FFCP PHASE1:Hg19::chr17:2220497..2220501,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000838!4.82e-07!52;CL:0000542!9.12e-07!53;CL:0000051!9.12e-07!53 | |ontology_enrichment_celltype=CL:0000838!4.82e-07!52;CL:0000542!9.12e-07!53;CL:0000051!9.12e-07!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.14e-31!235;DOID:14566!1.35e-31!239;DOID:0050687!5.93e-25!143;DOID:0050686!4.78e-18!137;DOID:305!1.35e-16!106;DOID:3095!3.99e-09!22;DOID:2994!3.99e-09!22;DOID:0050615!4.77e-08!16;DOID:7!7.88e-08!39;DOID:171!1.78e-07!10;DOID:1324!3.26e-07!15;DOID:0060058!7.08e-07!10 | |ontology_enrichment_disease=DOID:162!1.14e-31!235;DOID:14566!1.35e-31!239;DOID:0050687!5.93e-25!143;DOID:0050686!4.78e-18!137;DOID:305!1.35e-16!106;DOID:3095!3.99e-09!22;DOID:2994!3.99e-09!22;DOID:0050615!4.77e-08!16;DOID:7!7.88e-08!39;DOID:171!1.78e-07!10;DOID:1324!3.26e-07!15;DOID:0060058!7.08e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3193;3.02e-11;2!DOID:962;3.02e-11;2!DOID:171;6.80e-09;10!DOID:1192;6.34e-08;3 | |ontology_enrichment_disease_v019=DOID:3193;3.02e-11;2!DOID:962;3.02e-11;2!DOID:171;6.80e-09;10!DOID:1192;6.34e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,4.52e-11,2;DOID:962,4.52e-11,2;DOID:171,7.07e-09,10;DOID:1192,8.29e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.22e-21;1!UBERON:0000026;4.22e-21;1!UBERON:0008784;4.22e-21;1!UBERON:0006058;4.22e-21;1!UBERON:0003663;4.22e-21;1!UBERON:0004256;4.22e-21;1!UBERON:0004708;4.22e-21;1!UBERON:0002101;4.22e-21;1!UBERON:0004709;4.22e-21;1!UBERON:0002529;4.22e-21;1!UBERON:0010538;4.22e-21;1!UBERON:0003661;4.22e-21;1!UBERON:0010890;4.22e-21;1!UBERON:0002471;4.22e-21;1!UBERON:0001383;4.22e-21;1!UBERON:0010758;4.22e-21;1!UBERON:0010707;4.22e-21;1!UBERON:0000978;4.22e-21;1!UBERON:0002103;4.22e-21;1!UBERON:0001665;4.22e-21;1!UBERON:0003823;4.22e-21;1!UBERON:0000154;4.22e-21;1!UBERON:0010709;4.22e-21;1!UBERON:0003714;3.02e-11;2!UBERON:0005090;3.02e-11;2!UBERON:0001630;3.02e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0001389;4.22e-21;1!UBERON:0000026;4.22e-21;1!UBERON:0008784;4.22e-21;1!UBERON:0006058;4.22e-21;1!UBERON:0003663;4.22e-21;1!UBERON:0004256;4.22e-21;1!UBERON:0004708;4.22e-21;1!UBERON:0002101;4.22e-21;1!UBERON:0004709;4.22e-21;1!UBERON:0002529;4.22e-21;1!UBERON:0010538;4.22e-21;1!UBERON:0003661;4.22e-21;1!UBERON:0010890;4.22e-21;1!UBERON:0002471;4.22e-21;1!UBERON:0001383;4.22e-21;1!UBERON:0010758;4.22e-21;1!UBERON:0010707;4.22e-21;1!UBERON:0000978;4.22e-21;1!UBERON:0002103;4.22e-21;1!UBERON:0001665;4.22e-21;1!UBERON:0003823;4.22e-21;1!UBERON:0000154;4.22e-21;1!UBERON:0010709;4.22e-21;1!UBERON:0003714;3.02e-11;2!UBERON:0005090;3.02e-11;2!UBERON:0001630;3.02e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.22e-21,1;UBERON:0001389,4.22e-21,1;UBERON:0000026,4.22e-21,1;UBERON:0008784,4.22e-21,1;UBERON:0006058,4.22e-21,1;UBERON:0003663,4.22e-21,1;UBERON:0004256,4.22e-21,1;UBERON:0004708,4.22e-21,1;UBERON:0002101,4.22e-21,1;UBERON:0004709,4.22e-21,1;UBERON:0002529,4.22e-21,1;UBERON:0010538,4.22e-21,1;UBERON:0003661,4.22e-21,1;UBERON:0010890,4.22e-21,1;UBERON:0002471,4.22e-21,1;UBERON:0001383,4.22e-21,1;UBERON:0004357,4.22e-21,1;UBERON:0004347,4.22e-21,1;UBERON:0005420,4.22e-21,1;UBERON:0005732,4.22e-21,1;UBERON:0010758,4.22e-21,1;UBERON:0010707,4.22e-21,1;UBERON:0000978,4.22e-21,1;UBERON:0002103,4.22e-21,1;UBERON:0001665,4.22e-21,1;UBERON:0003823,4.22e-21,1;UBERON:0000154,4.22e-21,1;UBERON:0010709,4.22e-21,1;UBERON:0005733,4.22e-21,1;UBERON:0005730,4.22e-21,1;UBERON:0005090,3.02e-11,2;UBERON:0001630,3.02e-11,2;UBERON:0003714,4.52e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.387336002901508,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0.590129310341499,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.394061520403854,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0.432807638929335,0.355709216742071,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.779160935160341,0.16480387422676,0.63337622438398,0.19924798825107,0,0.251932747854276,0.306806047506464,0.123084805461069,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.568967241427498,0.254253650292766,0.236387681767936,0.344743373241465,0.874813840149763,0.347249989866585,0,0,0,0,0.591095237907095,0,0.21787692703798,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0.476809736941136,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0.234264445725339,0.547364367646998,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0,0.300646838828985,0.414752765588989,0,0.330991955875499,0,0,0.853828638089378,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0.822251547880505,0.19871461170299,0,0,0.480952921509202,0,0,0.432271251462318,0.229073192331831,0,1.4405479798815,0.248505071130865,0,0.135904206073614,0.104602846312333,0.203996435272644,0.577901179803038,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.295282444544246,0.169346664131569,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,0.129282956361551,0,0,1.40963004463334,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0.628216385000937,0,0,0,0.573409195690071,0,0,0.415045904808692,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.963099152036517,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.39997479170986,0.106691729694141,0.172214979660816,0,0,0,0,0.639471856518258,0.107824811396682,0.786329709279482,0.218419276384028,0.33946505990805,0.637724760305049,1.48722917110803,1.11728983594649,0.318004350653419,0.630893960010027,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.231051332300676,0,0.690359926060101,0,0,0.40341013740704,0,0,0.49131575253029,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.697448552208751,0.695433089210318,0.801711364730253,0.62164849248911,0.3414369541879,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0.955538938977433,0.335566295393377,0.098150233615243,0,1.29485767437579,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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.387336002901508,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0.590129310341499,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.394061520403854,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0.432807638929335,0.355709216742071,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.779160935160341,0.16480387422676,0.63337622438398,0.19924798825107,0,0.251932747854276,0.306806047506464,0.123084805461069,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.568967241427498,0.254253650292766,0.236387681767936,0.344743373241465,0.874813840149763,0.347249989866585,0,0,0,0,0.591095237907095,0,0.21787692703798,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0.476809736941136,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0.234264445725339,0.547364367646998,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0,0.300646838828985,0.414752765588989,0,0.330991955875499,0,0,0.853828638089378,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0.822251547880505,0.19871461170299,0,0,0.480952921509202,0,0,0.432271251462318,0.229073192331831,0,1.4405479798815,0.248505071130865,0,0.135904206073614,0.104602846312333,0.203996435272644,0.577901179803038,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.295282444544246,0.169346664131569,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,0.129282956361551,0,0,1.40963004463334,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0.628216385000937,0,0,0,0.573409195690071,0,0,0.415045904808692,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.963099152036517,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.39997479170986,0.106691729694141,0.172214979660816,0,0,0,0,0.639471856518258,0.107824811396682,0.786329709279482,0.218419276384028,0.33946505990805,0.637724760305049,1.48722917110803,1.11728983594649,0.318004350653419,0.630893960010027,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.231051332300676,0,0.690359926060101,0,0,0.40341013740704,0,0,0.49131575253029,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.697448552208751,0.695433089210318,0.801711364730253,0.62164849248911,0.3414369541879,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0.955538938977433,0.335566295393377,0.098150233615243,0,1.29485767437579,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| ||
|short_description=p@chr17:2220497..2220501,- | |short_description=p@chr17:2220497..2220501,- | ||
}} | }} |
Revision as of 09:03, 20 November 2012
Short description: | p@chr17:2220497..2220501, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:2220497..2220501, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.22e-21 | 1 |
soleus muscle | 4.22e-21 | 1 |
appendage | 4.22e-21 | 1 |
lower limb segment | 4.22e-21 | 1 |
multi-limb segment region | 4.22e-21 | 1 |
hindlimb muscle | 4.22e-21 | 1 |
hindlimb zeugopod muscle | 4.22e-21 | 1 |
paired limb/fin | 4.22e-21 | 1 |
limb | 4.22e-21 | 1 |
pelvic appendage | 4.22e-21 | 1 |
limb segment | 4.22e-21 | 1 |
paired limb/fin segment | 4.22e-21 | 1 |
limb muscle | 4.22e-21 | 1 |
pelvic complex muscle | 4.22e-21 | 1 |
zeugopod | 4.22e-21 | 1 |
muscle of leg | 4.22e-21 | 1 |
paired limb/fin bud | 4.22e-21 | 1 |
limb bud | 4.22e-21 | 1 |
pelvic appendage bud | 4.22e-21 | 1 |
limb/fin field | 4.22e-21 | 1 |
subdivision of organism along appendicular axis | 4.22e-21 | 1 |
appendage girdle complex | 4.22e-21 | 1 |
leg | 4.22e-21 | 1 |
hindlimb | 4.22e-21 | 1 |
triceps surae | 4.22e-21 | 1 |
hindlimb zeugopod | 4.22e-21 | 1 |
posterior region of body | 4.22e-21 | 1 |
pelvic complex | 4.22e-21 | 1 |
limb field | 4.22e-21 | 1 |
hindlimb/pelvic fin field | 4.22e-21 | 1 |
muscle structure | 3.02e-11 | 2 |
muscle organ | 3.02e-11 | 2 |
neural tissue | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.52e-11 | 2 |
neurofibroma | 4.52e-11 | 2 |
neuroectodermal tumor | 7.07e-09 | 10 |
peripheral nervous system neoplasm | 8.29e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.