FFCP PHASE1:Hg19::chr22:38004996..38005010,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.39e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.39e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-11!57;UBERON:0005068!3.58e-11!57;UBERON:0006241!3.58e-11!57;UBERON:0007135!3.58e-11!57;UBERON:0003075!1.35e-09!86;UBERON:0007284!1.35e-09!86;UBERON:0002346!6.02e-09!90;UBERON:0002616!1.06e-08!59;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0003080!2.60e-08!42;UBERON:0002780!6.23e-08!41;UBERON:0001890!6.23e-08!41;UBERON:0006240!6.23e-08!41;UBERON:0000153!6.49e-08!129;UBERON:0007811!6.49e-08!129;UBERON:0000033!7.29e-08!123;UBERON:0004121!7.38e-08!169;UBERON:0000073!8.06e-08!94;UBERON:0001016!8.06e-08!94;UBERON:0005743!1.30e-07!86;UBERON:0001017!1.60e-07!82;UBERON:0000924!1.62e-07!173;UBERON:0006601!1.62e-07!173;UBERON:0007023!3.99e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!3.58e-11!57;UBERON:0005068!3.58e-11!57;UBERON:0006241!3.58e-11!57;UBERON:0007135!3.58e-11!57;UBERON:0003075!1.35e-09!86;UBERON:0007284!1.35e-09!86;UBERON:0002346!6.02e-09!90;UBERON:0002616!1.06e-08!59;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0003080!2.60e-08!42;UBERON:0002780!6.23e-08!41;UBERON:0001890!6.23e-08!41;UBERON:0006240!6.23e-08!41;UBERON:0000153!6.49e-08!129;UBERON:0007811!6.49e-08!129;UBERON:0000033!7.29e-08!123;UBERON:0004121!7.38e-08!169;UBERON:0000073!8.06e-08!94;UBERON:0001016!8.06e-08!94;UBERON:0005743!1.30e-07!86;UBERON:0001017!1.60e-07!82;UBERON:0000924!1.62e-07!173;UBERON:0006601!1.62e-07!173;UBERON:0007023!3.99e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001894;5.21e-14;7!UBERON:0006947;4.95e-12;3!UBERON:0004054;4.95e-12;3!UBERON:0003296;9.21e-10;4!UBERON:0010133;9.21e-10;4!UBERON:0002784;9.21e-10;4!UBERON:0001905;1.92e-09;2!UBERON:0002757;1.92e-09;2!UBERON:0010134;1.92e-09;2!UBERON:0005408;1.92e-09;2!UBERON:0001899;1.92e-09;2!UBERON:0005904;3.89e-09;4!UBERON:0003135;7.21e-09;11!UBERON:0001875;1.39e-08;2!UBERON:0005162;1.39e-08;2!UBERON:0000122;1.39e-08;2!UBERON:0006514;1.39e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001894;5.21e-14;7!UBERON:0006947;4.95e-12;3!UBERON:0004054;4.95e-12;3!UBERON:0003296;9.21e-10;4!UBERON:0010133;9.21e-10;4!UBERON:0002784;9.21e-10;4!UBERON:0001905;1.92e-09;2!UBERON:0002757;1.92e-09;2!UBERON:0010134;1.92e-09;2!UBERON:0005408;1.92e-09;2!UBERON:0001899;1.92e-09;2!UBERON:0005904;3.89e-09;4!UBERON:0003135;7.21e-09;11!UBERON:0001875;1.39e-08;2!UBERON:0005162;1.39e-08;2!UBERON:0000122;1.39e-08;2!UBERON:0006514;1.39e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,2.43e-14,7;UBERON:0006222,2.43e-14,7;UBERON:0006947,1.61e-12,3;UBERON:0004054,1.61e-12,3;UBERON:0001049,3.40e-10,56;UBERON:0005068,3.40e-10,56;UBERON:0006241,3.40e-10,56;UBERON:0007135,3.40e-10,56;UBERON:0003296,5.25e-10,4;UBERON:0010133,5.25e-10,4;UBERON:0002784,5.57e-10,4;UBERON:0005904,1.70e-09,4;UBERON:0001905,1.95e-09,2;UBERON:0002757,1.95e-09,2;UBERON:0010134,1.95e-09,2;UBERON:0005408,1.95e-09,2;UBERON:0001899,1.95e-09,2;UBERON:0003135,4.43e-09,11;UBERON:0005162,5.53e-09,2;UBERON:0000122,5.53e-09,2;UBERON:0001875,1.46e-08,2;UBERON:0006514,1.46e-08,2;UBERON:0003075,3.50e-08,82;UBERON:0007284,3.50e-08,82;UBERON:0004111,4.58e-08,240;UBERON:0007023,6.85e-08,114;UBERON:0000073,7.30e-08,53;UBERON:0002616,7.30e-08,53;UBERON:0002346,1.20e-07,86;UBERON:0000025,2.39e-07,192 | |||
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| ||
|short_description=p6@GGA1 | |short_description=p6@GGA1 | ||
}} | }} |
Revision as of 00:48, 17 November 2012
Short description: | p6@GGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_GGA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 12bp_to_ENST00000453208_5end |
EntrezGene: | GGA1 |
HGNC: | 17842 |
UniProt: | B0QYS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
diencephalon | 2.43e-14 | 7 |
future diencephalon | 2.43e-14 | 7 |
male genital duct | 1.61e-12 | 3 |
internal male genitalia | 1.61e-12 | 3 |
neural tube | 3.40e-10 | 56 |
neural rod | 3.40e-10 | 56 |
future spinal cord | 3.40e-10 | 56 |
neural keel | 3.40e-10 | 56 |
gland of diencephalon | 5.25e-10 | 4 |
neuroendocrine gland | 5.25e-10 | 4 |
regional part of diencephalon | 5.57e-10 | 4 |
duct of male reproductive system | 1.70e-09 | 4 |
pineal body | 1.95e-09 | 2 |
regional part of epithalamus | 1.95e-09 | 2 |
secretory circumventricular organ | 1.95e-09 | 2 |
circumventricular organ | 1.95e-09 | 2 |
epithalamus | 1.95e-09 | 2 |
male reproductive organ | 4.43e-09 | 11 |
multi cell component structure | 5.53e-09 | 2 |
neuron projection bundle | 5.53e-09 | 2 |
globus pallidus | 1.46e-08 | 2 |
pallidum | 1.46e-08 | 2 |
neural plate | 3.50e-08 | 82 |
presumptive neural plate | 3.50e-08 | 82 |
anatomical conduit | 4.58e-08 | 240 |
adult organism | 6.85e-08 | 114 |
regional part of nervous system | 7.30e-08 | 53 |
regional part of brain | 7.30e-08 | 53 |
neurectoderm | 1.20e-07 | 86 |
tube | 2.39e-07 | 192 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.