FFCP PHASE1:Hg19::chr11:6423967..6423978,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!8.28e-47!25;CL:0000827!8.28e-47!25;CL:0000791!4.36e-44!18;CL:0000789!4.36e-44!18;CL:0002420!4.36e-44!18;CL:0002419!4.36e-44!18;CL:0000790!4.36e-44!18;CL:0000838!3.07e-42!52;CL:0000542!2.78e-41!53;CL:0000051!2.78e-41!53;CL:0000625!1.42e-31!11;CL:0002087!1.19e-21!119;CL:0000738!5.28e-21!140;CL:0000037!2.46e-16!172;CL:0000566!2.46e-16!172;CL:0002031!2.48e-16!124;CL:0000988!7.32e-16!182;CL:0002032!4.93e-13!165;CL:0000837!4.93e-13!165;CL:0000624!1.03e-11!6;CL:0000842!1.86e-09!3;CL:0000623!6.13e-09!3;CL:0000825!6.13e-09!3;CL:0000080!9.89e-08!6;CL:0000224!3.52e-07!4;CL:0000893!5.78e-07!2;CL:0002489!5.78e-07!2;CL:0000809!5.78e-07!2;CL:0000808!5.78e-07!2;CL:0000894!5.78e-07!2;CL:0000806!5.78e-07!2;CL:0000807!5.78e-07!2;CL:0000805!5.78e-07!2;CL:0002425!5.78e-07!2 | |ontology_enrichment_celltype=CL:0000084!8.28e-47!25;CL:0000827!8.28e-47!25;CL:0000791!4.36e-44!18;CL:0000789!4.36e-44!18;CL:0002420!4.36e-44!18;CL:0002419!4.36e-44!18;CL:0000790!4.36e-44!18;CL:0000838!3.07e-42!52;CL:0000542!2.78e-41!53;CL:0000051!2.78e-41!53;CL:0000625!1.42e-31!11;CL:0002087!1.19e-21!119;CL:0000738!5.28e-21!140;CL:0000037!2.46e-16!172;CL:0000566!2.46e-16!172;CL:0002031!2.48e-16!124;CL:0000988!7.32e-16!182;CL:0002032!4.93e-13!165;CL:0000837!4.93e-13!165;CL:0000624!1.03e-11!6;CL:0000842!1.86e-09!3;CL:0000623!6.13e-09!3;CL:0000825!6.13e-09!3;CL:0000080!9.89e-08!6;CL:0000224!3.52e-07!4;CL:0000893!5.78e-07!2;CL:0002489!5.78e-07!2;CL:0000809!5.78e-07!2;CL:0000808!5.78e-07!2;CL:0000894!5.78e-07!2;CL:0000806!5.78e-07!2;CL:0000807!5.78e-07!2;CL:0000805!5.78e-07!2;CL:0002425!5.78e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.97e-21;11!CL:0000084;3.14e-20;25!CL:0000791;1.12e-19;18!CL:0000789;1.12e-19;18!CL:0002419;1.12e-19;18!CL:0002127;2.21e-15;1!CL:0000911;2.21e-15;1!CL:0000814;2.21e-15;1!CL:0000771;2.40e-08;2!CL:0000542;5.18e-07;53 | |ontology_enrichment_celltype_v019=CL:0000625;5.97e-21;11!CL:0000084;3.14e-20;25!CL:0000791;1.12e-19;18!CL:0000789;1.12e-19;18!CL:0002419;1.12e-19;18!CL:0002127;2.21e-15;1!CL:0000911;2.21e-15;1!CL:0000814;2.21e-15;1!CL:0000771;2.40e-08;2!CL:0000542;5.18e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.95e-21,11;CL:0000084,2.48e-20,25;CL:0000827,2.48e-20,25;CL:0000791,8.36e-20,18;CL:0000789,8.36e-20,18;CL:0002420,8.36e-20,18;CL:0002419,8.36e-20,18;CL:0000790,8.36e-20,18;CL:0002127,2.38e-15,1;CL:0000914,2.38e-15,1;CL:0000911,2.38e-15,1;CL:0000814,2.38e-15,1;CL:0002042,2.38e-15,1;CL:0002039,2.38e-15,1;CL:0002040,2.38e-15,1;CL:0002041,2.38e-15,1;CL:0000838,1.20e-09,52;CL:0000542,1.84e-09,53;CL:0000051,1.84e-09,53;CL:0000771,2.31e-08,2;CL:0000893,2.48e-08,2;CL:0002489,2.48e-08,2;CL:0000809,2.48e-08,2;CL:0000808,2.48e-08,2;CL:0000894,2.48e-08,2;CL:0000806,2.48e-08,2;CL:0000807,2.48e-08,2;CL:0000805,2.48e-08,2;CL:0002425,2.48e-08,2;CL:0000738,1.68e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-19;18!CL:0002425;2.40e-08;2!CL:0000051;5.18e-07;53 | |ontology_enrichment_development_v019=CL:0000790;1.12e-19;18!CL:0002425;2.40e-08;2!CL:0000051;5.18e-07;53 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.42e-15!7;UBERON:0002370!1.05e-12!4;UBERON:0005058!1.05e-12!4;UBERON:0009113!1.05e-12!4;UBERON:0003295!1.05e-12!4;UBERON:0005562!1.05e-12!4;UBERON:0000178!6.58e-11!15;UBERON:0000179!6.58e-11!15;UBERON:0000463!6.58e-11!15;UBERON:0003351!1.88e-08!6 | |ontology_enrichment_uberon=UBERON:0004177!7.42e-15!7;UBERON:0002370!1.05e-12!4;UBERON:0005058!1.05e-12!4;UBERON:0009113!1.05e-12!4;UBERON:0003295!1.05e-12!4;UBERON:0005562!1.05e-12!4;UBERON:0000178!6.58e-11!15;UBERON:0000179!6.58e-11!15;UBERON:0000463!6.58e-11!15;UBERON:0003351!1.88e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-08;2!UBERON:0005058;1.55e-08;2!UBERON:0009113;1.55e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-08;2!UBERON:0005058;1.55e-08;2!UBERON:0009113;1.55e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.94e-15,4;UBERON:0005058,3.94e-15,4;UBERON:0009113,3.94e-15,4;UBERON:0003295,3.94e-15,4;UBERON:0005562,3.94e-15,4;UBERON:0003351,2.09e-10,6;UBERON:0004177,4.76e-09,7;UBERON:0005057,4.76e-09,7 | |||
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| ||
|short_description=p15@APBB1 | |short_description=p15@APBB1 | ||
}} | }} |
Revision as of 01:27, 21 November 2012
Short description: | p15@APBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_APBB1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -12bp_to_uc010rad.1_5end |
EntrezGene: | APBB1 |
HGNC: | 581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.95e-21 | 11 |
T cell | 2.48e-20 | 25 |
pro-T cell | 2.48e-20 | 25 |
mature alpha-beta T cell | 8.36e-20 | 18 |
alpha-beta T cell | 8.36e-20 | 18 |
immature T cell | 8.36e-20 | 18 |
mature T cell | 8.36e-20 | 18 |
immature alpha-beta T cell | 8.36e-20 | 18 |
innate effector T cell | 2.38e-15 | 1 |
immature NK T cell | 2.38e-15 | 1 |
effector T cell | 2.38e-15 | 1 |
mature NK T cell | 2.38e-15 | 1 |
immature NK T cell stage IV | 2.38e-15 | 1 |
immature NK T cell stage I | 2.38e-15 | 1 |
immature NK T cell stage II | 2.38e-15 | 1 |
immature NK T cell stage III | 2.38e-15 | 1 |
lymphoid lineage restricted progenitor cell | 1.20e-09 | 52 |
lymphocyte | 1.84e-09 | 53 |
common lymphoid progenitor | 1.84e-09 | 53 |
eosinophil | 2.31e-08 | 2 |
thymocyte | 2.48e-08 | 2 |
double negative thymocyte | 2.48e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.48e-08 | 2 |
DN4 thymocyte | 2.48e-08 | 2 |
DN1 thymic pro-T cell | 2.48e-08 | 2 |
DN2 thymocyte | 2.48e-08 | 2 |
DN3 thymocyte | 2.48e-08 | 2 |
immature single positive thymocyte | 2.48e-08 | 2 |
early T lineage precursor | 2.48e-08 | 2 |
leukocyte | 1.68e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.94e-15 | 4 |
hemolymphoid system gland | 3.94e-15 | 4 |
thymic region | 3.94e-15 | 4 |
pharyngeal gland | 3.94e-15 | 4 |
thymus primordium | 3.94e-15 | 4 |
pharyngeal epithelium | 2.09e-10 | 6 |
hemopoietic organ | 4.76e-09 | 7 |
immune organ | 4.76e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.