Personal tools

Coexpression cluster:C1652: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|ontology_enrichment_uberon=UBERON:0001049!4.51e-97!56;UBERON:0005068!4.51e-97!56;UBERON:0006241!4.51e-97!56;UBERON:0007135!4.51e-97!56;UBERON:0000073!2.45e-91!53;UBERON:0002616!2.45e-91!53;UBERON:0003075!1.70e-81!82;UBERON:0007284!1.70e-81!82;UBERON:0001017!4.91e-79!81;UBERON:0002346!5.89e-77!86;UBERON:0000955!9.03e-77!68;UBERON:0006238!9.03e-77!68;UBERON:0002780!2.18e-75!41;UBERON:0001890!2.18e-75!41;UBERON:0003080!2.18e-75!41;UBERON:0006240!2.18e-75!41;UBERON:0001016!1.09e-74!89;UBERON:0001893!7.41e-70!34;UBERON:0003528!1.23e-69!34;UBERON:0002020!1.23e-69!34;UBERON:0003056!4.02e-67!61;UBERON:0001869!1.20e-65!32;UBERON:0002791!1.70e-65!32;UBERON:0010371!8.01e-61!104;UBERON:0000956!2.97e-51!25;UBERON:0000203!2.97e-51!25;UBERON:0010314!4.27e-48!132;UBERON:0002619!8.90e-46!22;UBERON:0007023!2.07e-45!114;UBERON:0004121!3.54e-43!171;UBERON:0000924!3.54e-43!171;UBERON:0006601!3.54e-43!171;UBERON:0001950!1.73e-41!20;UBERON:0011216!2.35e-32!223;UBERON:0000025!5.63e-23!192;UBERON:0003076!1.05e-21!15;UBERON:0003057!1.05e-21!15;UBERON:0002420!1.07e-19!9;UBERON:0007245!1.07e-19!9;UBERON:0010009!1.07e-19!9;UBERON:0010011!1.07e-19!9;UBERON:0000454!1.07e-19!9;UBERON:0000477!1.33e-19!373;UBERON:0004111!1.73e-19!240;UBERON:0000125!2.36e-19!9;UBERON:0002308!2.36e-19!9;UBERON:0000483!3.40e-17!306;UBERON:0000119!7.39e-17!309;UBERON:0000064!1.37e-16!218;UBERON:0004733!1.52e-16!12;UBERON:0002028!1.52e-16!12;UBERON:0007277!1.52e-16!12;UBERON:0009663!2.09e-15!7;UBERON:0004732!4.29e-15!13;UBERON:0000200!4.50e-14!6;UBERON:0000481!1.48e-13!342;UBERON:0002298!2.94e-13!6;UBERON:0000062!5.72e-13!503;UBERON:0001872!1.60e-12!5;UBERON:0000349!3.40e-12!5;UBERON:0002021!3.48e-12!5;UBERON:0001871!5.92e-12!6;UBERON:0002680!2.74e-11!9;UBERON:0001895!2.74e-11!9;UBERON:0010092!2.74e-11!9;UBERON:0002050!6.39e-10!564;UBERON:0000467!1.18e-09!624;UBERON:0000480!1.32e-09!625;UBERON:0000923!1.54e-09!560;UBERON:0010316!1.54e-09!560;UBERON:0005291!1.54e-09!560;UBERON:0006598!1.54e-09!560;UBERON:0010317!1.54e-09!560;UBERON:0002532!1.54e-09!560;UBERON:0000488!3.28e-09!4;UBERON:0000369!3.90e-09!4;UBERON:0002435!3.90e-09!4;UBERON:0000204!3.90e-09!4;UBERON:0010082!3.90e-09!4;UBERON:0005423!5.03e-09!581;UBERON:0000922!5.32e-09!592;UBERON:0000468!9.92e-09!656;UBERON:0001870!7.48e-08!3;UBERON:0000988!8.57e-08!3;UBERON:0001894!8.88e-08!7;UBERON:0006222!8.88e-08!7;UBERON:0001778!9.60e-08!3;UBERON:0001775!9.60e-08!3;UBERON:0001896!3.92e-07!3;UBERON:0005383!3.92e-07!3;UBERON:0005290!3.92e-07!3;UBERON:0005382!3.92e-07!3;UBERON:0010096!3.92e-07!3;UBERON:0002240!6.66e-07!3;UBERON:0005174!6.66e-07!3;UBERON:0001137!6.66e-07!3
|ontology_enrichment_uberon=UBERON:0001049!4.51e-97!56;UBERON:0005068!4.51e-97!56;UBERON:0006241!4.51e-97!56;UBERON:0007135!4.51e-97!56;UBERON:0000073!2.45e-91!53;UBERON:0002616!2.45e-91!53;UBERON:0003075!1.70e-81!82;UBERON:0007284!1.70e-81!82;UBERON:0001017!4.91e-79!81;UBERON:0002346!5.89e-77!86;UBERON:0000955!9.03e-77!68;UBERON:0006238!9.03e-77!68;UBERON:0002780!2.18e-75!41;UBERON:0001890!2.18e-75!41;UBERON:0003080!2.18e-75!41;UBERON:0006240!2.18e-75!41;UBERON:0001016!1.09e-74!89;UBERON:0001893!7.41e-70!34;UBERON:0003528!1.23e-69!34;UBERON:0002020!1.23e-69!34;UBERON:0003056!4.02e-67!61;UBERON:0001869!1.20e-65!32;UBERON:0002791!1.70e-65!32;UBERON:0010371!8.01e-61!104;UBERON:0000956!2.97e-51!25;UBERON:0000203!2.97e-51!25;UBERON:0010314!4.27e-48!132;UBERON:0002619!8.90e-46!22;UBERON:0007023!2.07e-45!114;UBERON:0004121!3.54e-43!171;UBERON:0000924!3.54e-43!171;UBERON:0006601!3.54e-43!171;UBERON:0001950!1.73e-41!20;UBERON:0011216!2.35e-32!223;UBERON:0000025!5.63e-23!192;UBERON:0003076!1.05e-21!15;UBERON:0003057!1.05e-21!15;UBERON:0002420!1.07e-19!9;UBERON:0007245!1.07e-19!9;UBERON:0010009!1.07e-19!9;UBERON:0010011!1.07e-19!9;UBERON:0000454!1.07e-19!9;UBERON:0000477!1.33e-19!373;UBERON:0004111!1.73e-19!240;UBERON:0000125!2.36e-19!9;UBERON:0002308!2.36e-19!9;UBERON:0000483!3.40e-17!306;UBERON:0000119!7.39e-17!309;UBERON:0000064!1.37e-16!218;UBERON:0004733!1.52e-16!12;UBERON:0002028!1.52e-16!12;UBERON:0007277!1.52e-16!12;UBERON:0009663!2.09e-15!7;UBERON:0004732!4.29e-15!13;UBERON:0000200!4.50e-14!6;UBERON:0000481!1.48e-13!342;UBERON:0002298!2.94e-13!6;UBERON:0000062!5.72e-13!503;UBERON:0001872!1.60e-12!5;UBERON:0000349!3.40e-12!5;UBERON:0002021!3.48e-12!5;UBERON:0001871!5.92e-12!6;UBERON:0002680!2.74e-11!9;UBERON:0001895!2.74e-11!9;UBERON:0010092!2.74e-11!9;UBERON:0002050!6.39e-10!564;UBERON:0000467!1.18e-09!624;UBERON:0000480!1.32e-09!625;UBERON:0000923!1.54e-09!560;UBERON:0010316!1.54e-09!560;UBERON:0005291!1.54e-09!560;UBERON:0006598!1.54e-09!560;UBERON:0010317!1.54e-09!560;UBERON:0002532!1.54e-09!560;UBERON:0000488!3.28e-09!4;UBERON:0000369!3.90e-09!4;UBERON:0002435!3.90e-09!4;UBERON:0000204!3.90e-09!4;UBERON:0010082!3.90e-09!4;UBERON:0005423!5.03e-09!581;UBERON:0000922!5.32e-09!592;UBERON:0000468!9.92e-09!656;UBERON:0001870!7.48e-08!3;UBERON:0000988!8.57e-08!3;UBERON:0001894!8.88e-08!7;UBERON:0006222!8.88e-08!7;UBERON:0001778!9.60e-08!3;UBERON:0001775!9.60e-08!3;UBERON:0001896!3.92e-07!3;UBERON:0005383!3.92e-07!3;UBERON:0005290!3.92e-07!3;UBERON:0005382!3.92e-07!3;UBERON:0010096!3.92e-07!3;UBERON:0002240!6.66e-07!3;UBERON:0005174!6.66e-07!3;UBERON:0001137!6.66e-07!3
|tfbs_overrepresentation=0.23317,0.0958562,0.0624685,0.078254,0.310241,0.43203,0.0706464,0.5903,0.0539364,0.0424746,0.221396,0.346629,0.294377,0.201017,0.235304,0.101024,0.223746,0.158251,0.0865245,0.173528,0.000465316,0.211047,0.13286,0.153106,0.0683222,0.332688,0.324018,0.146582,0.227906,0.150721,0.31768,0.182756,0.0298713,0.322378,0.108398,0.136785,0.0475906,0.070583,0.192426,0.108683,0.155571,0.0406818,0.222325,2.81371e-05,0.193292,0.0596699,0.0625547,0.0447422,0.178503,0.193726,0.243359,0.000124408,0.114185,0.150136,0.308837,0.0632035,0.172598,0.328738,0.127101,0.169687,0.0485674,0.236408,0.174369,0.123348,0.0892839,0.0827236,0.515105,0.0980005,0.139298,0.262613,0.547889,0.110232,0.143944,0.0195154,0.012429,0.0283664,0.155593,0.0717582,0.0613084,0.0120583,0.154245,0.348799,0.0698251,0.183986,0.436695,0.38341,0.104918,0.323505,0.46357,0.102375,0.138802,0.0812726,0.153861,0.0777027,0.138224,0.184264,0.0613695,0.242703,0.0006303,0.413729,0.0939617,0.416542,0.225088,0.0610111,0.337778,0.0672793,0.109136,0.497282,0.228612,0.097251,0.0452737,0.0560173,0.23661,0.0293017,0.162943,0.00157623,0.0336673,0.0926302,0.00214876,0.13579,0.0378196,0.331577,0.222452,0.138843,0.164723,0.0425308,0.000588944,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,0.200735,0.173595,0.105753,0.0905147,0.0544577,0.0065834,0.037671,0.203496,0.316207,0.0331631,0.194394,0.112838,0.159217,1.71411e-05,0.0640569,0.193163,0.311509,0.227801,0.282656,0.0439093,0.070163,0.188135,0.121467,0.350865,0.0846706,0.0555742,8.64038e-05,0.153706,0.186743,0.23397,0.412853,0.183121,0.0022157,0.203135,0.0663482,0.129698,0.281162,0.218835,0.646289,0.0885874,0.129639,0.145577,0.22277,0.284267,0.00459273,0.0586816,0.250461,0.195671,0.0452583,0.185103,0.11983,0.019342,0.286036,0.0660586,0.134265,0.040954,0.172119,0.292239,0.196376,0.351465,0.18064,0.0772176,0.126988,0.0984435,0.110187,0.176022,0.144361,0.0986228,0.0508565,0.0989516,0.21691,0.0903603,0.412989,0.240045,0.319604,0.279218,0.0752697,0.167805,0.193654,0.180992,0.464566,0.265567,0.0367027,0.162511,0.102771,0.165687,0.225173,0.540012,0.246322,0.253699,0.120044,0.201982,0.220536,0.139142,0.0987108,0.09782,0.410084,0.554981,0.0687568,0.124225,0.1547,0.150448,0.0774663,0.398789,0.257365,0.331711,0.285222,0.161173,0.158559,0.134615,0.186192,0.217494,0.132125,0.179065,0.540443,0.187334,0.250769,0.289141,0.0468257,0.157983,0.158078,0.251693,0.172268,0.313249,0.113261,0.180042,0.101058,0.0043351,0.25718,0.204241,0.0568578,0.131428,0.131579,0.148683,0.188945,0.00785145,0.419402,0.00552332,0.387442,0.0778535,0.14011,0.0626022,0.00175995,0.769028,0.000316841,0.252309,0.814323,0.0514824,0.552405,0.000567099,0.493893,0.000325206,0.396701,0.626645,0.0445658,0.127393,0.105065,0.0305032,0.205616,0.486439,0.0406603,0.0233572,0.410803,0.114025,0.579996,0.569955,0.000770311,0.780281,0.292173,0.000131584,0.284119,0.601223,0.176507,0.488132,0.336705,0.237849,0.187073,0.645432,0.252893,0.0384969,0.126184,0.537972,4.20428e-05,0.100468,0.00159767,0.417358,0.0229889,0.299354,0.470142,0.344006,0.00689628,0.45566,0.426591,0.467379,0.762263,0.437202,0.0184191,0.000710991,0.227062,0.438692,0.660225,0.0169193,0.0446353,0.762222,0.20757,0.285074,0.018127,4.70832e-05,0.668275,0.0173305,0.362164,0.289863,0.158786,0.721501,0.00211301,0.80581,0.030851,0.699429,0.1272,0.379008,0.423719,0.000122763,0.256985,0.109234,0.11883,0.0463546,0.779806,0.0956851,0.000771823,0.588284,0.553251,0.0450335,0.00255603,0.628596,0.337121,0.130279,0.861932,0.0740433,0.121457,0.351733,0.0329394,0.436555,0.0306015,0.115972,0.503865,0.0243803,0.43388,0.483295,0.300529,0.418989,0.517568,0.239606,8.71656e-05,0.495024,0.307173,0.246694,0.165722,0.000368359,0.300406,0.597346,0.122916,8.63766e-06,0.493489,0.229501,0.230597,0.555864,0.00857246,0.627794,0.274083,0.383956,0.241286,0.0764074,2.47979e-07,0.393543,0.214395,0.158849,0.00237667,0.115205,0.019185,0.504398,0.125252,0.455709,0.199515,0.00688487,0.127822,0.427794,0.398041,0.0395012,0.347879,0.58021,3.43347e-09,0.174576,0.000734469,0.0100932,0.319495,0.711229,0.827435,0.616333,0.407113,0.498776,0.00258246,0.423517,0.224914,0.0197816,0.0359783,0.251608,0.365107,0.182645,0.0727259,0.295455,0.144104,0.0972855,0.0374096,0.80526,0.508875,0.0423027,0.00626958,0.00492798,0.0117597,0.508758,0.0870485,0.469232,7.98844e-06,3.20992e-06,0.299839,0.126587,0.000149367,0.22877,0.343849,0.315824,0.0174917,0.621499,0.0498759,0.179502,0.43406,0.0715061,0.122699,0.201779,0.214491,0.171725,0.412647,0.102448,0.00909741,0.029672,0.453305,0.00241863,0.561724,0.0762646,0.266371,0.183582,0.168118,0.145381,0.140277,0.251925,0.172066,0.0720324,0.00647589,0.19738,0.205854,0.32541,0.301472,0.507714,0.0818982,0.134306,0.108669,0.284804,0.178494,0.00862948,0.146979,0.304235,0.0238916,0.294266,1.78974e-06,0.0541661,0.580279,0.0223257,0.275452,0.288155,0.265827,0.141761,0.153627,0.0186891,0.000923157,0.171961,0.415228,0.00800917,0.272406,0.00224874,0.327153,0.0496113,0.20949,0.00273935,0.0857377,0.00742545,0.24204,0.129414,0.157037,0.252398,0.197279,0.146467,0.0912686,0.425114,0.7034,0.218241,0.0242146,0.10708,0.327369,0.339826,0.12998,0.123097,0.254847,0.300809,0.0898207,0.126545,0.0918749,0.0686325,0.0569043,0.0639461,0.387306,0.267408,0.312064,0.080156,0.274185,0.00801795,0.0545112,0.510703,0.33844,0.0649137,0.0974216,0.0638093,0.195675,0.174786,0.176557,0.396547,0.0472148,0.383224,0.229138,0.0639045,0.141461,0.0900204,0.0283292,0.385962,0.334921,0.296227,0.208788,0.566117,0.36304,0.000297633,0.123626,0.270619,0.132705,0.285556,0.493429,0.233835,0.224471,0.262929,0.223204,0.143824,0.460679,0.431098,0.0775891,0.153079,0.257945,0.211515,0.125701,0.175283,0.204954,0.209341,0.576888,0.629422,0.084895,0.160115,0.0819954,0.10091,0.122658,0.151161,0.228398,0.056055,0.120552,0.41771,0.189229,0.529713,0.335207,0.434016,0.190688,0.299739,0.278645,0.000447255,0.0940982,0.0780533,0.564811,0.0993772,0.0417776,0.448923,0.11602,0.00918172,0.436413,0.0585992,0.20045,0.274438,0.220769,0.00764505,0.319826,0.000851965,0.173868,0.109708,0.174594,0.0809806,0.154589,0.318794,0.122767,0.0749261,0.176858,0.114361,0.347759,0.242462,0.0620267,0.211111,0.0738743,0.0882327,0.183058,0.150073,0.0404257,0.16872,0.341388,0.0934526,0.359135,0.123404,0.430769,0.240825,3.80661e-05,0.336623,0.163542,0.483244,0.27134,0.500871,0.239667,0.10226,0.29809,0.235147,0.689826,0.245965,0.116923,0.148426,0.0983658,0.228743,0.238223,0.156976,0.244789,0.267391,0.00589379,0.21807,0.350528,0.00154269,0.432408,0.190404,0.135865,0.488841,0.18137,0.180609,0.291283,0.273972,0.153023,0.400137,0.37958,0.22307,0.160699,0.0891264,0.166736,0.181253,0.0422294,0.263877,0.146486,0.769574,0.262486,0.294204,0.131936,2.8888e-05,0.0332739,0.463617,0.119485,0.0965376,0.377203,0.279263,0.336564,0.0720023,0.581771,0.219806,0.0594155,0.587524,0.208795,0.0713793,0.212621,0.594469,0.53612,0.261842,0.581874,0.355154,0.377285,0.0169199,0.537088,0.603804,0.000572292,0.306963,0.569605,0.526495,0.580285,0.550495,0.000754989,0.820986,0.0156811,0.629179,0.561689,0.00104144,0.00125038,7.16342e-05,0.127834,0.270403,0.131557,0.349068,0.70429,0.798758,0.557035,0.427789,0.689998,0.737642,0.371114,0.433702,0.258394,0.000710271,0.432123,0.172498,0.09639,0.494975,0.0224281,1.38264e-05,0.0181413,0.371758,0.00428258,0.562417,0.025506,0.300573,0.254547,0.0309722,0.00855097,0.1082,0.133485,0.183869,0.00134841,0.660884,0.0157148,0.401389,0.705225,0.315485,0.311289,0.000664941,0.0226885,0.389888,0.603509,0.0008676,0.553178,0.246387,0.224252,0.587237,0.155054,0.0260973,0.166402,0.257848,0.353942,0.192234,0.427276,0.747776,0.466967,0.283682,0.424668,4.68516e-07,0.474058,0.583101,0.702164,0.477016,0.530902,0.152704,0.0221009,0.197115,0.127604,0.932831,0.139363,0.34194,0.0625602,0.592314,0.27725,0.0254154,0.0587619,0.317485,1.16004e-06,0.220564,0.0413332,0.262394,0.307462,0.135076,0.469588,0.664443,0.274593,0.490712,0.541363,4.53691e-05,0.583627,0.531474,0.0406675,0.0512684,0.528646,0.361524,0.31558,0.412744,0.54408,1.00457e-06,0.513592,0.0173299,0.0918421,0.45585,0.36864,0.538745,0.0241542,0.453004,0.680686,0.557093,0.693441,0.382214,0.048225,0.000659535,0.000216954,0.339393,0.0325448,0.306231,0.298354,0.0214465,0.0701109,0.00360114,0.0851712,0.426239,0.162155,0.289012,0.0549063,0.412586,0.178696,0.41502,0.0487429,0.294859,0.523749,0.499347,0.307426,0.000221754,0.557732,0.0310988,0.714189,0.0225451,0.813041,5.0121e-05,0.276338,0.126433,0.0176264,0.0570477,0.0555558,0.000475883,0.393022,8.98735e-08,0.116969,0.401231,3.02909e-08,0.297663,0.000254861,0.338258,0.322052,0.145568,0.153833,0.261242,0.00156127,1.31049e-08,0.00164979,5.29022e-05,0.0780866,0.280757,0.050816,0.340343,0.00093263,0.501812,0.462092,0.00846526,0.308589,0.291523,0.19697,0.309816,0.00146994,0.15063,0.198077,0.281455,0.069449,0.419895,0.138495,0.208834,0.32256,0.377566,0.342366,0.109684,0.000704681,0.00197084,5.68657e-05,0.230841,0.00989741,0.255358,0.351665,0.265112,0.0633313,0.10772,0.0854747,0.0747609,0.0968383,0.312881,0.0063138,0.244656,7.29285e-05,0.158985,0.174153,0.0972854,0.333309,0.249919,0.339517,0.00604041,0.198326,0.394084,0.00363093,0.282501,0.00328682,0.000165514,0.00274742,0.000834518,0.197875,0.287909,0.289389,0.00720538,0.392533,0.396962,0.316002,0.330317,0.000691958,0.225079,0.00583612,7.40259e-07,0.185715,0.000960724,0.00140931,0.0407047,0.311201,0.221943,0.306427,0.367733,0.246925,0.208775,0.0886961,0.343014,0.270094,0.276922,0.0129027,0.0067183,0.461742,0.10563,0.336468,0.13327,0.313545,0.17149,0.0877361,0.0880065,0.238969,0.126615,0.0669467,0.0879453,0.474066,0.396935,0.326779,0.292869,0.358198,0.29552,0.131776,0.158116,0.104606,0.194814,0.00020432,0.168186,0.108081,0.123829,0.205215,0.175247,0.0724304,0.109077,0.144842,0.0604892,0.0248943,0.316879,0.442567,0.109896,0.159424,0.224871,0.00186755,9.10781e-07,0.000594394,0.349611,0.0221952,0.385709,0.000363136,0.426488,0.0152991,0.209809,0.253154,0.0575641,0.309489,2.75101e-05,0.362154,0.480785,0.185476,0.000849692,0.344469,0.184651,0.000533738,0.297596,0.42392,0.000277135,0.380826,0.0368957,0.345068,0.151046,0.0047298,0.0687784,0.321735,0.15463,0.13907,0.00410146,0.269432,0.250466,0.0986342,0.115686,0.408975,0.162633,0.342661,0.27567,0.248127,0.33299,0.000150627,0.319112,0.000128284
|tfbs_overrepresentation=0.23317,0.0958562,0.0624685,0.078254,0.310241,0.43203,0.0706464,0.5903,0.0539364,0.0424746,0.221396,0.346629,0.294377,0.201017,0.235304,0.101024,0.223746,0.158251,0.0865245,0.173528,0.000465316,0.211047,0.13286,0.153106,0.0683222,0.332688,0.324018,0.146582,0.227906,0.150721,0.31768,0.182756,0.0298713,0.322378,0.108398,0.136785,0.0475906,0.070583,0.192426,0.108683,0.155571,0.0406818,0.222325,2.81371e-05,0.193292,0.0596699,0.0625547,0.0447422,0.178503,0.193726,0.243359,0.000124408,0.114185,0.150136,0.308837,0.0632035,0.172598,0.328738,0.127101,0.169687,0.0485674,0.236408,0.174369,0.123348,0.0892839,0.0827236,0.515105,0.0980005,0.139298,0.262613,0.547889,0.110232,0.143944,0.0195154,0.012429,0.0283664,0.155593,0.0717582,0.0613084,0.0120583,0.154245,0.348799,0.0698251,0.183986,0.436695,0.38341,0.104918,0.323505,0.46357,0.102375,0.138802,0.0812726,0.153861,0.0777027,0.138224,0.184264,0.0613695,0.242703,0.0006303,0.413729,0.0939617,0.416542,0.225088,0.0610111,0.337778,0.0672793,0.109136,0.497282,0.228612,0.097251,0.0452737,0.0560173,0.23661,0.0293017,0.162943,0.00157623,0.0336673,0.0926302,0.00214876,0.13579,0.0378196,0.331577,0.222452,0.138843,0.164723,0.0425308,0.000588944,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,0.200735,0.173595,0.105753,0.0905147,0.0544577,0.0065834,0.037671,0.203496,0.316207,0.0331631,0.194394,0.112838,0.159217,1.71411e-05,0.0640569,0.193163,0.311509,0.227801,0.282656,0.0439093,0.070163,0.188135,0.121467,0.350865,0.0846706,0.0555742,8.64038e-05,0.153706,0.186743,0.23397,0.412853,0.183121,0.0022157,0.203135,0.0663482,0.129698,0.281162,0.218835,0.646289,0.0885874,0.129639,0.145577,0.22277,0.284267,0.00459273,0.0586816,0.250461,0.195671,0.0452583,0.185103,0.11983,0.019342,0.286036,0.0660586,0.134265,0.040954,0.172119,0.292239,0.196376,0.351465,0.18064,0.0772176,0.126988,0.0984435,0.110187,0.176022,0.144361,0.0986228,0.0508565,0.0989516,0.21691,0.0903603,0.412989,0.240045,0.319604,0.279218,0.0752697,0.167805,0.193654,0.180992,0.464566,0.265567,0.0367027,0.162511,0.102771,0.165687,0.225173,0.540012,0.246322,0.253699,0.120044,0.201982,0.220536,0.139142,0.0987108,0.09782,0.410084,0.554981,0.0687568,0.124225,0.1547,0.150448,0.0774663,0.398789,0.257365,0.331711,0.285222,0.161173,0.158559,0.134615,0.186192,0.217494,0.132125,0.179065,0.540443,0.187334,0.250769,0.289141,0.0468257,0.157983,0.158078,0.251693,0.172268,0.313249,0.113261,0.180042,0.101058,0.0043351,0.25718,0.204241,0.0568578,0.131428,0.131579,0.148683,0.188945,0.00785145,0.419402,0.00552332,0.387442,0.0778535,0.14011,0.0626022,0.00175995,0.769028,0.000316841,0.252309,0.814323,0.0514824,0.552405,0.000567099,0.493893,0.000325206,0.396701,0.626645,0.0445658,0.127393,0.105065,0.0305032,0.205616,0.486439,0.0406603,0.0233572,0.410803,0.114025,0.579996,0.569955,0.000770311,0.780281,0.292173,0.000131584,0.284119,0.601223,0.176507,0.488132,0.336705,0.237849,0.187073,0.645432,0.252893,0.0384969,0.126184,0.537972,4.20428e-05,0.100468,0.00159767,0.417358,0.0229889,0.299354,0.470142,0.344006,0.00689628,0.45566,0.426591,0.467379,0.762263,0.437202,0.0184191,0.000710991,0.227062,0.438692,0.660225,0.0169193,0.0446353,0.762222,0.20757,0.285074,0.018127,4.70832e-05,0.668275,0.0173305,0.362164,0.289863,0.158786,0.721501,0.00211301,0.80581,0.030851,0.699429,0.1272,0.379008,0.423719,0.000122763,0.256985,0.109234,0.11883,0.0463546,0.779806,0.0956851,0.000771823,0.588284,0.553251,0.0450335,0.00255603,0.628596,0.337121,0.130279,0.861932,0.0740433,0.121457,0.351733,0.0329394,0.436555,0.0306015,0.115972,0.503865,0.0243803,0.43388,0.483295,0.300529,0.418989,0.517568,0.239606,8.71656e-05,0.495024,0.307173,0.246694,0.165722,0.000368359,0.300406,0.597346,0.122916,8.63766e-06,0.493489,0.229501,0.230597,0.555864,0.00857246,0.627794,0.274083,0.383956,0.241286,0.0764074,2.47979e-07,0.393543,0.214395,0.158849,0.00237667,0.115205,0.019185,0.504398,0.125252,0.455709,0.199515,0.00688487,0.127822,0.427794,0.398041,0.0395012,0.347879,0.58021,3.43347e-09,0.174576,0.000734469,0.0100932,0.319495,0.711229,0.827435,0.616333,0.407113,0.498776,0.00258246,0.423517,0.224914,0.0197816,0.0359783,0.251608,0.365107,0.182645,0.0727259,0.295455,0.144104,0.0972855,0.0374096,0.80526,0.508875,0.0423027,0.00626958,0.00492798,0.0117597,0.508758,0.0870485,0.469232,7.98844e-06,3.20992e-06,0.299839,0.126587,0.000149367,0.22877,0.343849,0.315824,0.0174917,0.621499,0.0498759,0.179502,0.43406,0.0715061,0.122699,0.201779,0.214491,0.171725,0.412647,0.102448,0.00909741,0.029672,0.453305,0.00241863,0.561724,0.0762646,0.266371,0.183582,0.168118,0.145381,0.140277,0.251925,0.172066,0.0720324,0.00647589,0.19738,0.205854,0.32541,0.301472,0.507714,0.0818982,0.134306,0.108669,0.284804,0.178494,0.00862948,0.146979,0.304235,0.0238916,0.294266,1.78974e-06,0.0541661,0.580279,0.0223257,0.275452,0.288155,0.265827,0.141761,0.153627,0.0186891,0.000923157,0.171961,0.415228,0.00800917,0.272406,0.00224874,0.327153,0.0496113,0.20949,0.00273935,0.0857377,0.00742545,0.24204,0.129414,0.157037,0.252398,0.197279,0.146467,0.0912686,0.425114,0.7034,0.218241,0.0242146,0.10708,0.327369,0.339826,0.12998,0.123097,0.254847,0.300809,0.0898207,0.126545,0.0918749,0.0686325,0.0569043,0.0639461,0.387306,0.267408,0.312064,0.080156,0.274185,0.00801795,0.0545112,0.510703,0.33844,0.0649137,0.0974216,0.0638093,0.195675,0.174786,0.176557,0.396547,0.0472148,0.383224,0.229138,0.0639045,0.141461,0.0900204,0.0283292,0.385962,0.334921,0.296227,0.208788,0.566117,0.36304,0.000297633,0.123626,0.270619,0.132705,0.285556,0.493429,0.233835,0.224471,0.262929,0.223204,0.143824,0.460679,0.431098,0.0775891,0.153079,0.257945,0.211515,0.125701,0.175283,0.204954,0.209341,0.576888,0.629422,0.084895,0.160115,0.0819954,0.10091,0.122658,0.151161,0.228398,0.056055,0.120552,0.41771,0.189229,0.529713,0.335207,0.434016,0.190688,0.299739,0.278645,0.000447255,0.0940982,0.0780533,0.564811,0.0993772,0.0417776,0.448923,0.11602,0.00918172,0.436413,0.0585992,0.20045,0.274438,0.220769,0.00764505,0.319826,0.000851965,0.173868,0.109708,0.174594,0.0809806,0.154589,0.318794,0.122767,0.0749261,0.176858,0.114361,0.347759,0.242462,0.0620267,0.211111,0.0738743,0.0882327,0.183058,0.150073,0.0404257,0.16872,0.341388,0.0934526,0.359135,0.123404,0.430769,0.240825,3.80661e-05,0.336623,0.163542,0.483244,0.27134,0.500871,0.239667,0.10226,0.29809,0.235147,0.689826,0.245965,0.116923,0.148426,0.0983658,0.228743,0.238223,0.156976,0.244789,0.267391,0.00589379,0.21807,0.350528,0.00154269,0.432408,0.190404,0.135865,0.488841,0.18137,0.180609,0.291283,0.273972,0.153023,0.400137,0.37958,0.22307,0.160699,0.0891264,0.166736,0.181253,0.0422294,0.263877,0.146486,0.769574,0.262486,0.294204,0.131936,2.8888e-05,0.0332739,0.463617,0.119485,0.0965376,0.377203,0.279263,0.336564,0.0720023,0.581771,0.219806,0.0594155,0.587524,0.208795,0.0713793,0.212621,0.594469,0.53612,0.261842,0.581874,0.355154,0.377285,0.0169199,0.537088,0.603804,0.000572292,0.306963,0.569605,0.526495,0.580285,0.550495,0.000754989,0.820986,0.0156811,0.629179,0.561689,0.00104144,0.00125038,7.16342e-05,0.127834,0.270403,0.131557,0.349068,0.70429,0.798758,0.557035,0.427789,0.689998,0.737642,0.371114,0.433702,0.258394,0.000710271,0.432123,0.172498,0.09639,0.494975,0.0224281,1.38264e-05,0.0181413,0.371758,0.00428258,0.562417,0.025506,0.300573,0.254547,0.0309722,0.00855097,0.1082,0.133485,0.183869,0.00134841,0.660884,0.0157148,0.401389,0.705225,0.315485,0.311289,0.000664941,0.0226885,0.389888,0.603509,0.0008676,0.553178,0.246387,0.224252,0.587237,0.155054,0.0260973,0.166402,0.257848,0.353942,0.192234,0.427276,0.747776,0.466967,0.283682,0.424668,4.68516e-07,0.474058,0.583101,0.702164,0.477016,0.530902,0.152704,0.0221009,0.197115,0.127604,0.932831,0.139363,0.34194,0.0625602,0.592314,0.27725,0.0254154,0.0587619,0.317485,1.16004e-06,0.220564,0.0413332,0.262394,0.307462,0.135076,0.469588,0.664443,0.274593,0.490712,0.541363,4.53691e-05,0.583627,0.531474,0.0406675,0.0512684,0.528646,0.361524,0.31558,0.412744,0.54408,1.00457e-06,0.513592,0.0173299,0.0918421,0.45585,0.36864,0.538745,0.0241542,0.453004,0.680686,0.557093,0.693441,0.382214,0.048225,0.000659535,0.000216954,0.339393,0.0325448,0.306231,0.298354,0.0214465,0.0701109,0.00360114,0.0851712,0.426239,0.162155,0.289012,0.0549063,0.412586,0.178696,0.41502,0.0487429,0.294859,0.523749,0.499347,0.307426,0.000221754,0.557732,0.0310988,0.714189,0.0225451,0.813041,5.0121e-05,0.276338,0.126433,0.0176264,0.0570477,0.0555558,0.000475883,0.393022,8.98735e-08,0.116969,0.401231,3.02909e-08,0.297663,0.000254861,0.338258,0.322052,0.145568,0.153833,0.261242,0.00156127,1.31049e-08,0.00164979,5.29022e-05,0.0780866,0.280757,0.050816,0.340343,0.00093263,0.501812,0.462092,0.00846526,0.308589,0.291523,0.19697,0.309816,0.00146994,0.15063,0.198077,0.281455,0.069449,0.419895,0.138495,0.208834,0.32256,0.377566,0.342366,0.109684,0.000704681,0.00197084,5.68657e-05,0.230841,0.00989741,0.255358,0.351665,0.265112,0.0633313,0.10772,0.0854747,0.0747609,0.0968383,0.312881,0.0063138,0.244656,7.29285e-05,0.158985,0.174153,0.0972854,0.333309,0.249919,0.339517,0.00604041,0.198326,0.394084,0.00363093,0.282501,0.00328682,0.000165514,0.00274742,0.000834518,0.197875,0.287909,0.289389,0.00720538,0.392533,0.396962,0.316002,0.330317,0.000691958,0.225079,0.00583612,7.40259e-07,0.185715,0.000960724,0.00140931,0.0407047,0.311201,0.221943,0.306427,0.367733,0.246925,0.208775,0.0886961,0.343014,0.270094,0.276922,0.0129027,0.0067183,0.461742,0.10563,0.336468,0.13327,0.313545,0.17149,0.0877361,0.0880065,0.238969,0.126615,0.0669467,0.0879453,0.474066,0.396935,0.326779,0.292869,0.358198,0.29552,0.131776,0.158116,0.104606,0.194814,0.00020432,0.168186,0.108081,0.123829,0.205215,0.175247,0.0724304,0.109077,0.144842,0.0604892,0.0248943,0.316879,0.442567,0.109896,0.159424,0.224871,0.00186755,9.10781e-07,0.000594394,0.349611,0.0221952,0.385709,0.000363136,0.426488,0.0152991,0.209809,0.253154,0.0575641,0.309489,2.75101e-05,0.362154,0.480785,0.185476,0.000849692,0.344469,0.184651,0.000533738,0.297596,0.42392,0.000277135,0.380826,0.0368957,0.345068,0.151046,0.0047298,0.0687784,0.321735,0.15463,0.13907,0.00410146,0.269432,0.250466,0.0986342,0.115686,0.408975,0.162633,0.342661,0.27567,0.248127,0.33299,0.000150627,0.319112,0.000128284
|tfbs_overrepresentation_for_novel_motifs=0.508327,0.0561813,0.500341,0.654974,1.15291,0.653236,0.733342,0.866061,0.321368,3.71916,0.621241,0.778743,1.37937,0.721271,0.453496,1.20439,0.963929,1.02276,0.287891,0.501863,0.500405,0.384437,0.645033,1.14094,0.549618,0.802434,0.700122,0.642741,1.16016,0.233785,0.598009,1.00172,0.359091,0.27659,0.417272,0.0526856,0.413782,0.654459,0.388123,0.301779,1.06799,0.580638,0.132849,0.451846,0.218848,1.32072,0.734485,0.609718,0.124583,0.458489,0.817229,0.746838,1.67994,1.08035,1.2359,0.724351,1.17039,0.689906,0.233662,0.688844,1.04369,0.736968,0.321912,0.935408,0.755773,2.08177,1.32544,1.69665,0.991065,1.53343,0.566575,0.330474,1.05625,1.23387,0.741483,0.709554,0.675933,0.917983,0.987729,0.543014,0.293154,0.934302,0.755403,1.57121,1.18161,0.0719601,0.166306,0.228496,0.844289,1.79645,1.41984,1.15413,1.01895,0.367039,0.455791,0.381528,0.28626,1.06255,0.849074,0.211081,0.389604,1.01316,1.05685,0.967698,0.88799,0.616433,0.951411,0.717647,1.35434,0.437618,0.512457,1.05402,0.494368,0.631235,1.37132,0.412056,0.597842,2.47721,0.897476,0.370186,1.22546,0.841768,0.650322,0.767198,1.48307,0.918767,0.72668,1.02407,1.2687,0.382577,1.15483,0.601055,1.28328,0.763715,1.43285,0.221105,0.591636,1.55197,1.38998,2.25246,1.84906,1.35224,0.728494,1.05895,0.889806,0.680988,0.87256,2.09294,0.577088,0.363423,0.177807,0.126633,1.15522,0.312599,0.736459,1.56426,0.827475,0.439798,0.54968,0.518696,1.35101,1.13636,0.98692,0.522159,0.906429,0.754576,0.35004,2.90914,0.233587
}}
}}

Revision as of 15:01, 26 November 2012


Full id: C1652_normal_brain_cerebellum_occipital_postcentral_temporal_amygdala



Phase1 CAGE Peaks

Hg19::chr12:101188502..101188513,+p13@ANO4
Hg19::chr12:101188514..101188532,+p8@ANO4
Hg19::chr12:101188547..101188565,+p5@ANO4
Hg19::chr12:101188608..101188621,+p7@ANO4
Hg19::chr5:137774709..137774806,+p1@REEP2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
neural tube4.51e-9756
neural rod4.51e-9756
future spinal cord4.51e-9756
neural keel4.51e-9756
regional part of nervous system2.45e-9153
regional part of brain2.45e-9153
neural plate1.70e-8182
presumptive neural plate1.70e-8182
central nervous system4.91e-7981
neurectoderm5.89e-7786
brain9.03e-7768
future brain9.03e-7768
regional part of forebrain2.18e-7541
forebrain2.18e-7541
anterior neural tube2.18e-7541
future forebrain2.18e-7541
nervous system1.09e-7489
telencephalon7.41e-7034
brain grey matter1.23e-6934
gray matter1.23e-6934
pre-chordal neural plate4.02e-6761
cerebral hemisphere1.20e-6532
regional part of telencephalon1.70e-6532
ecto-epithelium8.01e-61104
cerebral cortex2.97e-5125
pallium2.97e-5125
structure with developmental contribution from neural crest4.27e-48132
regional part of cerebral cortex8.90e-4622
adult organism2.07e-45114
ectoderm-derived structure3.54e-43171
ectoderm3.54e-43171
presumptive ectoderm3.54e-43171
neocortex1.73e-4120
organ system subdivision2.35e-32223
tube5.63e-23192
posterior neural tube1.05e-2115
chordal neural plate1.05e-2115
basal ganglion1.07e-199
nuclear complex of neuraxis1.07e-199
aggregate regional part of brain1.07e-199
collection of basal ganglia1.07e-199
cerebral subcortex1.07e-199
anatomical cluster1.33e-19373
anatomical conduit1.73e-19240
neural nucleus2.36e-199
nucleus of brain2.36e-199
epithelium3.40e-17306
cell layer7.39e-17309
organ part1.37e-16218
segmental subdivision of hindbrain1.52e-1612
hindbrain1.52e-1612
presumptive hindbrain1.52e-1612
telencephalic nucleus2.09e-157
segmental subdivision of nervous system4.29e-1513
gyrus4.50e-146
multi-tissue structure1.48e-13342
brainstem2.94e-136
organ5.72e-13503
parietal lobe1.60e-125
limbic system3.40e-125
occipital lobe3.48e-125
temporal lobe5.92e-126
regional part of metencephalon2.74e-119
metencephalon2.74e-119
future metencephalon2.74e-119
embryonic structure6.39e-10564
anatomical system1.18e-09624
anatomical group1.32e-09625
germ layer1.54e-09560
germ layer / neural crest1.54e-09560
embryonic tissue1.54e-09560
presumptive structure1.54e-09560
germ layer / neural crest derived structure1.54e-09560
epiblast (generic)1.54e-09560
atypical epithelium3.28e-094
corpus striatum3.90e-094
striatum3.90e-094
ventral part of telencephalon3.90e-094
future corpus striatum3.90e-094
developing anatomical structure5.03e-09581
embryo5.32e-09592
multi-cellular organism9.92e-09656
frontal cortex7.48e-083
pons8.57e-083
diencephalon8.88e-087
future diencephalon8.88e-087
ciliary epithelium9.60e-083
ciliary body9.60e-083
medulla oblongata3.92e-073
caudate-putamen3.92e-073
myelencephalon3.92e-073
dorsal striatum3.92e-073
future myelencephalon3.92e-073
spinal cord6.66e-073
dorsal region element6.66e-073


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

This analysis result is provided for C0 - C305 clusters.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C1652&oldid=2557989"