FFCP PHASE1:Hg19::chr19:43969827..43969834,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000860!4.32e-09!45;CL:0002057!5.72e-09!42;CL:0000557!6.05e-09!71;CL:0002009!1.20e-08!65;CL:0000839!3.27e-08!70;CL:0002194!4.03e-08!63;CL:0000576!4.03e-08!63;CL:0000040!4.03e-08!63;CL:0000559!4.03e-08!63;CL:0000766!8.88e-08!76 | |ontology_enrichment_celltype=CL:0000860!4.32e-09!45;CL:0002057!5.72e-09!42;CL:0000557!6.05e-09!71;CL:0002009!1.20e-08!65;CL:0000839!3.27e-08!70;CL:0002194!4.03e-08!63;CL:0000576!4.03e-08!63;CL:0000040!4.03e-08!63;CL:0000559!4.03e-08!63;CL:0000766!8.88e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000244;5.33e-22;4!CL:0000731;5.33e-22;4!CL:0002252;9.96e-11;1!CL:0002537;7.57e-09;5!CL:0000349;2.56e-08;19 | |ontology_enrichment_celltype_v019=CL:0000244;5.33e-22;4!CL:0000731;5.33e-22;4!CL:0002252;9.96e-11;1!CL:0002537;7.57e-09;5!CL:0000349;2.56e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.79e-22,4;CL:0000731,2.79e-22,4;CL:0002252,5.57e-11,1;CL:0002537,7.72e-09,5;CL:0000349,2.64e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.57e-11;1 | |ontology_enrichment_development_v019=UBERON:0009143;4.57e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.61e-10!169;UBERON:0000925!5.61e-10!169;UBERON:0006595!5.61e-10!169;UBERON:0005631!7.22e-09!14;UBERON:0000158!7.22e-09!14;UBERON:0002371!5.80e-08!80;UBERON:0001474!1.11e-07!86;UBERON:0000077!2.13e-07!130;UBERON:0000062!2.22e-07!511;UBERON:0001987!2.62e-07!4;UBERON:0004340!2.62e-07!4;UBERON:0001004!3.48e-07!72 | |ontology_enrichment_uberon=UBERON:0004119!5.61e-10!169;UBERON:0000925!5.61e-10!169;UBERON:0006595!5.61e-10!169;UBERON:0005631!7.22e-09!14;UBERON:0000158!7.22e-09!14;UBERON:0002371!5.80e-08!80;UBERON:0001474!1.11e-07!86;UBERON:0000077!2.13e-07!130;UBERON:0000062!2.22e-07!511;UBERON:0001987!2.62e-07!4;UBERON:0004340!2.62e-07!4;UBERON:0001004!3.48e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.89e-18;5!UBERON:0005910;7.04e-15;6!UBERON:0001043;1.09e-13;3!UBERON:0000305;4.48e-13;7!UBERON:0002372;3.40e-11;1!UBERON:0001961;3.40e-11;1!UBERON:0001744;3.40e-11;1!UBERON:0001042;3.40e-11;1!UBERON:0001735;3.40e-11;1!UBERON:0000997;9.96e-11;1!UBERON:0005056;9.96e-11;1!UBERON:0004176;9.96e-11;1!UBERON:0005631;2.60e-09;10!UBERON:0000158;2.60e-09;10!UBERON:0000486;1.06e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000365;9.89e-18;5!UBERON:0005910;7.04e-15;6!UBERON:0001043;1.09e-13;3!UBERON:0000305;4.48e-13;7!UBERON:0002372;3.40e-11;1!UBERON:0001961;3.40e-11;1!UBERON:0001744;3.40e-11;1!UBERON:0001042;3.40e-11;1!UBERON:0001735;3.40e-11;1!UBERON:0000997;9.96e-11;1!UBERON:0005056;9.96e-11;1!UBERON:0004176;9.96e-11;1!UBERON:0005631;2.60e-09;10!UBERON:0000158;2.60e-09;10!UBERON:0000486;1.06e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.91e-18,5;UBERON:0005910,4.60e-15,6;UBERON:0001043,7.92e-14,3;UBERON:0009143,7.92e-14,3;UBERON:0000305,5.61e-13,7;UBERON:0004871,2.01e-11,8;UBERON:0005631,3.28e-11,14;UBERON:0000158,3.28e-11,14;UBERON:0002372,3.76e-11,1;UBERON:0001961,3.76e-11,1;UBERON:0001744,3.76e-11,1;UBERON:0001735,3.76e-11,1;UBERON:0000997,8.22e-11,1;UBERON:0005056,8.22e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,1.01778767145695,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0,0,0,1.35426486594342,0.752969358170419,1.09162460023138,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0.251248665256743,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.728590576585084,0,0.649094787309367,0.522389211897802,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,1.68471475667626,3.54744122829341,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0,3.37876772309155,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.254253650292766,1.18193840883968,0,0,0,0,0,0,0,0,0,0.762569244632931,1.25481369850743,0.461701551022782,0,0.23056390438806,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,1.32930774541437,0,0,0,0,0,0,1.56787835863004,0,0.17472666824203,0,0,0,0.246346371159628,2.13375836274523,0,0,0,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9337051562167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.335566295393377,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.714193294391221,0.0645889098360061,0.186224142887574,0,0,0,0.653150243690884,0,3.16554649168561,0.286888821570705,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,1.01778767145695,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0,0,0,1.35426486594342,0.752969358170419,1.09162460023138,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0.251248665256743,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.728590576585084,0,0.649094787309367,0.522389211897802,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,1.68471475667626,3.54744122829341,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0,3.37876772309155,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.254253650292766,1.18193840883968,0,0,0,0,0,0,0,0,0,0.762569244632931,1.25481369850743,0.461701551022782,0,0.23056390438806,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,1.32930774541437,0,0,0,0,0,0,1.56787835863004,0,0.17472666824203,0,0,0,0.246346371159628,2.13375836274523,0,0,0,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9337051562167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.335566295393377,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.714193294391221,0.0645889098360061,0.186224142887574,0,0,0,0.653150243690884,0,3.16554649168561,0.286888821570705,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p4@LYPD3 | |short_description=p4@LYPD3 | ||
}} | }} |
Revision as of 06:44, 21 November 2012
Short description: | p4@LYPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LYPD3_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 0bp_to_ENST00000244333, NM_014400, uc002owl.1, uc002owm.2_5end |
EntrezGene: | LYPD3 |
HGNC: | 24880 |
UniProt: | O95274B2RBR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.79e-22 | 4 |
urothelial cell | 2.79e-22 | 4 |
epithelial cell of esophagus | 5.57e-11 | 1 |
amnion mesenchymal stem cell | 7.72e-09 | 5 |
extraembryonic cell | 2.64e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.91e-18 | 5 |
transitional epithelium | 4.60e-15 | 6 |
esophagus | 7.92e-14 | 3 |
esophageal region | 7.92e-14 | 3 |
amnion | 5.61e-13 | 7 |
somatic layer of lateral plate mesoderm | 2.01e-11 | 8 |
extraembryonic membrane | 3.28e-11 | 14 |
membranous layer | 3.28e-11 | 14 |
tonsil | 3.76e-11 | 1 |
mucosa-associated lymphoid tissue | 3.76e-11 | 1 |
lymphoid tissue | 3.76e-11 | 1 |
tonsillar ring | 3.76e-11 | 1 |
mammalian vulva | 8.22e-11 | 1 |
external female genitalia | 8.22e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.