FFCP PHASE1:Hg19::chr12:53625966..53626012,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.27e-10!254;CL:0000057!2.55e-08!75;CL:0002076!3.33e-08!43;CL:0000055!1.56e-07!180 | |ontology_enrichment_celltype=CL:0000066!1.27e-10!254;CL:0000057!2.55e-08!75;CL:0002076!3.33e-08!43;CL:0000055!1.56e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.63e-10,253;CL:0002076,7.51e-08,42;CL:0000057,1.03e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.03e-17!95;UBERON:0004119!1.26e-13!169;UBERON:0000925!1.26e-13!169;UBERON:0006595!1.26e-13!169;UBERON:0001007!1.72e-10!155;UBERON:0001555!1.72e-10!155;UBERON:0007026!1.72e-10!155;UBERON:0001004!4.26e-10!72;UBERON:0000165!1.40e-09!28;UBERON:0000930!1.40e-09!28;UBERON:0000475!2.12e-09!365;UBERON:0001444!2.98e-09!48;UBERON:0000161!3.08e-09!35;UBERON:0000077!1.17e-08!130;UBERON:0004923!4.82e-08!57;UBERON:0003104!9.06e-08!238;UBERON:0009142!9.06e-08!238;UBERON:0000481!1.55e-07!347;UBERON:0000468!1.71e-07!659;UBERON:0000166!1.77e-07!21;UBERON:0000078!2.70e-07!18;UBERON:0002097!3.38e-07!40;UBERON:0000064!7.21e-07!219 | |ontology_enrichment_uberon=UBERON:0003102!7.03e-17!95;UBERON:0004119!1.26e-13!169;UBERON:0000925!1.26e-13!169;UBERON:0006595!1.26e-13!169;UBERON:0001007!1.72e-10!155;UBERON:0001555!1.72e-10!155;UBERON:0007026!1.72e-10!155;UBERON:0001004!4.26e-10!72;UBERON:0000165!1.40e-09!28;UBERON:0000930!1.40e-09!28;UBERON:0000475!2.12e-09!365;UBERON:0001444!2.98e-09!48;UBERON:0000161!3.08e-09!35;UBERON:0000077!1.17e-08!130;UBERON:0004923!4.82e-08!57;UBERON:0003104!9.06e-08!238;UBERON:0009142!9.06e-08!238;UBERON:0000481!1.55e-07!347;UBERON:0000468!1.71e-07!659;UBERON:0000166!1.77e-07!21;UBERON:0000078!2.70e-07!18;UBERON:0002097!3.38e-07!40;UBERON:0000064!7.21e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.58e-10;28!UBERON:0007811;3.88e-07;52!UBERON:0000161;7.68e-07;19!UBERON:0000166;7.68e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000165;3.58e-10;28!UBERON:0007811;3.88e-07;52!UBERON:0000161;7.68e-07;19!UBERON:0000166;7.68e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.56e-16,99;UBERON:0004119,1.41e-14,160;UBERON:0000925,1.41e-14,160;UBERON:0006595,1.41e-14,160;UBERON:0001007,5.77e-11,145;UBERON:0001555,5.77e-11,145;UBERON:0007026,5.77e-11,145;UBERON:0000165,1.24e-10,29;UBERON:0000930,1.24e-10,29;UBERON:0001004,1.52e-10,74;UBERON:0000161,5.77e-10,36;UBERON:0004923,1.47e-09,66;UBERON:0001444,2.53e-09,49;UBERON:0000166,2.10e-08,22;UBERON:0000033,1.16e-07,56;UBERON:0000153,2.10e-07,62;UBERON:0007811,2.10e-07,62;UBERON:0002097,5.47e-07,41 | |||
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| ||
|short_description=p2@RARG | |short_description=p2@RARG | ||
}} | }} |
Revision as of 01:33, 17 November 2012
Short description: | p2@RARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RARG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546377, ENST00000546717, ENST00000549859, ENST00000550350_5end |
EntrezGene: | RARG |
HGNC: | 9866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.63e-10 | 253 |
endo-epithelial cell | 7.51e-08 | 42 |
fibroblast | 1.03e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.56e-16 | 99 |
endoderm-derived structure | 1.41e-14 | 160 |
endoderm | 1.41e-14 | 160 |
presumptive endoderm | 1.41e-14 | 160 |
digestive system | 5.77e-11 | 145 |
digestive tract | 5.77e-11 | 145 |
primitive gut | 5.77e-11 | 145 |
mouth | 1.24e-10 | 29 |
stomodeum | 1.24e-10 | 29 |
respiratory system | 1.52e-10 | 74 |
orifice | 5.77e-10 | 36 |
organ component layer | 1.47e-09 | 66 |
subdivision of head | 2.53e-09 | 49 |
oral opening | 2.10e-08 | 22 |
head | 1.16e-07 | 56 |
anterior region of body | 2.10e-07 | 62 |
craniocervical region | 2.10e-07 | 62 |
skin of body | 5.47e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.