FFCP PHASE1:Hg19::chr10:54215046..54215061,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!7.02e-23!254;CL:0002076!6.19e-15!43;CL:0000223!1.28e-12!59;CL:0002251!1.41e-10!21;CL:0000076!6.65e-10!62;CL:0002620!1.72e-08!23 | |ontology_enrichment_celltype=CL:0000066!7.02e-23!254;CL:0002076!6.19e-15!43;CL:0000223!1.28e-12!59;CL:0002251!1.41e-10!21;CL:0000076!6.65e-10!62;CL:0002620!1.72e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002251;5.73e-14;20!CL:0002076;2.66e-10;42!CL:0002231;4.96e-10;3!CL:0002327;4.86e-07;4!CL:0000243;8.54e-07;15!CL:0000125;8.54e-07;15 | |ontology_enrichment_celltype_v019=CL:0002251;5.73e-14;20!CL:0002076;2.66e-10;42!CL:0002231;4.96e-10;3!CL:0002327;4.86e-07;4!CL:0000243;8.54e-07;15!CL:0000125;8.54e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.35e-15,253;CL:0002251,6.27e-14,20;CL:0002076,2.11e-11,42;CL:0000076,1.49e-10,63;CL:0002231,3.99e-10,3;CL:0000223,5.26e-10,58;CL:0002327,3.77e-07,4;CL:0000243,8.68e-07,15;CL:0000125,8.68e-07,15;CL:0000030,8.68e-07,15;CL:0000339,8.68e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.54e-07;15 | |ontology_enrichment_development_v019=CL:0000339;8.54e-07;15 | ||
|ontology_enrichment_disease=DOID:1749!6.69e-22!14;DOID:305!1.53e-16!106;DOID:0050687!9.25e-12!143;DOID:14566!2.17e-10!239;DOID:7!1.22e-09!39;DOID:162!5.22e-09!235;DOID:299!5.53e-07!25 | |ontology_enrichment_disease=DOID:1749!6.69e-22!14;DOID:305!1.53e-16!106;DOID:0050687!9.25e-12!143;DOID:14566!2.17e-10!239;DOID:7!1.22e-09!39;DOID:162!5.22e-09!235;DOID:299!5.53e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.36e-31;14!DOID:299;6.95e-09;25!DOID:5093;5.04e-08;4!DOID:1612;5.04e-08;4!DOID:4074;2.49e-07;2!DOID:4905;2.49e-07;2!DOID:3498;2.49e-07;2!DOID:7;3.47e-07;39 | |ontology_enrichment_disease_v019=DOID:1749;1.36e-31;14!DOID:299;6.95e-09;25!DOID:5093;5.04e-08;4!DOID:1612;5.04e-08;4!DOID:4074;2.49e-07;2!DOID:4905;2.49e-07;2!DOID:3498;2.49e-07;2!DOID:7;3.47e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.19e-31,14;DOID:305,3.33e-15,106;DOID:14566,2.06e-13,239;DOID:0050687,2.09e-12,143;DOID:162,5.21e-12,235;DOID:7,1.97e-09,39;DOID:299,6.41e-09,25;DOID:5093,4.98e-08,4;DOID:1612,4.98e-08,4;DOID:4074,2.30e-07,2;DOID:4905,2.30e-07,2;DOID:3498,2.30e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.34e-12!12;UBERON:0003729!2.38e-10!5;UBERON:0003102!3.96e-09!95;UBERON:0003343!6.27e-09!4;UBERON:0004785!6.27e-09!4;UBERON:0002097!1.40e-08!40;UBERON:0004119!1.21e-07!169;UBERON:0000925!1.21e-07!169;UBERON:0006595!1.21e-07!169;UBERON:0001007!1.97e-07!155;UBERON:0001555!1.97e-07!155;UBERON:0007026!1.97e-07!155;UBERON:0002199!3.62e-07!45;UBERON:0002416!3.62e-07!45 | |ontology_enrichment_uberon=UBERON:0000344!2.34e-12!12;UBERON:0003729!2.38e-10!5;UBERON:0003102!3.96e-09!95;UBERON:0003343!6.27e-09!4;UBERON:0004785!6.27e-09!4;UBERON:0002097!1.40e-08!40;UBERON:0004119!1.21e-07!169;UBERON:0000925!1.21e-07!169;UBERON:0006595!1.21e-07!169;UBERON:0001007!1.97e-07!155;UBERON:0001555!1.97e-07!155;UBERON:0007026!1.97e-07!155;UBERON:0002199!3.62e-07!45;UBERON:0002416!3.62e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000344;3.34e-17;20!UBERON:0003343;6.23e-14;4!UBERON:0004785;6.23e-14;4!UBERON:0003729;3.59e-11;13!UBERON:0003350;1.73e-09;8!UBERON:0000974;2.79e-09;6!UBERON:0003929;2.32e-07;7!UBERON:0001911;4.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000344;3.34e-17;20!UBERON:0003343;6.23e-14;4!UBERON:0004785;6.23e-14;4!UBERON:0003729;3.59e-11;13!UBERON:0003350;1.73e-09;8!UBERON:0000974;2.79e-09;6!UBERON:0003929;2.32e-07;7!UBERON:0001911;4.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.01e-17,20;UBERON:0003343,6.34e-14,4;UBERON:0004785,6.34e-14,4;UBERON:0003729,3.99e-11,13;UBERON:0003102,1.33e-09,99;UBERON:0003350,1.83e-09,8;UBERON:0000076,5.47e-09,8;UBERON:0000161,1.84e-08,36;UBERON:0001046,3.35e-07,19;UBERON:0001911,3.77e-07,4;UBERON:0005333,3.77e-07,4;UBERON:0008425,3.77e-07,4;UBERON:0005311,3.77e-07,4 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35497506324334,0.213557388818567,0,0.300091096084402,0.103052529238439,3.86460810068444,0.930584281657949,1.5189869901714,7.2103383819287,0.252433774244115,0,0,2.84007674013291,7.2541510723901,1.01736355386293,1.35282597214308,4.09119180886252,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22413289073352,0,0.548751427043128,1.1240175325762,3.31745608958382,1.11106134190236,0,0,0,3.014190529352,0,0,0,0,15.0138835612262,9.4433477830436,0,0,0,0,0,0.141775097242386,1.25381931783988,1.74380363108377,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,11.1190693624292,1.80455823272956,5.0644543914743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.865999014529609,0.670302275535787,0,0,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,9.06648799129817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9712432326576,0,10.8010864357067,0,0,0,0,0,0,0,0,0,0,0,0,0,50.213923108558,0,0,0.179736702294654,0,0,0,0,0,0,0,0,6.51069402713083,0,0,16.158669656541,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,10.7356283094525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89471500037586,0,0,0,0,0,0,0,0,0,0,0,7.43525551941941,5.58394872928413,0,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,1.38674673013139,0,8.62333097246523,0.0870592065804026,0,0,0.19351266257817,0,0.246346371159628,0,0,0,0,0,0,3.12882212375685,0,0,0,0,12.9426353667485,0,0,0,0,52.0513109261942,28.7657827358916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72760594037872,0,0,0.105600336519406,0,1.53532157855556,0,0,0,0,0,0.653174720218818,1.19730191562487,0,3.74853647927928,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,50.4289593638444,0,0,0,0,0,0,0,0,0,0,0,0,29.7453370949814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01958433241968,0.489473409012935,11.4616858292152,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,105.233437432596,0,0,0,0,0,0.839277046316667,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7276914187061,14.5102759717721,5.31942935712869,35.9284821727552,0,0,0,0,0,0,0,1.31017534008077,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,25.1382968276076,0,0,2.5224494698241,0,2.37520350340484,0,0,0,0,0,0,0,0,0,0,20.2347721249267,10.4812487853764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,3.57107877211315,17.9976384575003,8.90679170249768,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,1.13964576055364,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000435813,p1@uc001jjs.2 | |short_description=p1@ENST00000435813,p1@uc001jjs.2 | ||
}} | }} |
Revision as of 20:59, 18 November 2012
Short description: | p1@ENST00000435813, p1@uc001jjs.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000435813_5end, CAGE_peak_1_at_uc001jjs.2_5end |
Coexpression cluster: | C1315_mucinous_astrocytoma_malignant_glioblastoma_oral_gastric_medulloblastoma |
Association with transcript: | -14bp_to_ENST00000435813, uc001jjs.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.35e-15 | 253 |
epithelial cell of alimentary canal | 6.27e-14 | 20 |
endo-epithelial cell | 2.11e-11 | 42 |
squamous epithelial cell | 1.49e-10 | 63 |
epithelial cell of prostate | 3.99e-10 | 3 |
endodermal cell | 5.26e-10 | 58 |
mammary gland epithelial cell | 3.77e-07 | 4 |
glial cell (sensu Vertebrata) | 8.68e-07 | 15 |
glial cell | 8.68e-07 | 15 |
glioblast | 8.68e-07 | 15 |
glioblast (sensu Vertebrata) | 8.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.01e-17 | 20 |
mucosa of oral region | 6.34e-14 | 4 |
respiratory system mucosa | 6.34e-14 | 4 |
mouth mucosa | 3.99e-11 | 13 |
surface structure | 1.33e-09 | 99 |
epithelium of mucosa | 1.83e-09 | 8 |
external ectoderm | 5.47e-09 | 8 |
orifice | 1.84e-08 | 36 |
hindgut | 3.35e-07 | 19 |
mammary gland | 3.77e-07 | 4 |
mammary bud | 3.77e-07 | 4 |
mammary ridge | 3.77e-07 | 4 |
mammary placode | 3.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.19e-31 | 14 |
carcinoma | 3.33e-15 | 106 |
disease of cellular proliferation | 2.06e-13 | 239 |
cell type cancer | 2.09e-12 | 143 |
cancer | 5.21e-12 | 235 |
disease of anatomical entity | 1.97e-09 | 39 |
adenocarcinoma | 6.41e-09 | 25 |
thoracic cancer | 4.98e-08 | 4 |
breast cancer | 4.98e-08 | 4 |
pancreas adenocarcinoma | 2.30e-07 | 2 |
pancreatic carcinoma | 2.30e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.30e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.