08,26;UBERON:0002203,1.65e-08,6;UBERON:0001768,1.65e-08,6;UBERON:0002200,1.65e-08,6;UBERON:0000489,2.29e-08,31;UBERON:0003075,2.44e-07,82;UBERON:0007284,2.44e-07,82;UBERON:0010077,2.63e-07,4;UBERON:0005389,2.63e-07,4;UBERON:0000484,2.63e-07,4;UBERON:0002546,2.63e-07,4;UBERON:0000965,2.63e-07,4;UBERON:0001803,2.63e-07,4;UBERON:0003073,2.63e-07,4;UBERON:0005426,2.63e-07,4;UBERON:0006555,3.30e-07,16;UBERON:0004819,3.30e-07,16;UBERON:0005629,6.47e-07,2;UBERON:0005358,6.47e-07,2;UBERON:0001886,6.47e-07,2;UBERON:0004086,6.47e-07,2;UBERON:0005282,6.47e-07,2;UBERON:0005281,6.47e-07,2;UBERON:0002346,8.40e-07,86;UBERON:0005904,8.99e-07,4|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=387700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23094 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZSM3,E9PSF9,F5H394 | |||
|association_with_transcript=-19bp_to_ENST00000341233,ENST00000371790,ENST00000544887,NM_213606,uc001kgm.2_5end | |||
|description=CAGE_peak_2_at_SLC16A12_5end | |||
|id=chr10:91295332..91295358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.29e-10;3!CL:0000067;4.29e-10;3!CL:0005012;4.29e-10;3!CL:0002304;4.29e-10;3!CL:0000708;1.11e-09;3!CL:0000075;1.71e-08;27!CL:0000306;2.21e-07;4!CL:0002222;2.21e-07;4!CL:0002224;2.21e-07;4!CL:0002549;7.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.19e-10,3;CL:0000067,4.19e-10,3;CL:0005012,4.19e-10,3;CL:0002304,4.19e-10,3;CL:0000708,1.12e-09,3;CL:0000075,2.22e-08,27;CL:0000306,2.63e-07,4;CL:0002222,2.63e-07,4;CL:0002224,2.63e-07,4;CL:0002549,6.47e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.31e-16!86;UBERON:0007284!2.31e-16!86;UBERON:0002346!5.48e-15!90;UBERON:0007023!9.56e-15!115;UBERON:0001032!8.25e-14!24;UBERON:0004456!8.25e-14!24;UBERON:0003103!2.39e-13!69;UBERON:0000020!6.99e-13!23;UBERON:0002104!1.11e-11!21;UBERON:0000481!1.81e-11!347;UBERON:0000153!2.81e-11!129;UBERON:0007811!2.81e-11!129;UBERON:0002200!4.50e-11!11;UBERON:0006876!4.50e-11!11;UBERON:0000119!5.01e-11!312;UBERON:0004121!7.35e-11!169;UBERON:0007625!7.78e-11!11;UBERON:0000970!9.10e-11!20;UBERON:0005743!2.60e-10!86;UBERON:0000033!3.01e-10!123;UBERON:0000924!3.29e-10!173;UBERON:0006601!3.29e-10!173;UBERON:0000019!3.33e-10!19;UBERON:0000047!3.33e-10!19;UBERON:0004088!3.33e-10!19;UBERON:0003072!3.33e-10!19;UBERON:0003071!3.33e-10!19;UBERON:0004128!3.33e-10!19;UBERON:0000483!1.02e-09!309;UBERON:0000922!1.17e-09!612;UBERON:0000073!1.52e-09!94;UBERON:0001016!1.52e-09!94;UBERON:0003056!2.40e-09!61;UBERON:0000064!7.93e-09!219;UBERON:0001456!8.16e-09!21;UBERON:0000468!1.94e-08!659;UBERON:0001017!2.18e-08!82;UBERON:0002203!4.32e-08!6;UBERON:0001768!4.32e-08!6;UBERON:0000062!5.21e-08!511;UBERON:0000475!5.89e-08!365;UBERON:0001801!6.59e-08!14;UBERON:0002616!9.16e-08!59;UBERON:0003135!1.33e-07!11;UBERON:0000489!2.35e-07!32;UBERON:0002050!2.85e-07!605;UBERON:0005423!2.85e-07!605;UBERON:0001049!5.00e-07!57;UBERON:0005068!5.00e-07!57;UBERON:0006241!5.00e-07!57;UBERON:0007135!5.00e-07!57;UBERON:0000923!5.61e-07!604;UBERON:0005291!5.61e-07!604;UBERON:0006598!5.61e-07!604;UBERON:0002532!5.61e-07!604;UBERON:0000063!9.10e-07!97 | |||
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|short_description=p2@SLC16A12 | |||
}} |
Revision as of 14:56, 10 September 2013
Short description: | p2@SLC16A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC16A12_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000341233, ENST00000371790, ENST00000544887, NM_213606, uc001kgm.2_5end |
EntrezGene: | SLC16A12 |
HGNC: | 23094 |
UniProt: | Q6ZSM3E9PSF9F5H394 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.19e-10 | 3 |
ciliated epithelial cell | 4.19e-10 | 3 |
multi-ciliated epithelial cell | 4.19e-10 | 3 |
non-pigmented ciliary epithelial cell | 4.19e-10 | 3 |
leptomeningeal cell | 1.12e-09 | 3 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
crystallin accumulating cell | 2.63e-07 | 4 |
vertebrate lens cell | 2.63e-07 | 4 |
lens epithelial cell | 2.63e-07 | 4 |
fibroblast of choroid plexus | 6.47e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.