FFCP PHASE1:Hg19::chr17:38520975..38520995,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.86e-14!180;CL:0000183!3.07e-10!59;CL:0000057!1.78e-09!75;CL:0000680!2.01e-09!57;CL:0000056!2.01e-09!57;CL:0000355!2.01e-09!57;CL:0000187!5.67e-09!54;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.86e-14!180;CL:0000183!3.07e-10!59;CL:0000057!1.78e-09!75;CL:0000680!2.01e-09!57;CL:0000056!2.01e-09!57;CL:0000355!2.01e-09!57;CL:0000187!5.67e-09!54;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.26e-12;9!CL:0000447;1.26e-12;9!CL:0000499;1.32e-11;28!CL:0000138;4.97e-09;6!CL:0002540;1.79e-08;6!CL:0000669;3.77e-08;4!CL:0002554;3.88e-08;2!CL:0002575;4.22e-08;2!CL:1000487;1.81e-07;2!CL:0000327;2.86e-07;15!CL:0002195;5.43e-07;2!CL:0002571;5.43e-07;2!CL:0002600;5.43e-07;2!CL:0002602;5.43e-07;2 | |ontology_enrichment_celltype_v019=CL:0000153;1.26e-12;9!CL:0000447;1.26e-12;9!CL:0000499;1.32e-11;28!CL:0000138;4.97e-09;6!CL:0002540;1.79e-08;6!CL:0000669;3.77e-08;4!CL:0002554;3.88e-08;2!CL:0002575;4.22e-08;2!CL:1000487;1.81e-07;2!CL:0000327;2.86e-07;15!CL:0002195;5.43e-07;2!CL:0002571;5.43e-07;2!CL:0002600;5.43e-07;2!CL:0002602;5.43e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.16e-12,9;CL:0000447,1.16e-12,9;CL:0000499,1.41e-11,28;CL:0000058,4.44e-09,6;CL:0000138,4.44e-09,6;CL:0002540,1.34e-08,6;CL:0000669,2.83e-08,4;CL:0002554,3.92e-08,2;CL:0002575,4.33e-08,2;CL:1000487,1.61e-07,2;CL:0000327,2.72e-07,15;CL:0002602,2.85e-07,2;CL:0002195,3.55e-07,2;CL:0002571,3.55e-07,2;CL:0002600,7.90e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.84e-11!83;UBERON:0002329!2.84e-11!83;UBERON:0003077!2.84e-11!83;UBERON:0003059!2.84e-11!83;UBERON:0007282!2.84e-11!83;UBERON:0009618!2.84e-11!83;UBERON:0007285!2.84e-11!83;UBERON:0000481!4.79e-11!347;UBERON:0004290!6.11e-10!70;UBERON:0005256!3.41e-09!143;UBERON:0002385!7.34e-09!63;UBERON:0001015!7.34e-09!63;UBERON:0000383!7.34e-09!63;UBERON:0000486!8.49e-09!82;UBERON:0001134!9.05e-09!61;UBERON:0002036!9.05e-09!61;UBERON:0003082!9.05e-09!61;UBERON:0003104!1.81e-08!238;UBERON:0009142!1.81e-08!238;UBERON:0002100!5.25e-08!216;UBERON:0000468!1.10e-07!659;UBERON:0000475!2.62e-07!365;UBERON:0007100!3.23e-07!27;UBERON:0000948!5.56e-07!24;UBERON:0005498!5.56e-07!24;UBERON:0004140!5.56e-07!24;UBERON:0009881!5.56e-07!24;UBERON:0004141!5.56e-07!24;UBERON:0003084!5.56e-07!24;UBERON:0007005!5.56e-07!24;UBERON:0004139!5.56e-07!24;UBERON:0004291!5.56e-07!24 | |ontology_enrichment_uberon=UBERON:0000914!2.84e-11!83;UBERON:0002329!2.84e-11!83;UBERON:0003077!2.84e-11!83;UBERON:0003059!2.84e-11!83;UBERON:0007282!2.84e-11!83;UBERON:0009618!2.84e-11!83;UBERON:0007285!2.84e-11!83;UBERON:0000481!4.79e-11!347;UBERON:0004290!6.11e-10!70;UBERON:0005256!3.41e-09!143;UBERON:0002385!7.34e-09!63;UBERON:0001015!7.34e-09!63;UBERON:0000383!7.34e-09!63;UBERON:0000486!8.49e-09!82;UBERON:0001134!9.05e-09!61;UBERON:0002036!9.05e-09!61;UBERON:0003082!9.05e-09!61;UBERON:0003104!1.81e-08!238;UBERON:0009142!1.81e-08!238;UBERON:0002100!5.25e-08!216;UBERON:0000468!1.10e-07!659;UBERON:0000475!2.62e-07!365;UBERON:0007100!3.23e-07!27;UBERON:0000948!5.56e-07!24;UBERON:0005498!5.56e-07!24;UBERON:0004140!5.56e-07!24;UBERON:0009881!5.56e-07!24;UBERON:0004141!5.56e-07!24;UBERON:0003084!5.56e-07!24;UBERON:0007005!5.56e-07!24;UBERON:0004139!5.56e-07!24;UBERON:0004291!5.56e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.14e-13;8!UBERON:0000982;2.14e-13;8!UBERON:0004770;2.14e-13;8!UBERON:0004151;4.85e-10;3!UBERON:0011135;7.14e-10;5!UBERON:0002216;7.14e-10;5!UBERON:0011134;7.14e-10;5!UBERON:0002209;7.14e-10;5!UBERON:0002213;7.14e-10;5!UBERON:0007844;7.14e-10;5!UBERON:0011138;7.14e-10;5!UBERON:0001130;7.14e-10;5!UBERON:0001066;7.14e-10;5!UBERON:0001468;7.14e-10;5!UBERON:0002405;7.64e-08;27!UBERON:0002081;2.27e-07;2!UBERON:0006444;5.43e-07;2!UBERON:0001995;5.43e-07;2!UBERON:0004715;5.43e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004905;2.14e-13;8!UBERON:0000982;2.14e-13;8!UBERON:0004770;2.14e-13;8!UBERON:0004151;4.85e-10;3!UBERON:0011135;7.14e-10;5!UBERON:0002216;7.14e-10;5!UBERON:0011134;7.14e-10;5!UBERON:0002209;7.14e-10;5!UBERON:0002213;7.14e-10;5!UBERON:0007844;7.14e-10;5!UBERON:0011138;7.14e-10;5!UBERON:0001130;7.14e-10;5!UBERON:0001066;7.14e-10;5!UBERON:0001468;7.14e-10;5!UBERON:0002405;7.64e-08;27!UBERON:0002081;2.27e-07;2!UBERON:0006444;5.43e-07;2!UBERON:0001995;5.43e-07;2!UBERON:0004715;5.43e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.12e-14,8;UBERON:0000982,6.12e-14,8;UBERON:0004770,6.12e-14,8;UBERON:0011135,1.81e-10,5;UBERON:0002216,1.81e-10,5;UBERON:0011134,1.81e-10,5;UBERON:0002209,1.81e-10,5;UBERON:0002213,1.81e-10,5;UBERON:0005856,1.81e-10,5;UBERON:0005866,1.81e-10,5;UBERON:0005863,1.81e-10,5;UBERON:0007844,1.81e-10,5;UBERON:0011138,1.81e-10,5;UBERON:0001130,1.81e-10,5;UBERON:0001066,1.81e-10,5;UBERON:0001468,1.81e-10,5;UBERON:0004151,3.95e-10,3;UBERON:0004457,8.30e-09,12;UBERON:0000042,8.30e-09,12;UBERON:0002081,1.83e-07,2;UBERON:0010227,1.83e-07,2;UBERON:0003104,2.47e-07,160;UBERON:0009142,2.47e-07,160;UBERON:0006444,2.85e-07,2;UBERON:0001995,2.85e-07,2;UBERON:0004715,2.85e-07,2;UBERON:0007503,2.91e-07,78;UBERON:0005256,9.03e-07,122 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.26858963686374,0,0,0,0,0,0,0.245733936501509,0,0,0,1.36142988256051,1.65698687863958,0,0,0,0,1.35433163884467,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,2.1686349143074,3.00802746381534,2.02785126545153,0,1.45990461090791,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,1.20848795132744,0,1.70843440283719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,1.36221684880438,0,0.70296429550139,0.312160076830321,0,0.448346041655403,0,0.323745888736263,0,1.22492502752936,0.61417158655884,0.929932030581889,0,0.494533858557114,5.46096817162816,5.03032699271367,0,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,1.50238058906597,0.226864366320042,0.179389635688862,0.427114777637135,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,1.01254888506529,0.969876340912871,0,0,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,4.69348596989448,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,1.03993478527958,0,0,0,1.29929802984966,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.2933531432838,0,0,0,0.797814349754612,0,2.05765899409714,0,1.3321108950805,1.42977993658148,0.542621605391443,0.823240336780769,0.325736184293735,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.59498939234882,0.500170521059677,1.89885516589815,0.831883446123229,0.713715955188647,0.946214490203608,0.35142424497814,0,0,0,0,0.184369168541703,1.12948698808508,5.286631251494,4.46086450954113,0,0,0,0,0,0,0.496215615637554,0,0,1.15325234330131,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,1.03850885836724,0,0,0,0,0.803701137152247,2.1850940160806,1.57349297951309,0,0,0,0,0,3.4120015221269,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,1.6068392984416,1.06337790121334,0.462145851343933,0,0.275673144969061,1.07420244868274,1.0151168573996,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,1.23213432070436,1.06461206063404,0,0.18532421910392,0,1.116475108079,0.632758849437452,0,0.255897791311334,0.855877976067841,0.318203247925937,0,1.61885211824983,0.823611089208164,0,0.404364963146632,0,0.842516912477962,0.48763373908959,1.46228093778771,0,3.13949796238367,1.41405431953713,0,0,0.66343897524122,0.438450885253763,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0.286822704408103,0,0,0,3.16661452946496,1.31717957183961,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0.264768380074501,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,2.15361907373044,0.199679000498991,0,0.223171457441873,0.671834724867263,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,2.35806457649499,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,1.25783950876288,1.77962244319307,0.686520205190771,0.453692771289717,0.15543720058278,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0.363697318405119,0,0,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0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| ||
|short_description=p1@GJD3 | |short_description=p1@GJD3 | ||
}} | }} |
Revision as of 03:47, 21 November 2012
Short description: | p1@GJD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GJD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_NM_152219, uc010cwz.2_5end |
EntrezGene: | GJD3 |
HGNC: | 19147 |
UniProt: | Q8N144 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.16e-12 | 9 |
carbohydrate secreting cell | 1.16e-12 | 9 |
stromal cell | 1.41e-11 | 28 |
chondroblast | 4.44e-09 | 6 |
chondrocyte | 4.44e-09 | 6 |
mesenchymal stem cell of the bone marrow | 1.34e-08 | 6 |
pericyte cell | 2.83e-08 | 4 |
fibroblast of lymphatic vessel | 3.92e-08 | 2 |
central nervous system pericyte | 4.33e-08 | 2 |
smooth muscle cell of prostate | 1.61e-07 | 2 |
extracellular matrix secreting cell | 2.72e-07 | 15 |
annulus pulposus cell | 2.85e-07 | 2 |
hepatic stem cell | 3.55e-07 | 2 |
hepatic mesenchymal stem cell | 3.55e-07 | 2 |
smooth muscle cell of trachea | 7.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.12e-14 | 8 |
skeletal joint | 6.12e-14 | 8 |
articular system | 6.12e-14 | 8 |
intervertebral cartilage | 1.81e-10 | 5 |
symphysis | 1.81e-10 | 5 |
nonsynovial joint | 1.81e-10 | 5 |
fibrous joint | 1.81e-10 | 5 |
cartilaginous joint | 1.81e-10 | 5 |
developing mesenchymal condensation | 1.81e-10 | 5 |
pre-cartilage condensation | 1.81e-10 | 5 |
cartilaginous condensation | 1.81e-10 | 5 |
cartilage element | 1.81e-10 | 5 |
post-cranial axial skeletal system | 1.81e-10 | 5 |
vertebral column | 1.81e-10 | 5 |
intervertebral disk | 1.81e-10 | 5 |
intervertebral joint | 1.81e-10 | 5 |
cardiac chamber | 3.95e-10 | 3 |
cavity lining | 8.30e-09 | 12 |
serous membrane | 8.30e-09 | 12 |
cardiac atrium | 1.83e-07 | 2 |
future cardiac atrium | 1.83e-07 | 2 |
mesenchyme | 2.47e-07 | 160 |
entire embryonic mesenchyme | 2.47e-07 | 160 |
annulus fibrosus | 2.85e-07 | 2 |
fibrocartilage | 2.85e-07 | 2 |
annulus fibrosus disci intervertebralis | 2.85e-07 | 2 |
epithelial vesicle | 2.91e-07 | 78 |
trunk mesenchyme | 9.03e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.