FFCP PHASE1:Hg19::chr10:8100691..8100732,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!3.31e-08!25;CL:0000827!3.31e-08!25;CL:0000791!3.00e-07!18;CL:0000789!3.00e-07!18;CL:0002420!3.00e-07!18;CL:0002419!3.00e-07!18;CL:0000790!3.00e-07!18;CL:0002327!5.32e-07!4 | |ontology_enrichment_celltype=CL:0000084!3.31e-08!25;CL:0000827!3.31e-08!25;CL:0000791!3.00e-07!18;CL:0000789!3.00e-07!18;CL:0002420!3.00e-07!18;CL:0002419!3.00e-07!18;CL:0000790!3.00e-07!18;CL:0002327!5.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.17e-22;19!CL:0002541;3.47e-12;3!CL:0002577;1.02e-11;3!CL:0002536;6.42e-09;2!CL:0002327;8.06e-09;4!CL:0002537;1.78e-07;5!CL:0000333;3.02e-07;5!CL:0000312;9.03e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;5.17e-22;19!CL:0002541;3.47e-12;3!CL:0002577;1.02e-11;3!CL:0002536;6.42e-09;2!CL:0002327;8.06e-09;4!CL:0002537;1.78e-07;5!CL:0000333;3.02e-07;5!CL:0000312;9.03e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.00e-22,19;CL:0002541,3.41e-12,3;CL:0002577,1.37e-11,3;CL:0002536,6.31e-09,2;CL:0002327,7.65e-09,4;CL:0002537,1.79e-07,5;CL:0000312,8.86e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!4.94e-08!4;DOID:1612!4.94e-08!4 | |ontology_enrichment_disease=DOID:5093!4.94e-08!4;DOID:1612!4.94e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.29e-16;4!DOID:1612;2.29e-16;4 | |ontology_enrichment_disease_v019=DOID:5093;2.29e-16;4!DOID:1612;2.29e-16;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.34e-16,4;DOID:1612,2.34e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.92e-16!14;UBERON:0000158!2.92e-16!14;UBERON:0003124!6.27e-12!7;UBERON:0000478!2.90e-09!24;UBERON:0001008!1.38e-07!45;UBERON:0001987!2.30e-07!4;UBERON:0004340!2.30e-07!4;UBERON:0001911!5.32e-07!4;UBERON:0005333!5.32e-07!4;UBERON:0008425!5.32e-07!4;UBERON:0005311!5.32e-07!4;UBERON:0006554!7.05e-07!44 | |ontology_enrichment_uberon=UBERON:0005631!2.92e-16!14;UBERON:0000158!2.92e-16!14;UBERON:0003124!6.27e-12!7;UBERON:0000478!2.90e-09!24;UBERON:0001008!1.38e-07!45;UBERON:0001987!2.30e-07!4;UBERON:0004340!2.30e-07!4;UBERON:0001911!5.32e-07!4;UBERON:0005333!5.32e-07!4;UBERON:0008425!5.32e-07!4;UBERON:0005311!5.32e-07!4;UBERON:0006554!7.05e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.40e-23;10!UBERON:0000158;1.40e-23;10!UBERON:0000478;4.04e-20;24!UBERON:0001987;6.25e-15;4!UBERON:0000305;9.33e-14;7!UBERON:0003124;3.47e-12;3!UBERON:0000920;3.47e-12;3!UBERON:0001911;8.06e-09;4!UBERON:0000013;3.02e-07;5!UBERON:0002410;3.02e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.40e-23;10!UBERON:0000158;1.40e-23;10!UBERON:0000478;4.04e-20;24!UBERON:0001987;6.25e-15;4!UBERON:0000305;9.33e-14;7!UBERON:0003124;3.47e-12;3!UBERON:0000920;3.47e-12;3!UBERON:0001911;8.06e-09;4!UBERON:0000013;3.02e-07;5!UBERON:0002410;3.02e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.91e-36,14;UBERON:0000158,1.91e-36,14;UBERON:0003124,2.82e-25,7;UBERON:0000478,4.43e-20,24;UBERON:0001987,7.78e-15,4;UBERON:0004340,7.78e-15,4;UBERON:0000305,9.23e-14,7;UBERON:0000920,3.41e-12,3;UBERON:0004871,5.41e-12,8;UBERON:0001008,1.89e-09,48;UBERON:0001911,7.65e-09,4;UBERON:0005333,7.65e-09,4;UBERON:0008425,7.65e-09,4;UBERON:0005311,7.65e-09,4;UBERON:0006554,3.23e-08,47;UBERON:0000013,2.99e-07,5;UBERON:0002410,2.99e-07,5 | |||
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| ||
|short_description=p5@GATA3 | |short_description=p5@GATA3 | ||
}} | }} |
Revision as of 16:42, 17 November 2012
Short description: | p5@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GATA3_5end |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | 329bp_to_ENST00000461472_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.00e-22 | 19 |
chorionic membrane mesenchymal stem cell | 3.41e-12 | 3 |
placental epithelial cell | 1.37e-11 | 3 |
amniotic epithelial cell | 6.31e-09 | 2 |
mammary gland epithelial cell | 7.65e-09 | 4 |
amnion mesenchymal stem cell | 1.79e-07 | 5 |
keratinocyte | 8.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.91e-36 | 14 |
membranous layer | 1.91e-36 | 14 |
chorion | 2.82e-25 | 7 |
extraembryonic structure | 4.43e-20 | 24 |
placenta | 7.78e-15 | 4 |
allantois | 7.78e-15 | 4 |
amnion | 9.23e-14 | 7 |
egg chorion | 3.41e-12 | 3 |
somatic layer of lateral plate mesoderm | 5.41e-12 | 8 |
renal system | 1.89e-09 | 48 |
mammary gland | 7.65e-09 | 4 |
mammary bud | 7.65e-09 | 4 |
mammary ridge | 7.65e-09 | 4 |
mammary placode | 7.65e-09 | 4 |
urinary system structure | 3.23e-08 | 47 |
sympathetic nervous system | 2.99e-07 | 5 |
autonomic nervous system | 2.99e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.34e-16 | 4 |
breast cancer | 2.34e-16 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.