FFCP PHASE1:Hg19::chr15:41120932..41120960,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.23e-14;1!UBERON:0006242;1.84e-14;1 | |ontology_enrichment_development_v019=UBERON:0001045;1.23e-14;1!UBERON:0006242;1.84e-14;1 | ||
|ontology_enrichment_disease=DOID:305!8.47e-15!106;DOID:4929!2.60e-10!2;DOID:0050687!8.95e-10!143;DOID:299!1.46e-08!25 | |ontology_enrichment_disease=DOID:305!8.47e-15!106;DOID:4929!2.60e-10!2;DOID:0050687!8.95e-10!143;DOID:299!1.46e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.03e-08;2!DOID:4468;8.60e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;7.03e-08;2!DOID:4468;8.60e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,7.52e-08,2;DOID:4468,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!3.60e-23!27;UBERON:0005409!1.75e-20!35;UBERON:0004921!1.88e-17!129;UBERON:0004185!1.88e-17!129;UBERON:0001007!1.90e-16!155;UBERON:0001555!1.90e-16!155;UBERON:0007026!1.90e-16!155;UBERON:0000059!3.84e-16!11;UBERON:0004119!1.35e-14!169;UBERON:0000925!1.35e-14!169;UBERON:0006595!1.35e-14!169;UBERON:0001155!5.56e-14!9;UBERON:0001737!8.46e-13!9;UBERON:0002294!3.46e-11!7;UBERON:0001173!3.46e-11!7;UBERON:0004912!3.46e-11!7;UBERON:0000077!5.43e-10!130;UBERON:0004907!1.50e-09!5;UBERON:0009497!1.74e-08!25;UBERON:0000015!1.74e-08!25;UBERON:0002423!1.74e-08!25;UBERON:0006235!1.74e-08!25;UBERON:0004161!1.74e-08!25;UBERON:0002108!4.32e-08!14;UBERON:0000481!4.76e-08!347;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3;UBERON:0009854!5.67e-07!23;UBERON:0003929!6.17e-07!54;UBERON:0000063!9.49e-07!97 | |ontology_enrichment_uberon=UBERON:0000160!3.60e-23!27;UBERON:0005409!1.75e-20!35;UBERON:0004921!1.88e-17!129;UBERON:0004185!1.88e-17!129;UBERON:0001007!1.90e-16!155;UBERON:0001555!1.90e-16!155;UBERON:0007026!1.90e-16!155;UBERON:0000059!3.84e-16!11;UBERON:0004119!1.35e-14!169;UBERON:0000925!1.35e-14!169;UBERON:0006595!1.35e-14!169;UBERON:0001155!5.56e-14!9;UBERON:0001737!8.46e-13!9;UBERON:0002294!3.46e-11!7;UBERON:0001173!3.46e-11!7;UBERON:0004912!3.46e-11!7;UBERON:0000077!5.43e-10!130;UBERON:0004907!1.50e-09!5;UBERON:0009497!1.74e-08!25;UBERON:0000015!1.74e-08!25;UBERON:0002423!1.74e-08!25;UBERON:0006235!1.74e-08!25;UBERON:0004161!1.74e-08!25;UBERON:0002108!4.32e-08!14;UBERON:0000481!4.76e-08!347;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3;UBERON:0009854!5.67e-07!23;UBERON:0003929!6.17e-07!54;UBERON:0000063!9.49e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.00e-46;17!UBERON:0005409;1.89e-36;22!UBERON:0000059;2.50e-30;11!UBERON:0002108;7.39e-25;4!UBERON:0001155;3.93e-24;9!UBERON:0004921;9.64e-23;33!UBERON:0001154;1.23e-14;1!UBERON:0001153;1.23e-14;1!UBERON:0009854;1.23e-14;1!UBERON:0004907;1.42e-11;5!UBERON:0001555;2.34e-09;54!UBERON:0001007;1.42e-08;81 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.00e-46;17!UBERON:0005409;1.89e-36;22!UBERON:0000059;2.50e-30;11!UBERON:0002108;7.39e-25;4!UBERON:0001155;3.93e-24;9!UBERON:0004921;9.64e-23;33!UBERON:0001154;1.23e-14;1!UBERON:0001153;1.23e-14;1!UBERON:0009854;1.23e-14;1!UBERON:0004907;1.42e-11;5!UBERON:0001555;2.34e-09;54!UBERON:0001007;1.42e-08;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-46,17;UBERON:0005409,3.54e-32,25;UBERON:0000059,2.50e-30,11;UBERON:0002108,7.39e-25,4;UBERON:0001155,3.93e-24,9;UBERON:0001154,1.23e-14,1;UBERON:0001153,1.23e-14,1;UBERON:0001045,1.23e-14,1;UBERON:0004907,1.42e-11,5;UBERON:0004921,4.00e-08,118;UBERON:0001007,5.41e-08,145;UBERON:0001555,5.41e-08,145;UBERON:0007026,5.41e-08,145;UBERON:0004119,3.92e-07,160;UBERON:0000925,3.92e-07,160;UBERON:0006595,3.92e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14425873296722,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95879369790977,0.282706142867882,0,18.9099766904916,14.4185830140443,50.1044718845573,0,0,0,0,0,0,0,0,0,0,37.5071219750858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,2.98834192635094,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.49730843868477,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,3.65263488203798,0.431855182437243,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56027642462766,0,0,0,0,0,0,0,0,0,0,29.7892250296666,20.1074795663641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9288588964928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14425873296722,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95879369790977,0.282706142867882,0,18.9099766904916,14.4185830140443,50.1044718845573,0,0,0,0,0,0,0,0,0,0,37.5071219750858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,2.98834192635094,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.49730843868477,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,3.65263488203798,0.431855182437243,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56027642462766,0,0,0,0,0,0,0,0,0,0,29.7892250296666,20.1074795663641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9288588964928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p2@PPP1R14D | |short_description=p2@PPP1R14D | ||
}} | }} |
Revision as of 22:05, 19 November 2012
Short description: | p2@PPP1R14D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PPP1R14D_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -25bp_to_ENST00000299174, ENST00000427255, NM_001130143, NM_017726, uc001zmy.2, uc001zmz.2_5end |
EntrezGene: | PPP1R14D |
HGNC: | 14953 |
UniProt: | Q9NXH3E9PAT1Q4V755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.00e-46 | 17 |
gastrointestinal system | 3.54e-32 | 25 |
large intestine | 2.50e-30 | 11 |
small intestine | 7.39e-25 | 4 |
colon | 3.93e-24 | 9 |
vermiform appendix | 1.23e-14 | 1 |
caecum | 1.23e-14 | 1 |
midgut | 1.23e-14 | 1 |
lower digestive tract | 1.42e-11 | 5 |
subdivision of digestive tract | 4.00e-08 | 118 |
digestive system | 5.41e-08 | 145 |
digestive tract | 5.41e-08 | 145 |
primitive gut | 5.41e-08 | 145 |
endoderm-derived structure | 3.92e-07 | 160 |
endoderm | 3.92e-07 | 160 |
presumptive endoderm | 3.92e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.52e-08 | 2 |
clear cell adenocarcinoma | 8.04e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.